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Carg21352 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21352
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDNA helicase
Genome locationCarg_Chr01:13199924..13201120
RNA-Seq ExpressionCarg21352
SyntenyCarg21352
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4267529.1 unnamed protein product [Prunus armeniaca]3.7e-0981.4Show/hide
Query:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYFKND
        MALM+GEPLV KLAV AKYVVLPGAM AAL+YSPPDY   KND
Subjt:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYFKND

KAE8057437.1 hypothetical protein FH972_014130 [Carpinus fangiana]2.8e-0948.28Show/hide
Query:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYFKNDDTHLMGVLVVDLPSFLIDLPLERPSDHVELALADLCSSFVDNGV
        MALM+GEPLV+KLA+ AKYVVLPGAM AALVYSPPDYA   +    +  +L++    F  D  LE  + H+      +C +   NG+
Subjt:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYFKNDDTHLMGVLVVDLPSFLIDLPLERPSDHVELALADLCSSFVDNGV

KAG7024085.1 hypothetical protein SDJN02_12898, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-0958.67Show/hide
Query:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYFKNDDTHLMGVLVVDLPSFLIDLPLERPSDHVELAL
        MALM+GEPLVRKLAVFAKY VLP AMAAAL+YSPPDY +   DD    G +              RPSDHV L L
Subjt:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYFKNDDTHLMGVLVVDLPSFLIDLPLERPSDHVELAL

KAG7037970.1 hypothetical protein SDJN02_01603, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-40100Show/hide
Query:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYFKNDDTHLMGVLVVDLPSFLIDLPLERPSDHVELALADLCSSFVDNGV
        MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYFKNDDTHLMGVLVVDLPSFLIDLPLERPSDHVELALADLCSSFVDNGV
Subjt:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYFKNDDTHLMGVLVVDLPSFLIDLPLERPSDHVELALADLCSSFVDNGV

KGN55532.1 hypothetical protein Csa_011995 [Cucumis sativus]5.7e-1079.55Show/hide
Query:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYFKNDD
        MALMKGEPL+RKLAVFA Y+VLPGAMAAAL+YSPPDY Y K ++
Subjt:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYFKNDD

TrEMBL top hitse value%identityAlignment
A0A0A0L4N8 Uncharacterized protein2.8e-1079.55Show/hide
Query:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYFKNDD
        MALMKGEPL+RKLAVFA Y+VLPGAMAAAL+YSPPDY Y K ++
Subjt:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYFKNDD

A0A2R6PZ99 DNA helicase1.2e-0875Show/hide
Query:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYFKNDD
        M  M+GEPLV KLAV AKY VLPGAM AAL+YSPPDYAY K  D
Subjt:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYFKNDD

A0A5N6RC88 Uncharacterized protein1.4e-0948.28Show/hide
Query:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYFKNDDTHLMGVLVVDLPSFLIDLPLERPSDHVELALADLCSSFVDNGV
        MALM+GEPLV+KLA+ AKYVVLPGAM AALVYSPPDYA   +    +  +L++    F  D  LE  + H+      +C +   NG+
Subjt:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYFKNDDTHLMGVLVVDLPSFLIDLPLERPSDHVELALADLCSSFVDNGV

A0A6J5TUT5 Uncharacterized protein1.8e-0981.4Show/hide
Query:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYFKND
        MALM+GEPLV KLAV AKYVVLPGAM AAL+YSPPDY   KND
Subjt:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYFKND

A0A7J6E203 Uncharacterized protein2.0e-0868.18Show/hide
Query:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYFKNDD
        MA +KGEPL+RKLA+ +KY VLPGAM AALVYSPPD+ Y+ N++
Subjt:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYFKNDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTGATGAAAGGAGAGCCGCTGGTGAGGAAGCTCGCCGTGTTCGCCAAGTATGTTGTTCTTCCGGGAGCCATGGCCGCAGCTCTCGTTTACTCTCCTCCAGATTA
TGCTTACTTCAAGAATGACGATACCCATTTAATGGGCGTATTAGTAGTTGATCTCCCTAGTTTCCTCATTGATTTGCCTCTGGAACGACCGTCTGATCATGTAGAGCTTG
CATTGGCAGATTTGTGTTCCTCTTTTGTTGATAATGGTGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTGATGAAAGGAGAGCCGCTGGTGAGGAAGCTCGCCGTGTTCGCCAAGTATGTTGTTCTTCCGGGAGCCATGGCCGCAGCTCTCGTTTACTCTCCTCCAGATTA
TGCTTACTTCAAGAATGACGATACCCATTTAATGGGCGTATTAGTAGTTGATCTCCCTAGTTTCCTCATTGATTTGCCTCTGGAACGACCGTCTGATCATGTAGAGCTTG
CATTGGCAGATTTGTGTTCCTCTTTTGTTGATAATGGTGTGTAATGGACTTACTGCATTATGTCTCAATAATTAGTCATTTGTTTTACTTTTGGGGCCTGGTCTTCGGAG
AAAGAACAATGAATTGTTTCCTTGAGGAATACTCAAAATGGGAAGTATATGTTTCCTT
Protein sequenceShow/hide protein sequence
MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYFKNDDTHLMGVLVVDLPSFLIDLPLERPSDHVELALADLCSSFVDNGV