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Carg21265 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21265
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCox19-like CHCH family protein
Genome locationCarg_Chr15:9007820..9008675
RNA-Seq ExpressionCarg21265
SyntenyCarg21265
Gene Ontology termsNA
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042698.1 Cox19-like CHCH family protein [Cucumis melo var. makuwa]3.7e-1883.05Show/hide
Query:  MGEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVIS---KKFSLADEEQTK
        M EP+ QPVCAQEAL+LLNCVTESPFDQ KCYRLLHSLRECV+S   KKFSLA+EEQTK
Subjt:  MGEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVIS---KKFSLADEEQTK
KAF5734209.1 hypothetical protein HS088_TW16G00654 [Tripterygium wilfordii]9.3e-1473.21Show/hide
Query:  MGEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVIS---KKFSLADEE
        M E R++PVCAQEALDLLNCVT+SPFDQ+KC +LL+SLRECV++   KKFSLAD+E
Subjt:  MGEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVIS---KKFSLADEE
KAG6606053.1 hypothetical protein SDJN03_03370, partial [Cucurbita argyrosperma subsp. sororia]5.3e-1776.67Show/hide
Query:  MGEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVIS---KKFSLADEEQTKQ
        M + ++QPVCAQEALDLLNCVT+SPFDQ+KCYRLLHSLRECV+S   KKFSLADEE+ K+
Subjt:  MGEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVIS---KKFSLADEEQTKQ
KAG7017003.1 hypothetical protein SDJN02_22114, partial [Cucurbita argyrosperma subsp. argyrosperma]8.1e-34100Show/hide
Query:  RGIVYDSWLISAMGEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVISKKFSLADEEQTKQMKNA
        RGIVYDSWLISAMGEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVISKKFSLADEEQTKQMKNA
Subjt:  RGIVYDSWLISAMGEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVISKKFSLADEEQTKQMKNA
KGN50036.1 hypothetical protein Csa_000619 [Cucumis sativus]2.1e-1878.79Show/hide
Query:  MGEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVIS---KKFSLADEEQTKQM--KNA
        M EP+ QPVCAQEAL+LLNCVTESPFDQ+KCYRLLHSLRECV+S   KKFSLA+EEQTK +  KNA
Subjt:  MGEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVIS---KKFSLADEEQTKQM--KNA
TrEMBL top hitse value%identityAlignment
A0A0A0KQS7 Uncharacterized protein1.0e-1878.79Show/hide
Query:  MGEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVIS---KKFSLADEEQTKQM--KNA
        M EP+ QPVCAQEAL+LLNCVTESPFDQ+KCYRLLHSLRECV+S   KKFSLA+EEQTK +  KNA
Subjt:  MGEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVIS---KKFSLADEEQTKQM--KNA
A0A314V446 Uncharacterized protein3.8e-1370.18Show/hide
Query:  MGEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVIS---KKFSLADEEQ
        MG+ R + VC QEALDLLNCVT+SPFDQ+KC  LL+SLRECV++   KKFSLAD+EQ
Subjt:  MGEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVIS---KKFSLADEEQ
A0A5D3C4E2 Cox19-like CHCH family protein1.8e-1883.05Show/hide
Query:  MGEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVIS---KKFSLADEEQTK
        M EP+ QPVCAQEAL+LLNCVTESPFDQ KCYRLLHSLRECV+S   KKFSLA+EEQTK
Subjt:  MGEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVIS---KKFSLADEEQTK
A0A5N6R867 Uncharacterized protein2.9e-1371.43Show/hide
Query:  GEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVIS---KKFSLADEEQ
        G  +SQPVCAQEALDLLNCV +SP+DQ KC RLL SLRECV++   KKFSLAD+ Q
Subjt:  GEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVIS---KKFSLADEEQ
A0A7J7CJI7 Uncharacterized protein4.5e-1473.21Show/hide
Query:  MGEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVIS---KKFSLADEE
        M E R++PVCAQEALDLLNCVT+SPFDQ+KC +LL+SLRECV++   KKFSLAD+E
Subjt:  MGEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVIS---KKFSLADEE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G23760.1 Cox19-like CHCH family protein2.6e-1455.56Show/hide
Query:  ISAMGEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVIS---KKFSLADEEQTKQ
        I +M +  +QP+C QEAL LLNCV ESPFDQ+KC R L SLRECV+S   KKFS+  ++   +
Subjt:  ISAMGEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVIS---KKFSLADEEQTKQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGCGGCATTGTTTACGATTCCTGGTTGATTTCCGCCATGGGTGAACCTCGATCTCAGCCGGTTTGCGCTCAGGAAGCTCTCGATTTGCTTAATTGCGTTACGGAATCTCC
CTTCGATCAACAGAAATGCTACCGTCTCCTTCATTCTTTGCGAGAATGCGTGATTAGCAAGAAGTTCTCTCTGGCTGATGAAGAACAAACAAAACAAATGAAGAATGCTT
GA
mRNA sequenceShow/hide mRNA sequence
CGCGGCATTGTTTACGATTCCTGGTTGATTTCCGCCATGGGTGAACCTCGATCTCAGCCGGTTTGCGCTCAGGAAGCTCTCGATTTGCTTAATTGCGTTACGGAATCTCC
CTTCGATCAACAGAAATGCTACCGTCTCCTTCATTCTTTGCGAGAATGCGTGATTAGCAAGAAGTTCTCTCTGGCTGATGAAGAACAAACAAAACAAATGAAGAATGCTT
GAAGGAATTTTGTAAGAGAAGGATATTGTTCATCTTAAAGTAAGTTCTGTTGTTGATTGTATTTGAAGTTTCCATTTCTAGGAGATATTTATACCTTTCCTTCCAATTAC
TGAGAATTGAATTATAACTTGTTTCATTTATAATTTTAAGTGTAGGGATCAAATAGACACAAACCTCAAAAACCTCAAATCTTAGAGAGATTTATCAAAAATAGGCATAA
GCATTAAACAGCAAGCATTCAAATTAGAGGTTTGAAAGTTTGTAGTCCAAAAAGATAGTCTGCATTATGATTGCATTCTTCTACATGTAAAGCTCAGTTCTTGACATTAA
ACCAGAAAGC
Protein sequenceShow/hide protein sequence
RGIVYDSWLISAMGEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVISKKFSLADEEQTKQMKNA