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Carg21345 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21345
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAT-rich interactive domain-containing protein 6
Genome locationCarg_Chr01:13223074..13226503
RNA-Seq ExpressionCarg21345
SyntenyCarg21345
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001606 - ARID DNA-binding domain
IPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone
IPR036431 - ARID DNA-binding domain superfamily
IPR045147 - AT-rich interactive domain-containing protein 3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608660.1 AT-rich interactive domain-containing protein 5, partial [Cucurbita argyrosperma subsp. sororia]1.9e-10266.35Show/hide
Query:  MQMAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEK
        ++MAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV                                 ALLEYEK
Subjt:  MQMAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEK

Query:  HKRLTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK----------------------------
        HKRLTGELQLPVGALPQSTNTEKE       TGYYQAPGSGRARRDAAARAMQGWHAQR+VGSGEDAEPIIK                            
Subjt:  HKRLTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK----------------------------

Query:  ------------------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAV
                                            NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAV
Subjt:  ------------------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAV

Query:  VSLHGRLFVRAPFEQGSM
        VSLHGRLFVRAPFEQGSM
Subjt:  VSLHGRLFVRAPFEQGSM

KAG7037977.1 AT-rich interactive domain-containing protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-123100Show/hide
Query:  MQMAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDVALLEYEKHKRLTGELQLPVGALPQSTNTEKEKSSFFVQTG
        MQMAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDVALLEYEKHKRLTGELQLPVGALPQSTNTEKEKSSFFVQTG
Subjt:  MQMAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDVALLEYEKHKRLTGELQLPVGALPQSTNTEKEKSSFFVQTG

Query:  YYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIKNDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQT
        YYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIKNDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQT
Subjt:  YYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIKNDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQT

Query:  SAVVSLHGRLFVRAPFEQGSM
        SAVVSLHGRLFVRAPFEQGSM
Subjt:  SAVVSLHGRLFVRAPFEQGSM

XP_022941346.1 AT-rich interactive domain-containing protein 6 isoform X1 [Cucurbita moschata]8.8e-10867.92Show/hide
Query:  MQMAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEK
        ++MAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV                                 ALLEYEK
Subjt:  MQMAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEK

Query:  HKRLTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK----------------------------
        HKRLTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQR+VG GEDAEPI+K                            
Subjt:  HKRLTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK----------------------------

Query:  ------------------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAV
                                            NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAV
Subjt:  ------------------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAV

Query:  VSLHGRLFVRAPFEQGSM
        VSLHGRLFVRAPFEQGSM
Subjt:  VSLHGRLFVRAPFEQGSM

XP_022941348.1 AT-rich interactive domain-containing protein 6 isoform X2 [Cucurbita moschata]1.2e-10165.72Show/hide
Query:  MQMAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEK
        ++MAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV                                 ALLEYEK
Subjt:  MQMAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEK

Query:  HKRLTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK----------------------------
        HKRLTGELQLPVGALPQSTNTEKE       TGYYQAPGSGRARRDAAARAMQGWHAQR+VG GEDAEPI+K                            
Subjt:  HKRLTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK----------------------------

Query:  ------------------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAV
                                            NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAV
Subjt:  ------------------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAV

Query:  VSLHGRLFVRAPFEQGSM
        VSLHGRLFVRAPFEQGSM
Subjt:  VSLHGRLFVRAPFEQGSM

XP_023525687.1 AT-rich interactive domain-containing protein 5 isoform X1 [Cucurbita pepo subsp. pepo]7.5e-10767.61Show/hide
Query:  MQMAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEK
        ++MAEGDESGTPEDRV FMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV                                 ALLEYEK
Subjt:  MQMAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEK

Query:  HKRLTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK----------------------------
        HKRLTGELQLPVG+LPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQR+VG GEDAEPIIK                            
Subjt:  HKRLTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK----------------------------

Query:  ------------------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAV
                                            NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAV
Subjt:  ------------------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAV

Query:  VSLHGRLFVRAPFEQGSM
        VSLHGRLFVRAPFEQGSM
Subjt:  VSLHGRLFVRAPFEQGSM

TrEMBL top hitse value%identityAlignment
A0A0L9VA28 Uncharacterized protein6.2e-8356.29Show/hide
Query:  QMAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEKH
        +M E DE GTP DR  FMKE+ENF+RER+LEFKPPKFYGEPLNCLKLW+AVIRLGGYDV                                 ALLEYEKH
Subjt:  QMAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEKH

Query:  KRLTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIKN----------------------------
        KR TGELQLPVGA  QS N EKE       T  YQAPGSGRARRDAAARAMQGWHAQR++G GE AEP  K+                            
Subjt:  KRLTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIKN----------------------------

Query:  -------------------------------------DCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAV
                                             DCFEVYALVPGLLREEVRVQSDP GRLVITG PE +DNPWGITPFKKVV+LP RIDPLQTSAV
Subjt:  -------------------------------------DCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAV

Query:  VSLHGRLFVRAPFEQGSM
        VSLHGRLFVR PFEQG++
Subjt:  VSLHGRLFVRAPFEQGSM

A0A5C7H4B7 Uncharacterized protein2.5e-8456.01Show/hide
Query:  QMAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEKH
        +M E D+SGTPE+RVEFMKE+E+F+RE +LEFKPPKFYGEPLNCLKLWRAVIRLGGY+V                                 ALLEYEKH
Subjt:  QMAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEKH

Query:  KRLTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK-----------------------------
        KRLTGELQLP  +  Q T+ EKE S        YQ PGSGRARRDAAARAMQGWHAQR++G GE  EPI+K                             
Subjt:  KRLTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK-----------------------------

Query:  -----------------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAVV
                                            DCFE+YALVPGLLREEVRVQSDPAGRLVITG+PE VDNPWGITPFKKVV LPTRI+PLQTSAVV
Subjt:  -----------------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAVV

Query:  SLHGRLFVRAPFEQGS
        SLHGRLFVR PFEQGS
Subjt:  SLHGRLFVRAPFEQGS

A0A6J1FKV6 AT-rich interactive domain-containing protein 6 isoform X14.3e-10867.92Show/hide
Query:  MQMAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEK
        ++MAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV                                 ALLEYEK
Subjt:  MQMAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEK

Query:  HKRLTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK----------------------------
        HKRLTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQR+VG GEDAEPI+K                            
Subjt:  HKRLTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK----------------------------

Query:  ------------------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAV
                                            NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAV
Subjt:  ------------------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAV

Query:  VSLHGRLFVRAPFEQGSM
        VSLHGRLFVRAPFEQGSM
Subjt:  VSLHGRLFVRAPFEQGSM

A0A6J1FRV5 AT-rich interactive domain-containing protein 6 isoform X26.0e-10265.72Show/hide
Query:  MQMAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEK
        ++MAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV                                 ALLEYEK
Subjt:  MQMAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEK

Query:  HKRLTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK----------------------------
        HKRLTGELQLPVGALPQSTNTEKE       TGYYQAPGSGRARRDAAARAMQGWHAQR+VG GEDAEPI+K                            
Subjt:  HKRLTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK----------------------------

Query:  ------------------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAV
                                            NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAV
Subjt:  ------------------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAV

Query:  VSLHGRLFVRAPFEQGSM
        VSLHGRLFVRAPFEQGSM
Subjt:  VSLHGRLFVRAPFEQGSM

A0A6J1J3M7 AT-rich interactive domain-containing protein 65.1e-10165.41Show/hide
Query:  MQMAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEK
        ++MAEGDESGTPEDRV FMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV                                 ALLEYEK
Subjt:  MQMAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEK

Query:  HKRLTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK----------------------------
        HKRLTGELQLPVG+LPQSTNTEKE       TGYYQAPGSGRARRDAAARAMQGWHAQR+VG GEDAEPIIK                            
Subjt:  HKRLTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK----------------------------

Query:  ------------------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAV
                                            NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAV
Subjt:  ------------------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAV

Query:  VSLHGRLFVRAPFEQGSM
        VSLHGRLFVRAPFEQGSM
Subjt:  VSLHGRLFVRAPFEQGSM

SwissProt top hitse value%identityAlignment
C0SUW7 AT-rich interactive domain-containing protein 67.1e-6847.54Show/hide
Query:  DESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEKHKRLTG
        DE+GTP ++V F++E+E F++E  LEFKPPKFYG+PLN LKLWRAV+ LGGY+V                                 ALLEYEK  R  G
Subjt:  DESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEKHKRLTG

Query:  ELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIKN---------------------------------
        EL LP   L  S++ EKE SS       +Q  GSGRARRD+AARAMQGWHAQR+VGSGE   P +K+                                 
Subjt:  ELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIKN---------------------------------

Query:  ---------------------------DCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAVVSLHGRLFVR
                                   D FE++ALVPGLLR+EVR+QSDPAG++VITGQPEQ+DNPWGITPFKK+V L  RIDPL TSAV+S+HGRLF+R
Subjt:  ---------------------------DCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAVVSLHGRLFVR

Query:  APFEQ
         PFEQ
Subjt:  APFEQ

Q0WNR6 AT-rich interactive domain-containing protein 55.1e-7451.47Show/hide
Query:  EGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEKHKRL
        E DE+G P+D+  F+KE+E F++E  LEFK PKFYG+PLNCLKLWRAVI+LGGYDV                                 ALLEYEKH R 
Subjt:  EGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEKHKRL

Query:  TGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK--------------------------------
         GEL LP  A   S+  EKE SS       +QA GSGR RRDAAARAMQGWH+QR++GSGE  EPI+K                                
Subjt:  TGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK--------------------------------

Query:  ----------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAVVSLHGRLF
                                     DCFE++ALVPGLLREEVRVQSDPAGRLVI GQPEQ+DNPWGITPFKKVV+ P RIDPL TSAVVSLHGRLF
Subjt:  ----------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAVVSLHGRLF

Query:  VRAPFEQ
        VR PFEQ
Subjt:  VRAPFEQ

Q940Y3 AT-rich interactive domain-containing protein 35.6e-6546.62Show/hide
Query:  AEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYD---------------------------------VALLEYEKHKR
        ++G+ESGT ED+  FMKE+++F RER ++FKPPKFYGE LNCLKLWRAV RLGGYD                                  ALLEYE+HK 
Subjt:  AEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYD---------------------------------VALLEYEKHKR

Query:  LTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIKN------------------------------
          GELQ+P+    +  N +             QA GSGRARRDAA+RAMQGWH+QR+ G+GE ++P IK+                              
Subjt:  LTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIKN------------------------------

Query:  ---------------------------------DCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAVVSLH
                                         DCFEVYALVPGL+REEVRVQSDPAGRLVI+G+PE   NPWG TPFKKVVSLPTRIDP  TSAVV+L+
Subjt:  ---------------------------------DCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAVVSLH

Query:  GRLFVRAPFEQ
        G+LFVR P EQ
Subjt:  GRLFVRAPFEQ

Arabidopsis top hitse value%identityAlignment
AT1G20910.1 ARID/BRIGHT DNA-binding domain-containing protein5.0e-6947.54Show/hide
Query:  DESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEKHKRLTG
        DE+GTP ++V F++E+E F++E  LEFKPPKFYG+PLN LKLWRAV+ LGGY+V                                 ALLEYEK  R  G
Subjt:  DESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEKHKRLTG

Query:  ELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIKN---------------------------------
        EL LP   L  S++ EKE SS       +Q  GSGRARRD+AARAMQGWHAQR+VGSGE   P +K+                                 
Subjt:  ELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIKN---------------------------------

Query:  ---------------------------DCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAVVSLHGRLFVR
                                   D FE++ALVPGLLR+EVR+QSDPAG++VITGQPEQ+DNPWGITPFKK+V L  RIDPL TSAV+S+HGRLF+R
Subjt:  ---------------------------DCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAVVSLHGRLFVR

Query:  APFEQ
         PFEQ
Subjt:  APFEQ

AT1G76510.1 ARID/BRIGHT DNA-binding domain-containing protein3.6e-7551.47Show/hide
Query:  EGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEKHKRL
        E DE+G P+D+  F+KE+E F++E  LEFK PKFYG+PLNCLKLWRAVI+LGGYDV                                 ALLEYEKH R 
Subjt:  EGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEKHKRL

Query:  TGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK--------------------------------
         GEL LP  A   S+  EKE SS       +QA GSGR RRDAAARAMQGWH+QR++GSGE  EPI+K                                
Subjt:  TGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK--------------------------------

Query:  ----------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAVVSLHGRLF
                                     DCFE++ALVPGLLREEVRVQSDPAGRLVI GQPEQ+DNPWGITPFKKVV+ P RIDPL TSAVVSLHGRLF
Subjt:  ----------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAVVSLHGRLF

Query:  VRAPFEQ
        VR PFEQ
Subjt:  VRAPFEQ

AT1G76510.2 ARID/BRIGHT DNA-binding domain-containing protein3.6e-7551.47Show/hide
Query:  EGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEKHKRL
        E DE+G P+D+  F+KE+E F++E  LEFK PKFYG+PLNCLKLWRAVI+LGGYDV                                 ALLEYEKH R 
Subjt:  EGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV---------------------------------ALLEYEKHKRL

Query:  TGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK--------------------------------
         GEL LP  A   S+  EKE SS       +QA GSGR RRDAAARAMQGWH+QR++GSGE  EPI+K                                
Subjt:  TGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK--------------------------------

Query:  ----------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAVVSLHGRLF
                                     DCFE++ALVPGLLREEVRVQSDPAGRLVI GQPEQ+DNPWGITPFKKVV+ P RIDPL TSAVVSLHGRLF
Subjt:  ----------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAVVSLHGRLF

Query:  VRAPFEQ
        VR PFEQ
Subjt:  VRAPFEQ

AT1G76510.3 ARID/BRIGHT DNA-binding domain-containing protein2.9e-7247.45Show/hide
Query:  EGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV--------------------------------------------
        E DE+G P+D+  F+KE+E F++E  LEFK PKFYG+PLNCLKLWRAVI+LGGYDV                                            
Subjt:  EGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDV--------------------------------------------

Query:  ------------ALLEYEKHKRLTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK---------
                    ALLEYEKH R  GEL LP  A   S+  EKE SS       +QA GSGR RRDAAARAMQGWH+QR++GSGE  EPI+K         
Subjt:  ------------ALLEYEKHKRLTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIK---------

Query:  ---------------------------------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKV
                                                            DCFE++ALVPGLLREEVRVQSDPAGRLVI GQPEQ+DNPWGITPFKKV
Subjt:  ---------------------------------------------------NDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKV

Query:  VSLPTRIDPLQTSAVVSLHGRLFVRAPFEQGSM
        V+ P RIDPL TSAVVSLHGRLFVR PFE   M
Subjt:  VSLPTRIDPLQTSAVVSLHGRLFVRAPFEQGSM

AT2G17410.2 ARID/BRIGHT DNA-binding domain-containing protein8.0e-6747.54Show/hide
Query:  AEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYD---------------------------------VALLEYEKHKR
        ++G+ESGT ED+  FMKE+++F RER ++FKPPKFYGE LNCLKLWRAV RLGGYD                                  ALLEYE+HK 
Subjt:  AEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYD---------------------------------VALLEYEKHKR

Query:  LTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIKN------------------------------
          GELQ+P+    +  N +             QA GSGRARRDAA+RAMQGWH+QR+ G+GE ++P IK+                              
Subjt:  LTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRARRDAAARAMQGWHAQRIVGSGEDAEPIIKN------------------------------

Query:  ---------------------------DCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAVVSLHGRLFVR
                                   DCFEVYALVPGL+REEVRVQSDPAGRLVI+G+PE   NPWG TPFKKVVSLPTRIDP  TSAVV+L+G+LFVR
Subjt:  ---------------------------DCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAVVSLHGRLFVR

Query:  APFEQ
         P EQ
Subjt:  APFEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGATGGCTGAGGGTGACGAATCGGGGACACCAGAGGATAGGGTGGAATTTATGAAGGAGATCGAAAATTTCCACAGGGAGAGGGCTTTGGAGTTTAAGCCTCCTAA
GTTTTATGGGGAGCCACTAAACTGCCTGAAGTTATGGAGAGCTGTTATTAGATTGGGAGGCTATGATGTGGCACTTTTAGAGTATGAAAAGCATAAAAGACTAACGGGGG
AACTGCAACTACCTGTTGGAGCCCTTCCTCAGTCTACAAATACAGAAAAGGAGAAATCCAGTTTCTTCGTCCAGACTGGCTACTATCAAGCTCCTGGCTCAGGTAGGGCT
CGAAGGGATGCTGCAGCTCGTGCCATGCAGGGTTGGCATGCACAGCGTATTGTTGGATCTGGCGAGGATGCTGAGCCTATAATAAAGAATGACTGCTTTGAAGTATATGC
ATTAGTTCCAGGGCTTTTACGAGAGGAGGTTCGGGTTCAATCCGATCCAGCTGGACGTCTGGTAATTACTGGTCAACCTGAGCAGGTTGATAATCCTTGGGGCATCACGC
CTTTTAAAAAGGTGGTGAGCTTACCCACAAGAATTGATCCTCTTCAGACATCTGCCGTGGTGAGCCTTCATGGCCGACTTTTTGTGCGAGCCCCTTTTGAGCAAGGATCC
ATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGATGGCTGAGGGTGACGAATCGGGGACACCAGAGGATAGGGTGGAATTTATGAAGGAGATCGAAAATTTCCACAGGGAGAGGGCTTTGGAGTTTAAGCCTCCTAA
GTTTTATGGGGAGCCACTAAACTGCCTGAAGTTATGGAGAGCTGTTATTAGATTGGGAGGCTATGATGTGGCACTTTTAGAGTATGAAAAGCATAAAAGACTAACGGGGG
AACTGCAACTACCTGTTGGAGCCCTTCCTCAGTCTACAAATACAGAAAAGGAGAAATCCAGTTTCTTCGTCCAGACTGGCTACTATCAAGCTCCTGGCTCAGGTAGGGCT
CGAAGGGATGCTGCAGCTCGTGCCATGCAGGGTTGGCATGCACAGCGTATTGTTGGATCTGGCGAGGATGCTGAGCCTATAATAAAGAATGACTGCTTTGAAGTATATGC
ATTAGTTCCAGGGCTTTTACGAGAGGAGGTTCGGGTTCAATCCGATCCAGCTGGACGTCTGGTAATTACTGGTCAACCTGAGCAGGTTGATAATCCTTGGGGCATCACGC
CTTTTAAAAAGGTGGTGAGCTTACCCACAAGAATTGATCCTCTTCAGACATCTGCCGTGGTGAGCCTTCATGGCCGACTTTTTGTGCGAGCCCCTTTTGAGCAAGGATCC
ATGTGA
Protein sequenceShow/hide protein sequence
MQMAEGDESGTPEDRVEFMKEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDVALLEYEKHKRLTGELQLPVGALPQSTNTEKEKSSFFVQTGYYQAPGSGRA
RRDAAARAMQGWHAQRIVGSGEDAEPIIKNDCFEVYALVPGLLREEVRVQSDPAGRLVITGQPEQVDNPWGITPFKKVVSLPTRIDPLQTSAVVSLHGRLFVRAPFEQGS
M