; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg21356 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21356
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRING-H2 finger protein ATL80-like
Genome locationCarg_Chr01:13188869..13189429
RNA-Seq ExpressionCarg21356
SyntenyCarg21356
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608649.1 RING-H2 finger protein ATL80, partial [Cucurbita argyrosperma subsp. sororia]1.0e-101100Show/hide
Query:  MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF
        MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF
Subjt:  MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF

Query:  SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP
        SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP
Subjt:  SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP

XP_004145558.1 RING-H2 finger protein ATL8 [Cucumis sativus]1.2e-9292.47Show/hide
Query:  MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF
        MRPFRYLA  NSS+ SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGA STRPPPPPASNKGLKKKILRSLPKYTFTAEF+AQF
Subjt:  MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF

Query:  SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP
        SDCAICLAEF VGDEIRVLPQCGHGFH+SCIDTWFRSHSSCPSCRQILV SQCQKCGGFPASSSSNGGTESRVK+EG+DK NRFLP
Subjt:  SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP

XP_022941514.1 RING-H2 finger protein ATL80-like [Cucurbita moschata]9.7e-10098.92Show/hide
Query:  MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF
        MR FRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF
Subjt:  MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF

Query:  SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP
        SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILV SQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP
Subjt:  SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP

XP_022982152.1 RING-H2 finger protein ATL80 [Cucurbita maxima]1.1e-9898.92Show/hide
Query:  MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF
        MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF
Subjt:  MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF

Query:  SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP
        SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILV SQCQKCGGFPASSSSNGGTESRVKD GEDKRNRFLP
Subjt:  SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP

XP_023523429.1 RING-H2 finger protein ATL8-like [Cucurbita pepo subsp. pepo]9.7e-10098.92Show/hide
Query:  MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF
        MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD GGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF
Subjt:  MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF

Query:  SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP
        SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILV SQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP
Subjt:  SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP

TrEMBL top hitse value%identityAlignment
A0A0A0L5Y2 RING-type domain-containing protein5.6e-9392.47Show/hide
Query:  MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF
        MRPFRYLA  NSS+ SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGA STRPPPPPASNKGLKKKILRSLPKYTFTAEF+AQF
Subjt:  MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF

Query:  SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP
        SDCAICLAEF VGDEIRVLPQCGHGFH+SCIDTWFRSHSSCPSCRQILV SQCQKCGGFPASSSSNGGTESRVK+EG+DK NRFLP
Subjt:  SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP

A0A1S3BWC1 RING-H2 finger protein ATL801.2e-9292.47Show/hide
Query:  MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF
        MRPFRYLA  NSS+ SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDG GA STRPPPPPASNKGLKKKILRSLPKYTFTAEF+AQF
Subjt:  MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF

Query:  SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP
        SDCAICLAEF VGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILV SQCQKCGGFPASSSSNGGTESRVK+EG+DK NRFLP
Subjt:  SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP

A0A5A7VGL3 RING-H2 finger protein ATL801.2e-9292.47Show/hide
Query:  MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF
        MRPFRYLA  NSS+ SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDG GA STRPPPPPASNKGLKKKILRSLPKYTFTAEF+AQF
Subjt:  MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF

Query:  SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP
        SDCAICLAEF VGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILV SQCQKCGGFPASSSSNGGTESRVK+EG+DK NRFLP
Subjt:  SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP

A0A6J1FNK0 RING-H2 finger protein ATL80-like4.7e-10098.92Show/hide
Query:  MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF
        MR FRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF
Subjt:  MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF

Query:  SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP
        SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILV SQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP
Subjt:  SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP

A0A6J1IVW2 RING-H2 finger protein ATL805.2e-9998.92Show/hide
Query:  MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF
        MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF
Subjt:  MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQF

Query:  SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP
        SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILV SQCQKCGGFPASSSSNGGTESRVKD GEDKRNRFLP
Subjt:  SDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP

SwissProt top hitse value%identityAlignment
O22755 Probable E3 ubiquitin-protein ligase ATL442.3e-3556.74Show/hide
Query:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAE-----FAAQFSD---CAICLAEFVVGDEI
        +SD V+IL+ALLCALICV GL AV RCAWLR     G           P+ NKGLKKK L+SLP+ TFTA       AA+  D   CAICL +F  G+EI
Subjt:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAE-----FAAQFSD---CAICLAEFVVGDEI

Query:  RVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCG
        RVLP CGH FHV CID W  S SSCPSCR+IL   +C +CG
Subjt:  RVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCG

Q8LC69 RING-H2 finger protein ATL89.3e-5358.89Show/hide
Query:  FRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEF--AAQFS
        FR L +ANS+S ++   P  ++SD V+ILA LLCAL C++GL+AV+RCAWLR +A     +  T PPP  A+NKGLKKK+LRSLPK T++ +   A +  
Subjt:  FRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEF--AAQFS

Query:  DCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVK--DEGED
        +CAICL EF  GDE+RVLPQCGHGFHVSCIDTW  SHSSCPSCRQILV ++C KCGG P SSSS    ++R+K  ++G D
Subjt:  DCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVK--DEGED

Q9FLC6 RING-H2 finger protein ATL731.9e-2643.29Show/hide
Query:  DANSSSISDTVEPER----YDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPAS-NKGLKKKILRSLPKYTFTAEFAAQFSDC
        DAN  ++ D+V   +     D+  VIILAALLCALIC LG+ +V RC     L        +  P    A+  KG+KK+ L+ +P  +++ E   + ++C
Subjt:  DANSSSISDTVEPER----YDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPAS-NKGLKKKILRSLPKYTFTAEFAAQFSDC

Query:  AICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNG
         ICL +FV G+ +RVLP+C HGFHV CIDTW  SHSSCP+CRQ L+  Q       PA+ S  G
Subjt:  AICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNG

Q9LM69 RING-H2 finger protein ATL806.4e-5457.81Show/hide
Query:  FRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD----GGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEF--A
        FR L ++N+ S +        +SD V+ILAALLCALICVLGL+AV+RC WLR LA       G    +  PP  A+NKGLKKK+L+SLPK TF+ E   +
Subjt:  FRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD----GGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEF--A

Query:  AQFSDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVK---DEGEDKRNRFLP
         +F++CAICLAEF  GDE+RVLPQCGHGFHV+CIDTW  SHSSCPSCRQILV ++C KCGG P SSSS   +E  ++    +GED  N FLP
Subjt:  AQFSDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVK---DEGEDKRNRFLP

Q9ZT49 Probable E3 ubiquitin-protein ligase ATL452.4e-3745.55Show/hide
Query:  RPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAA---
        R  R+L  A+     + +  E   +D V+IL+ALLCAL+CV GL AVARCAWLR L G    A    PPP    NKGLKKK L++LPK T+TA  +    
Subjt:  RPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAA---

Query:  -------------QFSDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDE
                       ++CAIC+ EF  G+EIR+LP C H FHV+CID W  S SSCPSCR+ILV  +C +CG   +++      E++VKD+
Subjt:  -------------QFSDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDE

Arabidopsis top hitse value%identityAlignment
AT1G20823.1 RING/U-box superfamily protein4.6e-5557.81Show/hide
Query:  FRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD----GGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEF--A
        FR L ++N+ S +        +SD V+ILAALLCALICVLGL+AV+RC WLR LA       G    +  PP  A+NKGLKKK+L+SLPK TF+ E   +
Subjt:  FRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD----GGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEF--A

Query:  AQFSDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVK---DEGEDKRNRFLP
         +F++CAICLAEF  GDE+RVLPQCGHGFHV+CIDTW  SHSSCPSCRQILV ++C KCGG P SSSS   +E  ++    +GED  N FLP
Subjt:  AQFSDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVK---DEGEDKRNRFLP

AT1G76410.1 RING/U-box superfamily protein6.6e-5458.89Show/hide
Query:  FRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEF--AAQFS
        FR L +ANS+S ++   P  ++SD V+ILA LLCAL C++GL+AV+RCAWLR +A     +  T PPP  A+NKGLKKK+LRSLPK T++ +   A +  
Subjt:  FRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEF--AAQFS

Query:  DCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVK--DEGED
        +CAICL EF  GDE+RVLPQCGHGFHVSCIDTW  SHSSCPSCRQILV ++C KCGG P SSSS    ++R+K  ++G D
Subjt:  DCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVK--DEGED

AT2G17450.1 RING-H2 finger A3A1.6e-3656.74Show/hide
Query:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAE-----FAAQFSD---CAICLAEFVVGDEI
        +SD V+IL+ALLCALICV GL AV RCAWLR     G           P+ NKGLKKK L+SLP+ TFTA       AA+  D   CAICL +F  G+EI
Subjt:  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAE-----FAAQFSD---CAICLAEFVVGDEI

Query:  RVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCG
        RVLP CGH FHV CID W  S SSCPSCR+IL   +C +CG
Subjt:  RVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCG

AT4G35480.1 RING-H2 finger A3B1.7e-3845.55Show/hide
Query:  RPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAA---
        R  R+L  A+     + +  E   +D V+IL+ALLCAL+CV GL AVARCAWLR L G    A    PPP    NKGLKKK L++LPK T+TA  +    
Subjt:  RPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAA---

Query:  -------------QFSDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDE
                       ++CAIC+ EF  G+EIR+LP C H FHV+CID W  S SSCPSCR+ILV  +C +CG   +++      E++VKD+
Subjt:  -------------QFSDCAICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDE

AT5G05280.1 RING/U-box superfamily protein1.4e-2743.29Show/hide
Query:  DANSSSISDTVEPER----YDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPAS-NKGLKKKILRSLPKYTFTAEFAAQFSDC
        DAN  ++ D+V   +     D+  VIILAALLCALIC LG+ +V RC     L        +  P    A+  KG+KK+ L+ +P  +++ E   + ++C
Subjt:  DANSSSISDTVEPER----YDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPAS-NKGLKKKILRSLPKYTFTAEFAAQFSDC

Query:  AICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNG
         ICL +FV G+ +RVLP+C HGFHV CIDTW  SHSSCP+CRQ L+  Q       PA+ S  G
Subjt:  AICLAEFVVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCCTTTTAGGTACCTCGCCGATGCCAACTCCTCCTCCATCTCCGACACGGTGGAGCCCGAGAGGTATGACTCCGACTTCGTCATAATCCTCGCCGCTCTTCTCTG
CGCCTTGATATGCGTTCTTGGTCTCGTTGCTGTCGCTCGATGTGCCTGGCTACGCCACCTCGCTGGCGATGGAGGCGGCGCTGCTTCCACTCGTCCTCCTCCGCCTCCTG
CATCCAACAAAGGTCTCAAGAAGAAGATCCTGAGGTCTCTTCCCAAGTACACCTTCACCGCCGAGTTTGCTGCTCAGTTCTCAGATTGCGCGATCTGCCTCGCGGAATTC
GTTGTCGGTGATGAAATCCGCGTTCTGCCGCAGTGTGGCCATGGATTTCACGTGTCCTGCATCGATACGTGGTTCCGATCTCACTCCTCCTGTCCTTCATGCCGTCAGAT
TCTGGTGGGAAGTCAGTGCCAGAAGTGCGGCGGTTTTCCTGCGAGCTCGAGTTCGAACGGTGGGACTGAATCCAGAGTAAAAGATGAAGGAGAAGATAAGAGGAATAGGT
TCTTACCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGTCCTTTTAGGTACCTCGCCGATGCCAACTCCTCCTCCATCTCCGACACGGTGGAGCCCGAGAGGTATGACTCCGACTTCGTCATAATCCTCGCCGCTCTTCTCTG
CGCCTTGATATGCGTTCTTGGTCTCGTTGCTGTCGCTCGATGTGCCTGGCTACGCCACCTCGCTGGCGATGGAGGCGGCGCTGCTTCCACTCGTCCTCCTCCGCCTCCTG
CATCCAACAAAGGTCTCAAGAAGAAGATCCTGAGGTCTCTTCCCAAGTACACCTTCACCGCCGAGTTTGCTGCTCAGTTCTCAGATTGCGCGATCTGCCTCGCGGAATTC
GTTGTCGGTGATGAAATCCGCGTTCTGCCGCAGTGTGGCCATGGATTTCACGTGTCCTGCATCGATACGTGGTTCCGATCTCACTCCTCCTGTCCTTCATGCCGTCAGAT
TCTGGTGGGAAGTCAGTGCCAGAAGTGCGGCGGTTTTCCTGCGAGCTCGAGTTCGAACGGTGGGACTGAATCCAGAGTAAAAGATGAAGGAGAAGATAAGAGGAATAGGT
TCTTACCTTAG
Protein sequenceShow/hide protein sequence
MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEF
VVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDKRNRFLP