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Carg21466 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21466
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription factor MYB102-like
Genome locationCarg_Chr13:7478678..7479223
RNA-Seq ExpressionCarg21466
SyntenyCarg21466
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AXF54217.1 MYB15 [Cucurbita pepo]1.5e-9298.34Show/hide
Query:  MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQ
        MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQN MQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISE CNNIEIPTGFDYCGFDQQ
Subjt:  MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQ

Query:  HAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM
        HAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFD+PDFFDESFM
Subjt:  HAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM
KAG6584037.1 Transcription factor MYB102, partial [Cucurbita argyrosperma subsp. sororia]2.0e-94100Show/hide
Query:  MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQ
        MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQ
Subjt:  MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQ

Query:  HAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM
        HAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM
Subjt:  HAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM
KAG7019650.1 hypothetical protein SDJN02_18613, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-94100Show/hide
Query:  MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQ
        MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQ
Subjt:  MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQ

Query:  HAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM
        HAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM
Subjt:  HAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM
XP_022927584.1 transcription factor MYB102-like [Cucurbita moschata]1.5e-9298.34Show/hide
Query:  MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQ
        MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQN MQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISE CNNIEIPTGFDYCGFDQQ
Subjt:  MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQ

Query:  HAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM
        HAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFD+PDFFDESFM
Subjt:  HAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM
XP_023519871.1 transcription factor MYB102-like [Cucurbita pepo subsp. pepo]1.5e-9298.34Show/hide
Query:  MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQ
        MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQN MQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISE CNNIEIPTGFDYCGFDQQ
Subjt:  MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQ

Query:  HAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM
        HAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFD+PDFFDESFM
Subjt:  HAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM
TrEMBL top hitse value%identityAlignment
A0A0A0LXA4 HTH myb-type domain-containing protein8.2e-5771.05Show/hide
Query:  MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQ----TIQFSHPQLEMQVPVQEIVQFP-QLVEP-IASELNDQWQISEGCNNIEIPTG-FD
        MNLSSLLGVQPLVNPELLKLAASLMSSERK+ SFSPQN       TIQFS+PQL+MQVP+QEIVQFP Q+VEP IASELND    +   NN ++ TG F+
Subjt:  MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQ----TIQFSHPQLEMQVPVQEIVQFP-QLVEP-IASELNDQWQISEGCNNIEIPTG-FD

Query:  YCGFDQQH--AAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM
        YCG DQQ    A  +DNSYE  TF+ H   GN  NNF+L SVLSSPCSSSPTQMNSNSTYFTSP EDERESYCSQILNF++ D FDE F+
Subjt:  YCGFDQQH--AAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM
A0A345BTG0 MYB157.1e-9398.34Show/hide
Query:  MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQ
        MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQN MQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISE CNNIEIPTGFDYCGFDQQ
Subjt:  MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQ

Query:  HAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM
        HAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFD+PDFFDESFM
Subjt:  HAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM
A0A5A7UQN0 Protein ODORANT1-like8.2e-5771.05Show/hide
Query:  MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQ----TIQFSHPQLEMQVPVQEIVQFP-QLVEP-IASELNDQWQISEGCNNIEIPTG-FD
        MNLSSLLGVQPLVNPELLKLAASLMSSERKS SFSPQN       TIQFS+PQL+MQVP+QEIVQFP Q+VEP I SELND    +   NN ++  G F+
Subjt:  MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQ----TIQFSHPQLEMQVPVQEIVQFP-QLVEP-IASELNDQWQISEGCNNIEIPTG-FD

Query:  YCGFDQQHAAAV--MDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM
        YCG DQQ  A    +DNSYE PTFS H    +N NNF+L SVLSSPCSSSPTQMNSNSTYFTSP EDERESYCSQILNF++ D FDE F+
Subjt:  YCGFDQQHAAAV--MDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM
A0A6J1EIE8 transcription factor MYB102-like7.1e-9398.34Show/hide
Query:  MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQ
        MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQN MQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISE CNNIEIPTGFDYCGFDQQ
Subjt:  MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQ

Query:  HAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM
        HAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFD+PDFFDESFM
Subjt:  HAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM
A0A6J1KNL9 transcription factor MYB102-like5.1e-9196.13Show/hide
Query:  MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQ
        MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQN MQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISE CNNI+IPTGFDYCGFDQQ
Subjt:  MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQ

Query:  HAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM
        HAAAVMDNSYEMPTFSSHKDMG+NKNNF+LSSV+SSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFD+PDFFDESFM
Subjt:  HAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM
SwissProt top hitse value%identityAlignment
Q9LDR8 Transcription factor MYB1023.7e-0630.39Show/hide
Query:  PLVNPELLKLAASLMS-SERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQHAAAVMDNS
        PLVNPE+LKLA SL S ++ ++      +R Q  Q  + Q  +            + + + S +      +   NN++      + GF +Q+  +    S
Subjt:  PLVNPELLKLAASLMS-SERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQHAAAVMDNS

Query:  YE---MPTFSSHK------DMGNNKNNFNL-SSVLSSPCSSSPTQMNSNSTYFTSPN---EDERESYCSQILNFDVPDFFD
         +    P+F+ +       D   +  +FN  +SVL++P SSSP+    NS+Y  S +   EDE ESYCS ++ FD+PDF D
Subjt:  YE---MPTFSSHK------DMGNNKNNFNL-SSVLSSPCSSSPTQMNSNSTYFTSPN---EDERESYCSQILNFDVPDFFD
Arabidopsis top hitse value%identityAlignment
AT4G05100.1 myb domain protein 744.7e-0429.03Show/hide
Query:  MNLSSLL----GVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCG
        MN+S L+      QPLVNPE+LKLA SL S++    +    N +   + +  Q    +P  E             EL   + I +   N +         
Subjt:  MNLSSLL----GVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCG

Query:  FDQQHAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYF----TSPNEDERESYCSQIL---NFDVPDF
         D       + NS       S  +        + +SVL++P SSSPT +NS+S+ +    T   EDE+ESY S  +   +FDV  F
Subjt:  FDQQHAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYF----TSPNEDERESYCSQIL---NFDVPDF
AT4G21440.1 MYB-like 1022.6e-0730.39Show/hide
Query:  PLVNPELLKLAASLMS-SERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQHAAAVMDNS
        PLVNPE+LKLA SL S ++ ++      +R Q  Q  + Q  +            + + + S +      +   NN++      + GF +Q+  +    S
Subjt:  PLVNPELLKLAASLMS-SERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQHAAAVMDNS

Query:  YE---MPTFSSHK------DMGNNKNNFNL-SSVLSSPCSSSPTQMNSNSTYFTSPN---EDERESYCSQILNFDVPDFFD
         +    P+F+ +       D   +  +FN  +SVL++P SSSP+    NS+Y  S +   EDE ESYCS ++ FD+PDF D
Subjt:  YE---MPTFSSHK------DMGNNKNNFNL-SSVLSSPCSSSPTQMNSNSTYFTSPN---EDERESYCSQILNFDVPDFFD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCTTTCAAGCTTGCTTGGAGTGCAGCCATTAGTAAACCCTGAGCTTCTTAAATTGGCTGCTTCATTAATGTCTTCTGAACGTAAAAGTCAAAGCTTTTCGCCGCA
AAATCGTATGCAGACTATTCAATTCTCTCATCCTCAGCTAGAAATGCAAGTTCCTGTACAAGAAATTGTTCAATTCCCTCAATTGGTGGAGCCAATTGCAAGCGAATTAA
ATGATCAATGGCAAATAAGCGAAGGCTGCAATAATATTGAGATTCCGACAGGGTTTGACTATTGTGGGTTTGATCAGCAACACGCCGCCGCAGTGATGGACAATTCGTAT
GAAATGCCGACGTTTAGTTCCCACAAAGACATGGGTAATAACAAGAACAACTTCAATTTGAGCTCGGTTTTATCTTCGCCATGTTCTTCAAGCCCTACGCAGATGAATTC
CAACTCCACATATTTTACTAGTCCAAATGAGGATGAGAGAGAAAGTTACTGTAGCCAGATTTTGAATTTTGATGTCCCTGATTTCTTTGATGAAAGTTTCATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACCTTTCAAGCTTGCTTGGAGTGCAGCCATTAGTAAACCCTGAGCTTCTTAAATTGGCTGCTTCATTAATGTCTTCTGAACGTAAAAGTCAAAGCTTTTCGCCGCA
AAATCGTATGCAGACTATTCAATTCTCTCATCCTCAGCTAGAAATGCAAGTTCCTGTACAAGAAATTGTTCAATTCCCTCAATTGGTGGAGCCAATTGCAAGCGAATTAA
ATGATCAATGGCAAATAAGCGAAGGCTGCAATAATATTGAGATTCCGACAGGGTTTGACTATTGTGGGTTTGATCAGCAACACGCCGCCGCAGTGATGGACAATTCGTAT
GAAATGCCGACGTTTAGTTCCCACAAAGACATGGGTAATAACAAGAACAACTTCAATTTGAGCTCGGTTTTATCTTCGCCATGTTCTTCAAGCCCTACGCAGATGAATTC
CAACTCCACATATTTTACTAGTCCAAATGAGGATGAGAGAGAAAGTTACTGTAGCCAGATTTTGAATTTTGATGTCCCTGATTTCTTTGATGAAAGTTTCATGTAA
Protein sequenceShow/hide protein sequence
MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQHAAAVMDNSY
EMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM