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Carg21341 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21341
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCP12 domain-containing protein
Genome locationCarg_Chr01:13238522..13238947
RNA-Seq ExpressionCarg21341
SyntenyCarg21341
Gene Ontology termsGO:0080153 - negative regulation of reductive pentose-phosphate cycle (biological process)
GO:0009507 - chloroplast (cellular component)
InterPro domainsIPR003823 - Domain of unknown function CP12
IPR039314 - Calvin cycle protein CP12-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608664.1 Calvin cycle protein CP12-3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]9.4e-71100Show/hide
Query:  SWSWSWPWPIQPSSSTSVRPSKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAWDQV
        SWSWSWPWPIQPSSSTSVRPSKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAWDQV
Subjt:  SWSWSWPWPIQPSSSTSVRPSKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAWDQV

Query:  EEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIYEE
        EEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIYEE
Subjt:  EEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIYEE

KAG7037981.1 Calvin cycle protein CP12-3, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-72100Show/hide
Query:  MAASWSWSWPWPIQPSSSTSVRPSKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAW
        MAASWSWSWPWPIQPSSSTSVRPSKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAW
Subjt:  MAASWSWSWPWPIQPSSSTSVRPSKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAW

Query:  DQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIYEE
        DQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIYEE
Subjt:  DQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIYEE

XP_022941081.1 calvin cycle protein CP12-3, chloroplastic [Cucurbita moschata]7.2e-7198.6Show/hide
Query:  MAASWSWS--WPWPIQPSSSTSVRPSKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKV
        MAASWSWS  WPWPIQPSSSTSVRPSKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKV
Subjt:  MAASWSWS--WPWPIQPSSSTSVRPSKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKV

Query:  AWDQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIYEE
        AWDQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIYEE
Subjt:  AWDQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIYEE

XP_022982015.1 calvin cycle protein CP12-3, chloroplastic [Cucurbita maxima]2.2e-6796.45Show/hide
Query:  MAASWSWSWPWPIQPSSSTSVRPSKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAW
        MAASWSWSWP P  PSSSTSVRP KGLQEKIAYLGLSVGSRKQGYQRERAMTVSM+KYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAW
Subjt:  MAASWSWSWPWPIQPSSSTSVRPSKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAW

Query:  DQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIYEE
        DQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIYEE
Subjt:  DQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIYEE

XP_023525595.1 calvin cycle protein CP12-3, chloroplastic [Cucurbita pepo subsp. pepo]1.9e-7198.58Show/hide
Query:  MAASWSWSWPWPIQPSSSTSVRPSKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAW
        MAASWSWSWPWP+QPSSSTSVRP KGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAW
Subjt:  MAASWSWSWPWPIQPSSSTSVRPSKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAW

Query:  DQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIYEE
        DQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIYEE
Subjt:  DQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIYEE

TrEMBL top hitse value%identityAlignment
A0A5N5NLS4 CP12 domain-containing protein1.5e-2674.7Show/hide
Query:  KYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIYEE
        KYKGT+MREK LTEMIE KV+EAKEVC+GDET  SDECKVAWD+VEEVSQAKA   R+L+ QDPLEY+C+DNP++DEC++YE+
Subjt:  KYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIYEE

A0A6J1DXW2 calvin cycle protein CP12-3, chloroplastic4.4e-3473.04Show/hide
Query:  LQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHLLRKLQTQDPLEYF
        L++K+ YL LS  S     Q  RAM ++  KYKYKGT+MREK LTEMIEKKVMEAKEVC+GDET  SDECKVAWD VEE+SQAKAH L KLQ QDPLEYF
Subjt:  LQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHLLRKLQTQDPLEYF

Query:  CRDNPQLDECQIYEE
        CRDNP LDECQIY+E
Subjt:  CRDNPQLDECQIYEE

A0A6J1FK63 calvin cycle protein CP12-3, chloroplastic3.5e-7198.6Show/hide
Query:  MAASWSWS--WPWPIQPSSSTSVRPSKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKV
        MAASWSWS  WPWPIQPSSSTSVRPSKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKV
Subjt:  MAASWSWS--WPWPIQPSSSTSVRPSKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKV

Query:  AWDQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIYEE
        AWDQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIYEE
Subjt:  AWDQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIYEE

A0A6J1J1E6 calvin cycle protein CP12-3, chloroplastic1.0e-6796.45Show/hide
Query:  MAASWSWSWPWPIQPSSSTSVRPSKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAW
        MAASWSWSWP P  PSSSTSVRP KGLQEKIAYLGLSVGSRKQGYQRERAMTVSM+KYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAW
Subjt:  MAASWSWSWPWPIQPSSSTSVRPSKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAW

Query:  DQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIYEE
        DQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIYEE
Subjt:  DQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQLDECQIYEE

A0A6P3YXB8 calvin cycle protein CP12-3, chloroplastic-like1.2e-2665.74Show/hide
Query:  LSVGSRKQGYQRERAM--TVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQL
        +SV  R +   R +A+    +MA  K+KGT+MREK LTEMIEKKV+EAKEVCKGD+T  SDECKVAWD+VEEVSQAKA L  KL+ QDPLE FC+DNP+ 
Subjt:  LSVGSRKQGYQRERAM--TVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHLLRKLQTQDPLEYFCRDNPQL

Query:  DECQIYEE
        DEC+IYE+
Subjt:  DECQIYEE

SwissProt top hitse value%identityAlignment
A6Q0K5 Calvin cycle protein CP12, chloroplastic3.4e-0741.56Show/hide
Query:  LTEMIEKKVMEAKEVC-KGDETSGSDECKVAWDQVEEVSQAKAH----LLRKLQTQDPLEYFCRDNPQLDECQIYEE
        L + ++  V EA++ C KG     S +C VAWD VEE+S A +H    +   +   DPLE FC+D P  DEC++YE+
Subjt:  LTEMIEKKVMEAKEVC-KGDETSGSDECKVAWDQVEEVSQAKAH----LLRKLQTQDPLEYFCRDNPQLDECQIYEE

O22914 Calvin cycle protein CP12-1, chloroplastic1.0e-1147.95Show/hide
Query:  LTEMIEKKVMEAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHL--LRKLQTQDPLEYFCRDNPQLDECQIYE
        ++E +EK + EAKE C  D  SG  EC  AWD+VEE+S A +H    +K    DPLE +C DNP+ DEC+ Y+
Subjt:  LTEMIEKKVMEAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHL--LRKLQTQDPLEYFCRDNPQLDECQIYE

Q9C9K2 Calvin cycle protein CP12-3, chloroplastic6.4e-2260.22Show/hide
Query:  MTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHLLRKLQ--TQDPLEYFCRDNPQLDECQIYEE
        M V+ A  KY GT+MRE+ L+EMIE+KV EA EVC+ +E   S+EC+VAWD+VEEVSQA+A L  KL+   QDPLE FC++NP+ DEC+IYE+
Subjt:  MTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHLLRKLQ--TQDPLEYFCRDNPQLDECQIYEE

Q9LZP9 Calvin cycle protein CP12-2, chloroplastic1.0e-1145.21Show/hide
Query:  LTEMIEKKVMEAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHL--LRKLQTQDPLEYFCRDNPQLDECQIYE
        +++++EK + EA+E C GD  SG  EC  AWD+VEE+S A +H    +K    DPLE +C+DNP+ +EC+ Y+
Subjt:  LTEMIEKKVMEAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHL--LRKLQTQDPLEYFCRDNPQLDECQIYE

Arabidopsis top hitse value%identityAlignment
AT1G76560.1 CP12 domain-containing protein 34.6e-2360.22Show/hide
Query:  MTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHLLRKLQ--TQDPLEYFCRDNPQLDECQIYEE
        M V+ A  KY GT+MRE+ L+EMIE+KV EA EVC+ +E   S+EC+VAWD+VEEVSQA+A L  KL+   QDPLE FC++NP+ DEC+IYE+
Subjt:  MTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHLLRKLQ--TQDPLEYFCRDNPQLDECQIYEE

AT2G47400.1 CP12 domain-containing protein 17.3e-1347.95Show/hide
Query:  LTEMIEKKVMEAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHL--LRKLQTQDPLEYFCRDNPQLDECQIYE
        ++E +EK + EAKE C  D  SG  EC  AWD+VEE+S A +H    +K    DPLE +C DNP+ DEC+ Y+
Subjt:  LTEMIEKKVMEAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHL--LRKLQTQDPLEYFCRDNPQLDECQIYE

AT3G62410.1 CP12 domain-containing protein 27.3e-1345.21Show/hide
Query:  LTEMIEKKVMEAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHL--LRKLQTQDPLEYFCRDNPQLDECQIYE
        +++++EK + EA+E C GD  SG  EC  AWD+VEE+S A +H    +K    DPLE +C+DNP+ +EC+ Y+
Subjt:  LTEMIEKKVMEAKEVCKGDETSGSDECKVAWDQVEEVSQAKAHL--LRKLQTQDPLEYFCRDNPQLDECQIYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCTCGTGGTCGTGGTCGTGGCCGTGGCCGATCCAACCTTCATCATCCACCTCTGTGAGACCGTCTAAGGGCCTTCAGGAGAAAATAGCGTATCTAGGGCTGAG
TGTCGGCAGCAGAAAACAGGGGTATCAGCGGGAGAGAGCAATGACTGTGAGCATGGCAAAATACAAATACAAAGGAACGCGGATGAGAGAGAAGCTTCTGACGGAGATGA
TTGAGAAGAAGGTGATGGAAGCAAAGGAGGTTTGCAAGGGGGACGAGACCTCAGGCTCTGATGAGTGCAAGGTGGCCTGGGACCAGGTGGAGGAGGTTAGCCAAGCTAAG
GCCCATCTCCTACGTAAACTACAGACTCAAGATCCCCTGGAGTATTTCTGTCGAGACAATCCTCAGCTTGACGAGTGTCAAATTTACGAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCTCGTGGTCGTGGTCGTGGCCGTGGCCGATCCAACCTTCATCATCCACCTCTGTGAGACCGTCTAAGGGCCTTCAGGAGAAAATAGCGTATCTAGGGCTGAG
TGTCGGCAGCAGAAAACAGGGGTATCAGCGGGAGAGAGCAATGACTGTGAGCATGGCAAAATACAAATACAAAGGAACGCGGATGAGAGAGAAGCTTCTGACGGAGATGA
TTGAGAAGAAGGTGATGGAAGCAAAGGAGGTTTGCAAGGGGGACGAGACCTCAGGCTCTGATGAGTGCAAGGTGGCCTGGGACCAGGTGGAGGAGGTTAGCCAAGCTAAG
GCCCATCTCCTACGTAAACTACAGACTCAAGATCCCCTGGAGTATTTCTGTCGAGACAATCCTCAGCTTGACGAGTGTCAAATTTACGAGGAATGA
Protein sequenceShow/hide protein sequence
MAASWSWSWPWPIQPSSSTSVRPSKGLQEKIAYLGLSVGSRKQGYQRERAMTVSMAKYKYKGTRMREKLLTEMIEKKVMEAKEVCKGDETSGSDECKVAWDQVEEVSQAK
AHLLRKLQTQDPLEYFCRDNPQLDECQIYEE