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Carg21323 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21323
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMitochondrial import inner membrane translocase subunit
Genome locationCarg_Chr15:9324408..9331967
RNA-Seq ExpressionCarg21323
SyntenyCarg21323
Gene Ontology termsGO:0045039 - protein insertion into mitochondrial inner membrane (biological process)
GO:0042719 - mitochondrial intermembrane space protein transporter complex (cellular component)
InterPro domainsIPR004217 - Tim10-like
IPR035427 - Tim10-like domain superfamily
IPR039238 - Mitochondrial import inner membrane translocase subunit Tim8/13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017060.1 Mitochondrial import inner membrane translocase subunit TIM13, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-53100Show/hide
Query:  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYI
        MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYI
Subjt:  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYI

Query:  EATGIVSRALFKTPH
        EATGIVSRALFKTPH
Subjt:  EATGIVSRALFKTPH

XP_004145880.1 mitochondrial import inner membrane translocase subunit Tim13 [Cucumis sativus]3.1e-3273.04Show/hide
Query:  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYI
        MDSFSSPSSGSS QFS NEFRDQLKTQLAQAYAEEFLE                            TLRVKCFDKCITKPGSSLSGSESSCISRCMERYI
Subjt:  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYI

Query:  EATGIVSRALFKTPH
        EAT IVSRALFKTPH
Subjt:  EATGIVSRALFKTPH

XP_022929052.1 mitochondrial import inner membrane translocase subunit TIM13-like isoform X6 [Cucurbita moschata]2.0e-3475.65Show/hide
Query:  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYI
        MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLE                            TLRVKCFDKCITKPGSSLSGSESSCISRCMERYI
Subjt:  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYI

Query:  EATGIVSRALFKTPH
        EATGIVSRALFKTPH
Subjt:  EATGIVSRALFKTPH

XP_023520535.1 mitochondrial import inner membrane translocase subunit Tim13 [Cucurbita pepo subsp. pepo]1.7e-3374.78Show/hide
Query:  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYI
        MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLE                            TLRVKCF KCITKPGSSLSGSESSCISRCMERYI
Subjt:  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYI

Query:  EATGIVSRALFKTPH
        EATGIVSRALFKTPH
Subjt:  EATGIVSRALFKTPH

XP_038906948.1 mitochondrial import inner membrane translocase subunit TIM13 [Benincasa hispida]8.3e-3373.91Show/hide
Query:  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYI
        MDSFSSPSSGSSSQFS NEFRDQLKTQLAQAYAEEFLE                            TLRVKCFDKCITKPGSSLSGSESSCISRCMERYI
Subjt:  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYI

Query:  EATGIVSRALFKTPH
        EAT IVSRALFKTPH
Subjt:  EATGIVSRALFKTPH

TrEMBL top hitse value%identityAlignment
A0A0A0KK66 Mitochondrial import inner membrane translocase subunit1.5e-3273.04Show/hide
Query:  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYI
        MDSFSSPSSGSS QFS NEFRDQLKTQLAQAYAEEFLE                            TLRVKCFDKCITKPGSSLSGSESSCISRCMERYI
Subjt:  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYI

Query:  EATGIVSRALFKTPH
        EAT IVSRALFKTPH
Subjt:  EATGIVSRALFKTPH

A0A1S3AUN2 Mitochondrial import inner membrane translocase subunit1.5e-3273.04Show/hide
Query:  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYI
        MDSFSSPSSGSS QFS NEFRDQLKTQLAQAYAEEFLE                            TLRVKCFDKCITKPGSSLSGSESSCISRCMERYI
Subjt:  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYI

Query:  EATGIVSRALFKTPH
        EAT IVSRALFKTPH
Subjt:  EATGIVSRALFKTPH

A0A6J1DZZ6 Mitochondrial import inner membrane translocase subunit2.9e-3170.43Show/hide
Query:  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYI
        MDSFSSPSSG SSQFS +EF+DQLKTQLAQAYAEEFLE                            TLRVKCFDKCITKPGSSLSGSESSCISRCMERYI
Subjt:  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYI

Query:  EATGIVSRALFKTPH
        EAT IVS+ALFKTPH
Subjt:  EATGIVSRALFKTPH

A0A6J1ELP2 Mitochondrial import inner membrane translocase subunit9.5e-3575.65Show/hide
Query:  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYI
        MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLE                            TLRVKCFDKCITKPGSSLSGSESSCISRCMERYI
Subjt:  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYI

Query:  EATGIVSRALFKTPH
        EATGIVSRALFKTPH
Subjt:  EATGIVSRALFKTPH

A0A6J1I4K9 Mitochondrial import inner membrane translocase subunit9.5e-3575.65Show/hide
Query:  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYI
        MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLE                            TLRVKCFDKCITKPGSSLSGSESSCISRCMERYI
Subjt:  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYI

Query:  EATGIVSRALFKTPH
        EATGIVSRALFKTPH
Subjt:  EATGIVSRALFKTPH

SwissProt top hitse value%identityAlignment
Q6DGJ3 Mitochondrial import inner membrane translocase subunit Tim131.2e-0737.84Show/hide
Query:  MDSFSSP-SSGSSS-QFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMER
        M+ F S  SSGSSS +       +Q+K Q+A A A+E L+  T                             KCF KCI KPGS+L  SE  CI+ CM+R
Subjt:  MDSFSSP-SSGSSS-QFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMER

Query:  YIEATGIVSRA
        Y++A   VSRA
Subjt:  YIEATGIVSRA

Q8AVK1 Mitochondrial import inner membrane translocase subunit Tim13-B1.6e-0735.71Show/hide
Query:  MDSFSSPSS---GSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCME
        MD F S  S    SS +       +Q+K Q+A A A+E L+  T                             KCF KCI KPG SL  SE  C++ CM+
Subjt:  MDSFSSPSS---GSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCME

Query:  RYIEATGIVSRA
        RY++A  IVSRA
Subjt:  RYIEATGIVSRA

Q9XGY5 Mitochondrial import inner membrane translocase subunit Tim132.4e-1954.87Show/hide
Query:  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYI
        MDSFSS SSGS    +     DQ+K QLAQAYA+EFLE                            T+  KCF KC+TKPGSSLSGSESSCISRC++RYI
Subjt:  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYI

Query:  EATGIVSRALFKT
        EATGIVSRALF +
Subjt:  EATGIVSRALFKT

Q9XH48 Mitochondrial import inner membrane translocase subunit TIM132.0e-2153.57Show/hide
Query:  MDSFSS-PSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERY
        MDS+SS P  GS S  SP    + +KTQLAQAYAEE +E                            TLR KCFDKC+TKPGSSL GSESSCISRC+ERY
Subjt:  MDSFSS-PSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERY

Query:  IEATGIVSRALF
        +EAT I+SR+LF
Subjt:  IEATGIVSRALF

Q9Y5L4 Mitochondrial import inner membrane translocase subunit Tim132.8e-0736.45Show/hide
Query:  FSSPSSGS-SSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEA
        F S   GS S +  P    +Q+K Q+A A A+E L+  T                             KCF KCI KPG SL  SE  CI+ CM+RY++A
Subjt:  FSSPSSGS-SSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEA

Query:  TGIVSRA
           VSRA
Subjt:  TGIVSRA

Arabidopsis top hitse value%identityAlignment
AT1G61570.1 translocase of the inner mitochondrial membrane 131.4e-2253.57Show/hide
Query:  MDSFSS-PSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERY
        MDS+SS P  GS S  SP    + +KTQLAQAYAEE +E                            TLR KCFDKC+TKPGSSL GSESSCISRC+ERY
Subjt:  MDSFSS-PSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERY

Query:  IEATGIVSRALF
        +EAT I+SR+LF
Subjt:  IEATGIVSRALF

AT5G50810.1 translocase inner membrane subunit 83.5e-0550Show/hide
Query:  CFDKCITK-PGSSLSGSESSCISRCMERYIEATGIVSR
        C+DKCIT  PGS  S SESSC++ C +RY++ + I+ +
Subjt:  CFDKCITK-PGSSLSGSESSCISRCMERYIEATGIVSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCATTTTCATCGCCCTCAAGCGGTTCTTCTTCCCAATTTTCGCCCAACGAATTCAGGGACCAGCTCAAGACTCAGCTTGCTCAGGCGTACGCCGAGGAGTTTCT
TGAGGTTCAAACCCAAGTAATGCTCTTATATTTATTATCTTCCCTCAATTTGGGCAAATTTGAGTTACTAACTCGCACTTTCTCGCAGACCTTAAGAGTGAAGTGCTTTG
ACAAGTGCATCACAAAGCCAGGGTCAAGCCTAAGTGGGAGCGAGAGCAGTTGCATCTCCAGGTGCATGGAACGCTATATTGAGGCCACCGGCATCGTCAGTAGAGCCCTG
TTTAAGACACCACACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCATTTTCATCGCCCTCAAGCGGTTCTTCTTCCCAATTTTCGCCCAACGAATTCAGGGACCAGCTCAAGACTCAGCTTGCTCAGGCGTACGCCGAGGAGTTTCT
TGAGGTTCAAACCCAAGTAATGCTCTTATATTTATTATCTTCCCTCAATTTGGGCAAATTTGAGTTACTAACTCGCACTTTCTCGCAGACCTTAAGAGTGAAGTGCTTTG
ACAAGTGCATCACAAAGCCAGGGTCAAGCCTAAGTGGGAGCGAGAGCAGTTGCATCTCCAGGTGCATGGAACGCTATATTGAGGCCACCGGCATCGTCAGTAGAGCCCTG
TTTAAGACACCACACTGA
Protein sequenceShow/hide protein sequence
MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLEVQTQVMLLYLLSSLNLGKFELLTRTFSQTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATGIVSRAL
FKTPH