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Carg21401 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21401
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionF-box domain-containing protein
Genome locationCarg_Chr13:6346539..6347488
RNA-Seq ExpressionCarg21401
SyntenyCarg21401
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0080048 - GDP-D-glucose phosphorylase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2028691.1 hypothetical protein ES319_D05G113400v1 [Gossypium barbadense]3.0e-1983.87Show/hide
Query:  AGFHCSITALRQESCVKIRRNKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG
        AGF    TALR+E C KIRR KE MQAFPKFLIASPSFHGGRGALPSAGGHPADLT+LAGGG
Subjt:  AGFHCSITALRQESCVKIRRNKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG

KAG4145722.1 hypothetical protein ERO13_D05G111500v2 [Gossypium hirsutum]3.0e-1983.87Show/hide
Query:  AGFHCSITALRQESCVKIRRNKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG
        AGF    TALR+E C KIRR KE MQAFPKFLIASPSFHGGRGALPSAGGHPADLT+LAGGG
Subjt:  AGFHCSITALRQESCVKIRRNKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG

KAG7019470.1 hypothetical protein SDJN02_18431, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-42100Show/hide
Query:  MVNSSITVHSGRLRGSEQESRKEHGAGFHCSITALRQESCVKIRRNKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGGY
        MVNSSITVHSGRLRGSEQESRKEHGAGFHCSITALRQESCVKIRRNKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGGY
Subjt:  MVNSSITVHSGRLRGSEQESRKEHGAGFHCSITALRQESCVKIRRNKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGGY

MBA0622908.1 hypothetical protein [Gossypium davidsonii]3.0e-1983.87Show/hide
Query:  AGFHCSITALRQESCVKIRRNKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG
        AGF    TALR+E C KIRR KE MQAFPKFLIASPSFHGGRGALPSAGGHPADLT+LAGGG
Subjt:  AGFHCSITALRQESCVKIRRNKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG

TYH70491.1 hypothetical protein ES332_D05G121100v1 [Gossypium tomentosum]3.0e-1983.87Show/hide
Query:  AGFHCSITALRQESCVKIRRNKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG
        AGF    TALR+E C KIRR KE MQAFPKFLIASPSFHGGRGALPSAGGHPADLT+LAGGG
Subjt:  AGFHCSITALRQESCVKIRRNKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG

TrEMBL top hitse value%identityAlignment
A0A1R3HTR3 F-box domain-containing protein1.9e-1985.25Show/hide
Query:  AGFHCSITALRQESCVKIRRNKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGG
        AGF  S TALR+E C KIRR KE M AFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGG
Subjt:  AGFHCSITALRQESCVKIRRNKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGG

A0A5D2CIG7 Uncharacterized protein1.5e-1983.87Show/hide
Query:  AGFHCSITALRQESCVKIRRNKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG
        AGF    TALR+E C KIRR KE MQAFPKFLIASPSFHGGRGALPSAGGHPADLT+LAGGG
Subjt:  AGFHCSITALRQESCVKIRRNKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG

A0A5D2KTI7 Uncharacterized protein1.5e-1983.87Show/hide
Query:  AGFHCSITALRQESCVKIRRNKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG
        AGF    TALR+E C KIRR KE MQAFPKFLIASPSFHGGRGALPSAGGHPADLT+LAGGG
Subjt:  AGFHCSITALRQESCVKIRRNKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG

A0A5J5RJ23 Uncharacterized protein1.5e-1983.87Show/hide
Query:  AGFHCSITALRQESCVKIRRNKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG
        AGF    TALR+E C KIRR KE MQAFPKFLIASPSFHGGRGALPSAGGHPADLT+LAGGG
Subjt:  AGFHCSITALRQESCVKIRRNKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG

A0A7J8S9X5 Uncharacterized protein1.5e-1983.87Show/hide
Query:  AGFHCSITALRQESCVKIRRNKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG
        AGF    TALR+E C KIRR KE MQAFPKFLIASPSFHGGRGALPSAGGHPADLT+LAGGG
Subjt:  AGFHCSITALRQESCVKIRRNKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAATTCATCCATTACTGTGCACAGTGGGAGATTGAGAGGGAGCGAGCAGGAATCGCGGAAGGAACACGGGGCTGGCTTTCACTGCTCAATCACGGCTTTAAGGCA
AGAGTCTTGTGTCAAAATTAGAAGGAACAAAGAATACATGCAAGCTTTCCCTAAGTTCTTGATTGCATCCCCTTCATTTCACGGTGGGCGCGGTGCCCTGCCTTCAGCTG
GTGGGCACCCAGCAGATCTTACCTTCCTTGCTGGTGGTGGTTAC
mRNA sequenceShow/hide mRNA sequence
ATTTACTAAGATGAAAAGCTTATACCAAAGAGATGGCCATTCATTTTCCATTCCCATCCTTGCATGATCCAGACCGCTCATAAGAGTGTAGAACTCATTGTGATAATTTG
GGTGTTTTGTACAGAGAACACGCGTCGATGGTTAATTCATCCATTACTGTGCACAGTGGGAGATTGAGAGGGAGCGAGCAGGAATCGCGGAAGGAACACGGGGCTGGCTT
TCACTGCTCAATCACGGCTTTAAGGCAAGAGTCTTGTGTCAAAATTAGAAGGAACAAAGAATACATGCAAGCTTTCCCTAAGTTCTTGATTGCATCCCCTTCATTTCACG
GTGGGCGCGGTGCCCTGCCTTCAGCTGGTGGGCACCCAGCAGATCTTACCTTCCTTGCTGGTGGTGGTTAC
Protein sequenceShow/hide protein sequence
MVNSSITVHSGRLRGSEQESRKEHGAGFHCSITALRQESCVKIRRNKEYMQAFPKFLIASPSFHGGRGALPSAGGHPADLTFLAGGGY