CuGenDBv2

Gene ID	Carg21385
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Large proline-rich protein bag6-B isoform X1
Genome location	Carg_Chr01:13060043..13061234
RNA-Seq Expression	Carg21385
Synteny	Carg21385
Gene Ontology terms	GO:0030433 - ubiquitin-dependent ERAD pathway (biological process) GO:0071818 - BAT3 complex (cellular component) GO:0031593 - polyubiquitin modification-dependent protein binding (molecular function) GO:0051787 - misfolded protein binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6608622.1 hypothetical protein SDJN03_01964, partial [Cucurbita argyrosperma subsp. sororia]

6.7e-90

99.44

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Query:  MNRFERAISQNVSQNGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG
        MNRFERAISQNVSQN GALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG
Subjt:  MNRFERAISQNVSQNGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG

Query:  SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN
        SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN
Subjt:  SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN

KAG7037937.1 hypothetical protein SDJN02_01570 [Cucurbita argyrosperma subsp. argyrosperma]

5.5e-92

100

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Query:  MNRFERAISQNVSQNGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG
        MNRFERAISQNVSQNGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG
Subjt:  MNRFERAISQNVSQNGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG

Query:  SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN
        SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN
Subjt:  SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN

XP_022940175.1 uncharacterized protein LOC111445881 isoform X1 [Cucurbita moschata]

4.7e-91

98.88

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Query:  MNRFERAISQNVSQNGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG
        MNRFERAISQNVSQNGGALPRFELP NPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG
Subjt:  MNRFERAISQNVSQNGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG

Query:  SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN
        SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCN+EDIADELCSHDTLAEEYLGILSNDIKRRLQGN
Subjt:  SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN

XP_023525662.1 uncharacterized protein LOC111789201 isoform X1 [Cucurbita pepo subsp. pepo]

3.0e-90

98.89

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Query:  MNRFERAISQNVSQN-GGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDL
        MNRFERAISQNVSQN GGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDL
Subjt:  MNRFERAISQNVSQN-GGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDL

Query:  GSSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN
        GSSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCN+EDIADELCSHDTLAEEYLGILSNDIKRRLQGN
Subjt:  GSSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN

XP_023525663.1 uncharacterized protein LOC111789201 isoform X2 [Cucurbita pepo subsp. pepo]

1.2e-91

99.44

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Query:  MNRFERAISQNVSQNGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG
        MNRFERAISQNVSQNGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG
Subjt:  MNRFERAISQNVSQNGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG

Query:  SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN
        SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCN+EDIADELCSHDTLAEEYLGILSNDIKRRLQGN
Subjt:  SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN

TrEMBL top hits

e value

%identity

Alignment

A0A5A7VE91 Large proline-rich protein bag6-B isoform X1

5.8e-71

79.89

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Query:  MNRFERAISQNVSQNGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG
        MNRFERAIS  +SQNGG  PRFELPTNPQ+LQ+P+SLSIVLRNAQ LLS+YAI+SLPRIAERFEQDGSS+DP VRGQIQEELVQVGLRMQQFGALLLDLG
Subjt:  MNRFERAISQNVSQNGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG

Query:  SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN
        SSILTL LEQST+D +DLA+R+ STN PMDVFRAVVESSA++SG ++ DIA+ LC+HD+LAEEYL IL++DI RRLQ N
Subjt:  SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN

A0A6J1FHQ5 uncharacterized protein LOC111445881 isoform X2

2.8e-89

98.32

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Query:  MNRFERAISQNVSQNGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG
        MNRFERAISQNVSQN GALPRFELP NPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG
Subjt:  MNRFERAISQNVSQNGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG

Query:  SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN
        SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCN+EDIADELCSHDTLAEEYLGILSNDIKRRLQGN
Subjt:  SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN

A0A6J1FPT9 uncharacterized protein LOC111445881 isoform X1

2.3e-91

98.88

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Query:  MNRFERAISQNVSQNGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG
        MNRFERAISQNVSQNGGALPRFELP NPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG
Subjt:  MNRFERAISQNVSQNGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG

Query:  SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN
        SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCN+EDIADELCSHDTLAEEYLGILSNDIKRRLQGN
Subjt:  SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN

A0A6J1IWC0 uncharacterized protein LOC111481190 isoform X1

2.8e-89

96.65

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Query:  MNRFERAISQNVSQNGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG
        MNRFERAISQNVSQNGG LPRFELPTNPQDLQTPKSLSIVLRNAQHLLS+YAI+SLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG
Subjt:  MNRFERAISQNVSQNGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG

Query:  SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN
        SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCN+EDIADELCSHD LAEEYL ILSNDIKRRLQGN
Subjt:  SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN

A0A6J1J4J7 uncharacterized protein LOC111481190 isoform X2

3.4e-87

96.09

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Query:  MNRFERAISQNVSQNGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG
        MNRFERAISQNVSQN G LPRFELPTNPQDLQTPKSLSIVLRNAQHLLS+YAI+SLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG
Subjt:  MNRFERAISQNVSQNGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLG

Query:  SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN
        SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCN+EDIADELCSHD LAEEYL ILSNDIKRRLQGN
Subjt:  SSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN

SwissProt top hits

e value

%identity

Alignment

D5LXJ0 Ubiquitin-like domain-containing protein CIP73

1.8e-05

31.82

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Query:  LPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQS
        L + P+ L +P SL+ VL + + ++ E A   L ++A + E      DP+ R   Q   ++ G+     GA LL+LG + +TL L Q+
Subjt:  LPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQS

Arabidopsis top hits

e value

%identity

Alignment

AT5G42220.1 Ubiquitin-like superfamily protein

1.9e-26

56.41

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Query:  MNRFERAISQN------VSQNGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGA
        +NR E+A+SQN       S   G  PR ELP N +   TP++LS+VLRNAQHLLS   + SL  IA R EQDGSS+DP +R QIQ E VQVGL MQ  GA
Subjt:  MNRFERAISQN------VSQNGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGA

Query:  LLLDLGSSILTLHLEQS
        LLL+LG +ILTL +  S
Subjt:  LLLDLGSSILTLHLEQS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAACCGTTTCGAGCGAGCAATCTCTCAAAATGTTTCTCAAAATGGTGGAGCTCTACCAAGGTTCGAACTCCCCACCAATCCCCAAGATCTGCAGACTCCTAAATCTTT
GAGTATCGTTTTGCGAAATGCACAACACCTCCTAAGTGAATATGCAATATATTCACTTCCGCGCATCGCTGAGCGTTTCGAGCAAGACGGTTCCTCGACCGATCCAATGG
TGAGGGGTCAAATACAGGAAGAGTTAGTGCAAGTAGGACTTAGGATGCAACAGTTCGGCGCGCTTCTTCTCGATCTCGGCAGTTCAATCTTGACGCTCCATTTGGAACAA
TCCACGATTGACCATAAAGATCTTGCTCAAAGGATTACATCTACCAATTCTCCTATGGATGTGTTTCGCGCTGTGGTTGAGAGTTCGGCTCAGGTTTCTGGCTGCAACAG
TGAAGATATTGCAGATGAGTTGTGCAGCCATGACACGCTTGCTGAGGAATATTTAGGGATATTATCAAATGATATCAAACGACGTTTGCAAGGCAATTGA

mRNA sequence

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AAAAATGTAAGCCTTCCATTTTTCTTGGCCTCTCAATTTTGTTGCCTCTTCCTGCGCTTTCATTACAAACCAAATAGGATCCCCTTTGATTTTCCGGGGAAAGGTCCCTA
AGGATGAACGCCCATCCTCTAAGTATCATACCTCTGTATTCCTCTCTTTTCCTGCCCTAATTCTCATTTCATCTCCTTTCTTTCCCCTTTTCTTCTCCATCCTTCAACAA
CTCCTCCGCGTTCGCGTTCATGAACCGTTTCGAGCGAGCAATCTCTCAAAATGTTTCTCAAAATGGTGGAGCTCTACCAAGGTTCGAACTCCCCACCAATCCCCAAGATC
TGCAGACTCCTAAATCTTTGAGTATCGTTTTGCGAAATGCACAACACCTCCTAAGTGAATATGCAATATATTCACTTCCGCGCATCGCTGAGCGTTTCGAGCAAGACGGT
TCCTCGACCGATCCAATGGTGAGGGGTCAAATACAGGAAGAGTTAGTGCAAGTAGGACTTAGGATGCAACAGTTCGGCGCGCTTCTTCTCGATCTCGGCAGTTCAATCTT
GACGCTCCATTTGGAACAATCCACGATTGACCATAAAGATCTTGCTCAAAGGATTACATCTACCAATTCTCCTATGGATGTGTTTCGCGCTGTGGTTGAGAGTTCGGCTC
AGGTTTCTGGCTGCAACAGTGAAGATATTGCAGATGAGTTGTGCAGCCATGACACGCTTGCTGAGGAATATTTAGGGATATTATCAAATGATATCAAACGACGTTTGCAA
GGCAATTGAGAGCAGGAAAAATAAGAAGGTGTTTGAAGGATATTTGCAGATTTGAGGGCGGAATTCCATCAATGCCTTGCCTTCCTCAACTTTATTTTTCTTCCTTTCTT

Protein sequence

Show/hide protein sequence

MNRFERAISQNVSQNGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQ
STIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN

Carg21385 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome