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Carg21458 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21458
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionchromatin assembly factor 1 subunit FAS1
Genome locationCarg_Chr05:5251600..5252229
RNA-Seq ExpressionCarg21458
SyntenyCarg21458
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006334 - nucleosome assembly (biological process)
GO:0009555 - pollen development (biological process)
GO:0009825 - multidimensional cell growth (biological process)
GO:0009934 - regulation of meristem structural organization (biological process)
GO:0010026 - trichome differentiation (biological process)
GO:0031507 - heterochromatin assembly (biological process)
GO:0045787 - positive regulation of cell cycle (biological process)
GO:0048366 - leaf development (biological process)
GO:0051301 - cell division (biological process)
GO:0005634 - nucleus (cellular component)
GO:0033186 - CAF-1 complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051319.1 chromatin assembly factor 1 subunit FAS1 isoform X1 [Cucumis melo var. makuwa]3.7e-3162.14Show/hide
Query:  FSQEQSILQHFCEQELDHHPSNFFKETNTTVVVMDVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEVKSQKVDI
        F Q Q   Q    Q+L+ HP +F        VVMDVDE S++SSTD Q  PR VQKR+R   E+ SLEK EREARIE +QKE+DSLFKYYDEVK QKVD+
Subjt:  FSQEQSILQHFCEQELDHHPSNFFKETNTTVVVMDVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEVKSQKVDI

Query:  DLDQCSSPISIVFALMEESELPLSMLLDEIYEKMKKIKDG
        DL  CSS  SIV ALMEESEL LS L+DEI+EKM+KI +G
Subjt:  DLDQCSSPISIVFALMEESELPLSMLLDEIYEKMKKIKDG
KAG7029915.1 Chromatin assembly factor 1 subunit FAS1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-82100Show/hide
Query:  PPYRTPSCQATPISFGGKNQFSQEQSILQHFCEQELDHHPSNFFKETNTTVVVMDVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQ
        PPYRTPSCQATPISFGGKNQFSQEQSILQHFCEQELDHHPSNFFKETNTTVVVMDVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQ
Subjt:  PPYRTPSCQATPISFGGKNQFSQEQSILQHFCEQELDHHPSNFFKETNTTVVVMDVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQ

Query:  KEMDSLFKYYDEVKSQKVDIDLDQCSSPISIVFALMEESELPLSMLLDEIYEKMKKIKDGD
        KEMDSLFKYYDEVKSQKVDIDLDQCSSPISIVFALMEESELPLSMLLDEIYEKMKKIKDGD
Subjt:  KEMDSLFKYYDEVKSQKVDIDLDQCSSPISIVFALMEESELPLSMLLDEIYEKMKKIKDGD
XP_038890959.1 chromatin assembly factor 1 subunit FAS1 isoform X1 [Benincasa hispida]2.4e-3072.48Show/hide
Query:  VVMDVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEVKSQKVDIDLDQCSSPISIVFALMEESELPLSMLLDEIY
        VVMD DE S+ S+TDGQ WPR VQKR+R   E+ SL+K EREA+I+ LQKE+DSLFKYYDEVK QKVD+DL QCSS  SIV ALMEESELPLS L+DEIY
Subjt:  VVMDVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEVKSQKVDIDLDQCSSPISIVFALMEESELPLSMLLDEIY

Query:  EKMKKIKDG
        EKM+KI  G
Subjt:  EKMKKIKDG
XP_038890960.1 chromatin assembly factor 1 subunit FAS1 isoform X2 [Benincasa hispida]2.4e-3072.48Show/hide
Query:  VVMDVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEVKSQKVDIDLDQCSSPISIVFALMEESELPLSMLLDEIY
        VVMD DE S+ S+TDGQ WPR VQKR+R   E+ SL+K EREA+I+ LQKE+DSLFKYYDEVK QKVD+DL QCSS  SIV ALMEESELPLS L+DEIY
Subjt:  VVMDVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEVKSQKVDIDLDQCSSPISIVFALMEESELPLSMLLDEIY

Query:  EKMKKIKDG
        EKM+KI  G
Subjt:  EKMKKIKDG
XP_038890961.1 chromatin assembly factor 1 subunit FAS1 isoform X3 [Benincasa hispida]2.4e-3072.48Show/hide
Query:  VVMDVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEVKSQKVDIDLDQCSSPISIVFALMEESELPLSMLLDEIY
        VVMD DE S+ S+TDGQ WPR VQKR+R   E+ SL+K EREA+I+ LQKE+DSLFKYYDEVK QKVD+DL QCSS  SIV ALMEESELPLS L+DEIY
Subjt:  VVMDVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEVKSQKVDIDLDQCSSPISIVFALMEESELPLSMLLDEIY

Query:  EKMKKIKDG
        EKM+KI  G
Subjt:  EKMKKIKDG
TrEMBL top hitse value%identityAlignment
A0A0A0LMY1 Uncharacterized protein1.6e-3262.86Show/hide
Query:  FSQEQSILQHFCEQELDHHPSNFFKETNTTVVVMDVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEVKSQKVDI
        F Q Q   Q    Q+L+ HP +F        VVMD+DE+S+ SSTD Q  PR VQKR+R   E+ SLEK EREARIE +Q+E+DSLFKYYDEVK QKVD+
Subjt:  FSQEQSILQHFCEQELDHHPSNFFKETNTTVVVMDVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEVKSQKVDI

Query:  DLDQCSSPISIVFALMEESELPLSMLLDEIYEKMKKIKDG
        DL QCSS  SIV ALMEESEL LS L+DEIYEKMKKI +G
Subjt:  DLDQCSSPISIVFALMEESELPLSMLLDEIYEKMKKIKDG
A0A5A7UD17 Chromatin assembly factor 1 subunit FAS1 isoform X11.8e-3162.14Show/hide
Query:  FSQEQSILQHFCEQELDHHPSNFFKETNTTVVVMDVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEVKSQKVDI
        F Q Q   Q    Q+L+ HP +F        VVMDVDE S++SSTD Q  PR VQKR+R   E+ SLEK EREARIE +QKE+DSLFKYYDEVK QKVD+
Subjt:  FSQEQSILQHFCEQELDHHPSNFFKETNTTVVVMDVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEVKSQKVDI

Query:  DLDQCSSPISIVFALMEESELPLSMLLDEIYEKMKKIKDG
        DL  CSS  SIV ALMEESEL LS L+DEI+EKM+KI +G
Subjt:  DLDQCSSPISIVFALMEESELPLSMLLDEIYEKMKKIKDG
A0A5D3DJX2 Chromatin assembly factor 1 subunit FAS1 isoform X15.4e-2871.56Show/hide
Query:  VVMDVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEVKSQKVDIDLDQCSSPISIVFALMEESELPLSMLLDEIY
        VVMDVDE S++SSTD Q  PR VQKR+R   E+ SLEK EREARIE +QKE+DSLFKYYDEVK QKVD+DL  CSS  SIV ALMEESEL LS L+DEI+
Subjt:  VVMDVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEVKSQKVDIDLDQCSSPISIVFALMEESELPLSMLLDEIY

Query:  EKMKKIKDG
        EKM+KI +G
Subjt:  EKMKKIKDG
A0A6J1FBM8 chromatin assembly factor 1 subunit FAS16.4e-2968.81Show/hide
Query:  VVMDVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEVKSQKVDIDLDQCSSPISIVFALMEESELPLSMLLDEIY
        V MDVDE S+ SSTDGQN PR VQKR+R   E++  EK ER A+IE +QKE++SLFKYY+EVK QKVD+DL QCSS  S+V AL+EESELPLS L+DEIY
Subjt:  VVMDVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEVKSQKVDIDLDQCSSPISIVFALMEESELPLSMLLDEIY

Query:  EKMKKIKDG
        EKMKKI  G
Subjt:  EKMKKIKDG
A0A6J1HP33 chromatin assembly factor 1 subunit FAS12.4e-2866.97Show/hide
Query:  VVMDVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEVKSQKVDIDLDQCSSPISIVFALMEESELPLSMLLDEIY
        V MDVD+ S+ SSTDGQN PR VQKR+R   E++  EK ER A+IE +QKE+++LFKYY+EVK QKVD+DL QCSS  S+V AL+EESELPLS L+DEIY
Subjt:  VVMDVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEVKSQKVDIDLDQCSSPISIVFALMEESELPLSMLLDEIY

Query:  EKMKKIKDG
        EKMKKI  G
Subjt:  EKMKKIKDG
SwissProt top hitse value%identityAlignment
Q9SXY0 Chromatin assembly factor 1 subunit FAS17.1e-0940.57Show/hide
Query:  DVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEV--KSQKVDI--DLDQCSSPISIVFALMEESELPLSMLLDEI
        +V   +EN +      P+ + KR+R  T +++L   E+E++I  L  EM  LF Y+ EV  KS++ D+     +CSS  S+V  LMEE  LPLS L+DEI
Subjt:  DVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEV--KSQKVDI--DLDQCSSPISIVFALMEESELPLSMLLDEI

Query:  YEKMKK
        Y K+K+
Subjt:  YEKMKK
Arabidopsis top hitse value%identityAlignment
AT1G65470.1 chromatin assembly factor-1 (FASCIATA1) (FAS1)5.0e-1040.57Show/hide
Query:  DVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEV--KSQKVDI--DLDQCSSPISIVFALMEESELPLSMLLDEI
        +V   +EN +      P+ + KR+R  T +++L   E+E++I  L  EM  LF Y+ EV  KS++ D+     +CSS  S+V  LMEE  LPLS L+DEI
Subjt:  DVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEV--KSQKVDI--DLDQCSSPISIVFALMEESELPLSMLLDEI

Query:  YEKMKK
        Y K+K+
Subjt:  YEKMKK
AT1G65470.2 chromatin assembly factor-1 (FASCIATA1) (FAS1)5.0e-1040.57Show/hide
Query:  DVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEV--KSQKVDI--DLDQCSSPISIVFALMEESELPLSMLLDEI
        +V   +EN +      P+ + KR+R  T +++L   E+E++I  L  EM  LF Y+ EV  KS++ D+     +CSS  S+V  LMEE  LPLS L+DEI
Subjt:  DVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYYDEV--KSQKVDI--DLDQCSSPISIVFALMEESELPLSMLLDEI

Query:  YEKMKK
        Y K+K+
Subjt:  YEKMKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCGCCATATAGAACCCCATCGTGCCAAGCAACGCCAATTTCGTTTGGCGGGAAAAATCAGTTTTCTCAAGAACAATCGATCCTGCAACATTTCTGCGAACAAGAACTCGA
TCATCATCCTTCAAATTTCTTCAAGGAAACTAATACGACGGTGGTGGTGATGGACGTGGATGAGAATTCGGAAAATTCGAGTACGGATGGCCAAAATTGGCCACGGATGG
TCCAGAAGCGGGAGAGGAACCGCACGGAAATGGACAGTTTGGAAAAGGCAGAGAGAGAGGCGAGGATCGAGGTTCTTCAGAAGGAGATGGACAGCTTGTTTAAGTATTAC
GACGAAGTTAAGAGTCAGAAAGTGGATATTGATTTAGACCAATGTAGCTCTCCCATTTCGATTGTTTTCGCTCTTATGGAAGAGAGTGAACTACCATTGTCGATGCTTCT
TGATGAGATTTACGAGAAGATGAAGAAAATAAAAGATGGCGAT
mRNA sequenceShow/hide mRNA sequence
CCGCCATATAGAACCCCATCGTGCCAAGCAACGCCAATTTCGTTTGGCGGGAAAAATCAGTTTTCTCAAGAACAATCGATCCTGCAACATTTCTGCGAACAAGAACTCGA
TCATCATCCTTCAAATTTCTTCAAGGAAACTAATACGACGGTGGTGGTGATGGACGTGGATGAGAATTCGGAAAATTCGAGTACGGATGGCCAAAATTGGCCACGGATGG
TCCAGAAGCGGGAGAGGAACCGCACGGAAATGGACAGTTTGGAAAAGGCAGAGAGAGAGGCGAGGATCGAGGTTCTTCAGAAGGAGATGGACAGCTTGTTTAAGTATTAC
GACGAAGTTAAGAGTCAGAAAGTGGATATTGATTTAGACCAATGTAGCTCTCCCATTTCGATTGTTTTCGCTCTTATGGAAGAGAGTGAACTACCATTGTCGATGCTTCT
TGATGAGATTTACGAGAAGATGAAGAAAATAAAAGATGGCGAT
Protein sequenceShow/hide protein sequence
PPYRTPSCQATPISFGGKNQFSQEQSILQHFCEQELDHHPSNFFKETNTTVVVMDVDENSENSSTDGQNWPRMVQKRERNRTEMDSLEKAEREARIEVLQKEMDSLFKYY
DEVKSQKVDIDLDQCSSPISIVFALMEESELPLSMLLDEIYEKMKKIKDGD