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Carg21353 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21353
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLate embryogenesis abundant protein group 8 protein
Genome locationCarg_Chr01:13198361..13198645
RNA-Seq ExpressionCarg21353
SyntenyCarg21353
Gene Ontology termsNA
InterPro domainsIPR018930 - Late embryogenesis abundant protein, LEA-18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064662.1 late embryogenesis abundant protein group 8 protein [Cucumis melo var. makuwa]1.6e-2674.71Show/hide
Query:  EPPQQQMRRETEEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQGGGTDAPTLSGSGFPEVAPASIDAVTRQGLIH
        E  Q QM  +  EEK  VE+LLPLESSPYVKYKDLE+YK KGYG EGH+EPKP QGGGTDAPTLSGSG+PEV P +ID VT+QGLIH
Subjt:  EPPQQQMRRETEEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQGGGTDAPTLSGSGFPEVAPASIDAVTRQGLIH

KAG6608652.1 hypothetical protein SDJN03_01994, partial [Cucurbita argyrosperma subsp. sororia]4.5e-45100Show/hide
Query:  MWKMEEHEPPQQQMRRETEEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQGGGTDAPTLSGSGFPEVAPASIDAVTRQGLIH
        MWKMEEHEPPQQQMRRETEEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQGGGTDAPTLSGSGFPEVAPASIDAVTRQGLIH
Subjt:  MWKMEEHEPPQQQMRRETEEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQGGGTDAPTLSGSGFPEVAPASIDAVTRQGLIH

XP_022135734.1 uncharacterized protein LOC111007621 [Momordica charantia]1.5e-2468Show/hide
Query:  MWKMEEHEPPQQQMRRET----EEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQ---GGGTDAPTLSGSGFPEVAPASIDAVTRQGLI
        M K EE    Q Q +  T    EEEK SVEELLPLESSPYVKYKDLE+YK +GYG EGH+EPKP Q   GGGTDAPTLSG+GFPEV P++ID  T QGLI
Subjt:  MWKMEEHEPPQQQMRRET----EEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQ---GGGTDAPTLSGSGFPEVAPASIDAVTRQGLI

XP_022937316.1 uncharacterized protein LOC111443639 [Cucurbita moschata]8.6e-2875.27Show/hide
Query:  MWKMEEHEPPQQQMRRETEEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQGGGTDAPTLSGSGFPEVAPASIDAVTRQGLI
        M   EE +  QQQ+ RE +EEK SVEELLPLESSPYVKYKDLE+YK KGYG EGH+EPKP QGGGTDAPTLSGSGFPEV PA+ID VT  GL+
Subjt:  MWKMEEHEPPQQQMRRETEEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQGGGTDAPTLSGSGFPEVAPASIDAVTRQGLI

XP_023535424.1 uncharacterized protein LOC111796868 [Cucurbita pepo subsp. pepo]6.5e-2875.27Show/hide
Query:  MWKMEEHEPPQQQMRRETEEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQGGGTDAPTLSGSGFPEVAPASIDAVTRQGLI
        M   EE +  QQQ+ RE +EEK SVEELLPLESSPYVKYKDLE+YK KGYG EGH+EPKP QGGGTDAPTLSGSGFPEV PA+ID VT  GL+
Subjt:  MWKMEEHEPPQQQMRRETEEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQGGGTDAPTLSGSGFPEVAPASIDAVTRQGLI

TrEMBL top hitse value%identityAlignment
A0A0A0L5Y6 Uncharacterized protein1.1e-2581.08Show/hide
Query:  EEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQGGGTDAPTLSGSGFPEVAPASIDAVTRQGLI
        EEK  VE+LLPLESSPYVKYKDLE+YK KGYGVEGH+ PKP QGGGTDAPTLSGSG PEV P +ID VT+QGLI
Subjt:  EEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQGGGTDAPTLSGSGFPEVAPASIDAVTRQGLI

A0A438ET15 Uncharacterized protein2.4e-1554.02Show/hide
Query:  QQMRRETEEEKGSVEEL-----LPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQ-GGGTDAPTLSGSGFPEVAPASIDAVTRQGL
        +Q+R++TEEE+ + E+      LP+ESSPY+KY DLEDYK +GYG EGH+EPKP Q GGGTDAPTL+G+   +   + +DA  R G+
Subjt:  QQMRRETEEEKGSVEEL-----LPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQ-GGGTDAPTLSGSGFPEVAPASIDAVTRQGL

A0A5A7V8I8 Late embryogenesis abundant protein group 8 protein7.8e-2774.71Show/hide
Query:  EPPQQQMRRETEEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQGGGTDAPTLSGSGFPEVAPASIDAVTRQGLIH
        E  Q QM  +  EEK  VE+LLPLESSPYVKYKDLE+YK KGYG EGH+EPKP QGGGTDAPTLSGSG+PEV P +ID VT+QGLIH
Subjt:  EPPQQQMRRETEEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQGGGTDAPTLSGSGFPEVAPASIDAVTRQGLIH

A0A6J1C2A9 uncharacterized protein LOC1110076217.3e-2568Show/hide
Query:  MWKMEEHEPPQQQMRRET----EEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQ---GGGTDAPTLSGSGFPEVAPASIDAVTRQGLI
        M K EE    Q Q +  T    EEEK SVEELLPLESSPYVKYKDLE+YK +GYG EGH+EPKP Q   GGGTDAPTLSG+GFPEV P++ID  T QGLI
Subjt:  MWKMEEHEPPQQQMRRET----EEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQ---GGGTDAPTLSGSGFPEVAPASIDAVTRQGLI

A0A6J1FA12 uncharacterized protein LOC1114436394.1e-2875.27Show/hide
Query:  MWKMEEHEPPQQQMRRETEEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQGGGTDAPTLSGSGFPEVAPASIDAVTRQGLI
        M   EE +  QQQ+ RE +EEK SVEELLPLESSPYVKYKDLE+YK KGYG EGH+EPKP QGGGTDAPTLSGSGFPEV PA+ID VT  GL+
Subjt:  MWKMEEHEPPQQQMRRETEEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQGGGTDAPTLSGSGFPEVAPASIDAVTRQGLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23110.1 Late embryogenesis abundant protein, group 63.3e-0941.05Show/hide
Query:  MEEHEPPQQQMRRETEEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQGGG-TDAPTLS-----GSGFPEVAPASIDAVTRQGL
        ME+ + P    +   E +   +E +     +PY+ Y +LEDYK KGYG +GH EPK   GGG TDAPT S     G G      +S DA+ RQG+
Subjt:  MEEHEPPQQQMRRETEEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQGGG-TDAPTLS-----GSGFPEVAPASIDAVTRQGL

AT2G23110.2 Late embryogenesis abundant protein, group 63.3e-0941.05Show/hide
Query:  MEEHEPPQQQMRRETEEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQGGG-TDAPTLS-----GSGFPEVAPASIDAVTRQGL
        ME+ + P    +   E +   +E +     +PY+ Y +LEDYK KGYG +GH EPK   GGG TDAPT S     G G      +S DA+ RQG+
Subjt:  MEEHEPPQQQMRRETEEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQGGG-TDAPTLS-----GSGFPEVAPASIDAVTRQGL

AT2G23120.1 Late embryogenesis abundant protein, group 61.2e-0650.88Show/hide
Query:  TEEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKP-IQGGGTDAPTLSG
        TE++   V++      SPY+    LEDYK K YG EGH EP P + GG TDAPT SG
Subjt:  TEEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKP-IQGGGTDAPTLSG

AT2G33690.1 Late embryogenesis abundant protein, group 61.8e-1250Show/hide
Query:  KGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQGGG-TDAPTLSGSGFPEVAPASIDAVTRQ
        K   ++ LPLE+SPY KY+D+EDYK   YG  GH + KP  GGG TDAPT SG    + AP++ID+  ++
Subjt:  KGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQGGG-TDAPTLSGSGFPEVAPASIDAVTRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGAAGATGGAAGAGCATGAGCCGCCGCAGCAGCAAATGAGGCGGGAAACCGAAGAAGAGAAGGGTTCGGTGGAAGAACTGCTGCCACTGGAGAGCAGTCCTTACGT
GAAATACAAGGACTTGGAAGACTACAAAAACAAGGGGTATGGGGTGGAGGGCCATATTGAGCCCAAGCCCATTCAGGGCGGCGGCACCGATGCCCCCACCTTGTCCGGCA
GCGGCTTCCCAGAGGTGGCTCCAGCCTCCATTGACGCCGTCACCAGACAAGGCCTTATCCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGAAGATGGAAGAGCATGAGCCGCCGCAGCAGCAAATGAGGCGGGAAACCGAAGAAGAGAAGGGTTCGGTGGAAGAACTGCTGCCACTGGAGAGCAGTCCTTACGT
GAAATACAAGGACTTGGAAGACTACAAAAACAAGGGGTATGGGGTGGAGGGCCATATTGAGCCCAAGCCCATTCAGGGCGGCGGCACCGATGCCCCCACCTTGTCCGGCA
GCGGCTTCCCAGAGGTGGCTCCAGCCTCCATTGACGCCGTCACCAGACAAGGCCTTATCCACTGA
Protein sequenceShow/hide protein sequence
MWKMEEHEPPQQQMRRETEEEKGSVEELLPLESSPYVKYKDLEDYKNKGYGVEGHIEPKPIQGGGTDAPTLSGSGFPEVAPASIDAVTRQGLIH