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Carg21455 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21455
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription factor MYB1-like
Genome locationCarg_Chr05:5268390..5277064
RNA-Seq ExpressionCarg21455
SyntenyCarg21455
Gene Ontology termsNA
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029918.1 Transcription factor MYB-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]9.5e-61100Show/hide
Query:  MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLAEESSKSKEKEYVEDQNGEKQGILIQNQNQNVPIIEQSGSIRMENIQMDYQFDQEVVAMADGDGCNKR
        MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLAEESSKSKEKEYVEDQNGEKQGILIQNQNQNVPIIEQSGSIRMENIQMDYQFDQEVVAMADGDGCNKR
Subjt:  MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLAEESSKSKEKEYVEDQNGEKQGILIQNQNQNVPIIEQSGSIRMENIQMDYQFDQEVVAMADGDGCNKR

Query:  ELWDDWVSEMDLWIDSL
        ELWDDWVSEMDLWIDSL
Subjt:  ELWDDWVSEMDLWIDSL

XP_022933166.1 transcription factor MYB1-like [Cucurbita moschata]6.4e-4956.25Show/hide
Query:  MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLA-------------------------------------------------------------------
        MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLA                                                                   
Subjt:  MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLA-------------------------------------------------------------------

Query:  ------------------------EESSKSKEKEYVEDQNGEKQGILIQNQNQNVPIIEQSGSIRMENIQMDYQFDQEVVAMADGDGCNKRELWDDWVSE
                                EESSKSKEKEYVEDQNGEKQGILIQNQNQNVPIIEQSGSIRMENIQMDYQFDQEVVAMADGDGCNKRELWDDWVSE
Subjt:  ------------------------EESSKSKEKEYVEDQNGEKQGILIQNQNQNVPIIEQSGSIRMENIQMDYQFDQEVVAMADGDGCNKRELWDDWVSE

Query:  MDLWIDSL
        MDLWIDSL
Subjt:  MDLWIDSL

XP_022997553.1 transcription factor MYB1-like [Cucurbita maxima]1.1e-4855.29Show/hide
Query:  MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLA-------------------------------------------------------------------
        MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLA                                                                   
Subjt:  MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLA-------------------------------------------------------------------

Query:  ------------------------EESSKSKEKEYVEDQNGEKQGILIQNQNQNVPIIEQSGSIRMENIQMDYQFDQEVVAMADGDGCNKRELWDDWVSE
                                EESSKSKEKEY+EDQNGEKQGILIQNQNQNVPI+EQSGSIRMENIQMDYQFDQEVVAMADGDGCNKRELWDDWVSE
Subjt:  ------------------------EESSKSKEKEYVEDQNGEKQGILIQNQNQNVPIIEQSGSIRMENIQMDYQFDQEVVAMADGDGCNKRELWDDWVSE

Query:  MDLWIDSL
        MDLWIDSL
Subjt:  MDLWIDSL

XP_023520914.1 transcription factor MYB1-like [Cucurbita pepo subsp. pepo]8.4e-4955.77Show/hide
Query:  MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLA-------------------------------------------------------------------
        MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLA                                                                   
Subjt:  MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLA-------------------------------------------------------------------

Query:  ------------------------EESSKSKEKEYVEDQNGEKQGILIQNQNQNVPIIEQSGSIRMENIQMDYQFDQEVVAMADGDGCNKRELWDDWVSE
                                EESSKSKEKEYVEDQNGEKQGILIQNQNQNVPI+EQSGSIRMENIQMDYQFDQEVVAMADGDGCNKRELWDDWVSE
Subjt:  ------------------------EESSKSKEKEYVEDQNGEKQGILIQNQNQNVPIIEQSGSIRMENIQMDYQFDQEVVAMADGDGCNKRELWDDWVSE

Query:  MDLWIDSL
        MDLWIDSL
Subjt:  MDLWIDSL

XP_023522299.1 transcription factor MYB82-like [Cucurbita pepo subsp. pepo]6.0e-3996.51Show/hide
Query:  LAEESSKSKEKEYVEDQNGEKQGILIQNQNQNVPIIEQSGSIRMENIQMDYQFDQEVVAMADGDGCNKRELWDDWVSEMDLWIDSL
        + EESSKSKEKEYVEDQNGEKQGILIQNQNQNVPI+EQSGSIRMENIQMDYQFDQEVVAMADGDGCNKRELWDDWVSEMDLWIDSL
Subjt:  LAEESSKSKEKEYVEDQNGEKQGILIQNQNQNVPIIEQSGSIRMENIQMDYQFDQEVVAMADGDGCNKRELWDDWVSEMDLWIDSL

TrEMBL top hitse value%identityAlignment
A0A1S3B4A4 transcription factor MYB90-like8.5e-3143.05Show/hide
Query:  MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLA-------------------------------------------------------------------
        MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLA                                                                   
Subjt:  MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLA-------------------------------------------------------------------

Query:  --------------------------------EESSKSKEKEYVED---QNGEKQGILIQ-NQNQNVPI-IEQSGSIRMENIQMD-YQFDQEVV-AMADG
                                        EESSKSK KEYV+D    N E QGIL++ NQNQN PI IEQ+ S+ + N+QMD +QFDQ+V+ AM D 
Subjt:  --------------------------------EESSKSKEKEYVED---QNGEKQGILIQ-NQNQNVPI-IEQSGSIRMENIQMD-YQFDQEVV-AMADG

Query:  DGCNKRELWDDWVSEMDLWIDSL
        DGCNKRELWDDW+SEMDLWIDSL
Subjt:  DGCNKRELWDDWVSEMDLWIDSL

A0A5A7U600 Transcription factor MYB90-like2.5e-2265.35Show/hide
Query:  GKWHRVPQLAEESSKSKEKEYVED---QNGEKQGILIQ-NQNQNVPI-IEQSGSIRMENIQMD-YQFDQEVV-AMADGDGCNKRELWDDWVSEMDLWIDS
        GK  +   L EESSKSK KEYV+D    N E QGIL++ NQNQN PI IEQ+ S+ + N+QMD +QFDQ+V+ AM D DGCNKRELWDDW+SEMDLWIDS
Subjt:  GKWHRVPQLAEESSKSKEKEYVED---QNGEKQGILIQ-NQNQNVPI-IEQSGSIRMENIQMD-YQFDQEVV-AMADGDGCNKRELWDDWVSEMDLWIDS

Query:  L
        L
Subjt:  L

A0A6J1CTG0 transcription factor WER-like1.5e-1934.62Show/hide
Query:  MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLA-------------------------------------------------------------------
        MGG+AWTEEEDYLLKKCIEQYGEGKWHRVPQLA                                                                   
Subjt:  MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLA-------------------------------------------------------------------

Query:  ------------------------------------EESSKSKEK------EYVEDQNGE--KQGILIQNQNQNVPII--EQSGSI-RMENIQMDYQFDQ
                                            EESSKS+ K      ++ ++ NGE  ++ IL+QNQNQN+PII  +QS S+  + N+QM+++   
Subjt:  ------------------------------------EESSKSKEK------EYVEDQNGE--KQGILIQNQNQNVPII--EQSGSI-RMENIQMDYQFDQ

Query:  EVVAMADG---DGCNKRELWDDWVSEMDLWIDSL
           A+ D     GCNKRE+WDDW+SEMDLWIDSL
Subjt:  EVVAMADG---DGCNKRELWDDWVSEMDLWIDSL

A0A6J1EYC9 transcription factor MYB1-like3.1e-4956.25Show/hide
Query:  MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLA-------------------------------------------------------------------
        MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLA                                                                   
Subjt:  MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLA-------------------------------------------------------------------

Query:  ------------------------EESSKSKEKEYVEDQNGEKQGILIQNQNQNVPIIEQSGSIRMENIQMDYQFDQEVVAMADGDGCNKRELWDDWVSE
                                EESSKSKEKEYVEDQNGEKQGILIQNQNQNVPIIEQSGSIRMENIQMDYQFDQEVVAMADGDGCNKRELWDDWVSE
Subjt:  ------------------------EESSKSKEKEYVEDQNGEKQGILIQNQNQNVPIIEQSGSIRMENIQMDYQFDQEVVAMADGDGCNKRELWDDWVSE

Query:  MDLWIDSL
        MDLWIDSL
Subjt:  MDLWIDSL

A0A6J1KE93 transcription factor MYB1-like5.3e-4955.29Show/hide
Query:  MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLA-------------------------------------------------------------------
        MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLA                                                                   
Subjt:  MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLA-------------------------------------------------------------------

Query:  ------------------------EESSKSKEKEYVEDQNGEKQGILIQNQNQNVPIIEQSGSIRMENIQMDYQFDQEVVAMADGDGCNKRELWDDWVSE
                                EESSKSKEKEY+EDQNGEKQGILIQNQNQNVPI+EQSGSIRMENIQMDYQFDQEVVAMADGDGCNKRELWDDWVSE
Subjt:  ------------------------EESSKSKEKEYVEDQNGEKQGILIQNQNQNVPIIEQSGSIRMENIQMDYQFDQEVVAMADGDGCNKRELWDDWVSE

Query:  MDLWIDSL
        MDLWIDSL
Subjt:  MDLWIDSL

SwissProt top hitse value%identityAlignment
A0A2R6S148 Transcription factor MYB11.7e-0788.46Show/hide
Query:  AWTEEEDYLLKKCIEQYGEGKWHRVP
        AWTEEED LLKKCIE+YGEGKWH+VP
Subjt:  AWTEEEDYLLKKCIEQYGEGKWHRVP

Q9FE25 Transcription factor MYB752.0e-0573.08Show/hide
Query:  AWTEEEDYLLKKCIEQYGEGKWHRVP
        AWT EED LL++CI +YGEGKWH+VP
Subjt:  AWTEEEDYLLKKCIEQYGEGKWHRVP

Q9FNV8 Transcription factor MYB1143.5e-0573.08Show/hide
Query:  AWTEEEDYLLKKCIEQYGEGKWHRVP
        AWT EED LL++CI +YGEGKWH+VP
Subjt:  AWTEEEDYLLKKCIEQYGEGKWHRVP

Q9FNV9 Transcription factor MYB1139.1e-0676Show/hide
Query:  WTEEEDYLLKKCIEQYGEGKWHRVP
        WT EED LL++CI++YGEGKWHRVP
Subjt:  WTEEEDYLLKKCIEQYGEGKWHRVP

Q9ZTC3 Transcription factor MYB902.7e-0573.08Show/hide
Query:  AWTEEEDYLLKKCIEQYGEGKWHRVP
        AWT EED LL+ CI++YGEGKWH+VP
Subjt:  AWTEEEDYLLKKCIEQYGEGKWHRVP

Arabidopsis top hitse value%identityAlignment
AT1G56650.1 production of anthocyanin pigment 11.4e-0673.08Show/hide
Query:  AWTEEEDYLLKKCIEQYGEGKWHRVP
        AWT EED LL++CI +YGEGKWH+VP
Subjt:  AWTEEEDYLLKKCIEQYGEGKWHRVP

AT1G66370.1 myb domain protein 1136.5e-0776Show/hide
Query:  WTEEEDYLLKKCIEQYGEGKWHRVP
        WT EED LL++CI++YGEGKWHRVP
Subjt:  WTEEEDYLLKKCIEQYGEGKWHRVP

AT1G66380.1 myb domain protein 1142.5e-0673.08Show/hide
Query:  AWTEEEDYLLKKCIEQYGEGKWHRVP
        AWT EED LL++CI +YGEGKWH+VP
Subjt:  AWTEEEDYLLKKCIEQYGEGKWHRVP

AT1G66390.1 myb domain protein 901.9e-0673.08Show/hide
Query:  AWTEEEDYLLKKCIEQYGEGKWHRVP
        AWT EED LL+ CI++YGEGKWH+VP
Subjt:  AWTEEEDYLLKKCIEQYGEGKWHRVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGCATTGCTTGGACTGAAGAAGAAGATTACTTACTCAAGAAATGCATCGAGCAATATGGTGAAGGGAAATGGCATCGTGTTCCTCAATTGGCTGAAGAAAGCAG
CAAATCAAAAGAAAAAGAATATGTTGAGGATCAAAATGGAGAAAAGCAAGGAATATTGATACAAAATCAGAACCAAAACGTACCAATTATTGAACAAAGTGGTAGCATCC
GCATGGAGAATATCCAAATGGACTACCAATTTGATCAAGAAGTGGTAGCAATGGCAGATGGAGATGGGTGCAACAAGAGGGAGCTTTGGGATGATTGGGTATCAGAAATG
GATCTTTGGATTGATTCTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGCATTGCTTGGACTGAAGAAGAAGATTACTTACTCAAGAAATGCATCGAGCAATATGGTGAAGGGAAATGGCATCGTGTTCCTCAATTGGCTGAAGAAAGCAG
CAAATCAAAAGAAAAAGAATATGTTGAGGATCAAAATGGAGAAAAGCAAGGAATATTGATACAAAATCAGAACCAAAACGTACCAATTATTGAACAAAGTGGTAGCATCC
GCATGGAGAATATCCAAATGGACTACCAATTTGATCAAGAAGTGGTAGCAATGGCAGATGGAGATGGGTGCAACAAGAGGGAGCTTTGGGATGATTGGGTATCAGAAATG
GATCTTTGGATTGATTCTTTGTGA
Protein sequenceShow/hide protein sequence
MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLAEESSKSKEKEYVEDQNGEKQGILIQNQNQNVPIIEQSGSIRMENIQMDYQFDQEVVAMADGDGCNKRELWDDWVSEM
DLWIDSL