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Carg21468 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21468
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionWound-responsive family protein
Genome locationCarg_Chr13:7473766..7474017
RNA-Seq ExpressionCarg21468
SyntenyCarg21468
Gene Ontology termsNA
InterPro domainsIPR022251 - Protein of unknown function wound-induced


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY28437.1 Uncharacterized protein TCM_030005 [Theobroma cacao]5.6e-0751.16Show/hide
Query:  MSYLSRACMAAASVAVVEGGHADHFSKWNS--ETLFRSKRRFQNEDTASQE-LGAGSTGIGKDGEKVVKAEDSLHKVMYLNCWTQS
        MSYLSR CM AASVA VE GH D  SKWNS    +  SKRR+ +  ++S + L A       +G    ++E+SL +VMYLNCWTQS
Subjt:  MSYLSRACMAAASVAVVEGGHADHFSKWNS--ETLFRSKRRFQNEDTASQE-LGAGSTGIGKDGEKVVKAEDSLHKVMYLNCWTQS

KAA0056938.1 hypothetical protein E6C27_scaffold96G001150 [Cucumis melo var. makuwa]5.1e-0845.1Show/hide
Query:  MAAASVAVVEGGHADH----FSKWNS----ETLFRSK-RRFQNED--TASQELGA----------------GSTGIGKDGEKVVKAEDSLHKVMYLNCWT
        M AASV V+E  HA++    FSKWN+    +++F+SK   FQ  D   A+Q+LGA                G  G G  G+ + +AEDSLHKVMYLNCWT
Subjt:  MAAASVAVVEGGHADH----FSKWNS----ETLFRSK-RRFQNED--TASQELGA----------------GSTGIGKDGEKVVKAEDSLHKVMYLNCWT

Query:  QS
        QS
Subjt:  QS

KAG6584036.1 hypothetical protein SDJN03_19968, partial [Cucurbita argyrosperma subsp. sororia]5.6e-39100Show/hide
Query:  MSYLSRACMAAASVAVVEGGHADHFSKWNSETLFRSKRRFQNEDTASQELGAGSTGIGKDGEKVVKAEDSLHKVMYLNCWTQS
        MSYLSRACMAAASVAVVEGGHADHFSKWNSETLFRSKRRFQNEDTASQELGAGSTGIGKDGEKVVKAEDSLHKVMYLNCWTQS
Subjt:  MSYLSRACMAAASVAVVEGGHADHFSKWNSETLFRSKRRFQNEDTASQELGAGSTGIGKDGEKVVKAEDSLHKVMYLNCWTQS

KAG7019648.1 hypothetical protein SDJN02_18611, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-39100Show/hide
Query:  MSYLSRACMAAASVAVVEGGHADHFSKWNSETLFRSKRRFQNEDTASQELGAGSTGIGKDGEKVVKAEDSLHKVMYLNCWTQS
        MSYLSRACMAAASVAVVEGGHADHFSKWNSETLFRSKRRFQNEDTASQELGAGSTGIGKDGEKVVKAEDSLHKVMYLNCWTQS
Subjt:  MSYLSRACMAAASVAVVEGGHADHFSKWNSETLFRSKRRFQNEDTASQELGAGSTGIGKDGEKVVKAEDSLHKVMYLNCWTQS

XP_009763651.1 PREDICTED: uncharacterized protein LOC104215531 [Nicotiana sylvestris]1.1e-0545.36Show/hide
Query:  MSYLSRACMAAASVAVVEGGHADHFSKWNS--ETLFRSKRRFQNEDTASQE---------LGA---GSTGIGKDGEKVVKAEDSLHKVMYLNCWTQS
        MSYL+R    AA+VAVV  GH+DH  K  S  ++L  SK+RF +  T+S           LG+   G  G G   EK  +A+DSL +VMYLNCW QS
Subjt:  MSYLSRACMAAASVAVVEGGHADHFSKWNS--ETLFRSKRRFQNEDTASQE---------LGA---GSTGIGKDGEKVVKAEDSLHKVMYLNCWTQS

TrEMBL top hitse value%identityAlignment
A0A061GGZ2 Uncharacterized protein2.7e-0751.16Show/hide
Query:  MSYLSRACMAAASVAVVEGGHADHFSKWNS--ETLFRSKRRFQNEDTASQE-LGAGSTGIGKDGEKVVKAEDSLHKVMYLNCWTQS
        MSYLSR CM AASVA VE GH D  SKWNS    +  SKRR+ +  ++S + L A       +G    ++E+SL +VMYLNCWTQS
Subjt:  MSYLSRACMAAASVAVVEGGHADHFSKWNS--ETLFRSKRRFQNEDTASQE-LGAGSTGIGKDGEKVVKAEDSLHKVMYLNCWTQS

A0A0A0LS84 Uncharacterized protein5.0e-0949.47Show/hide
Query:  MSYLSRACMAAASVAVVEGGHADHFSKWNSETLFRSK-RRFQ--NEDTASQELGA---------GSTGIGKDGEKVVKAEDSLHKVMYLNCWTQS
        MSYL RA M AASV V+E  +A +    +   +F+SK ++FQ   E  A+QELGA         G  G G+ G+++ +AEDSLHKVMYLNCWTQS
Subjt:  MSYLSRACMAAASVAVVEGGHADHFSKWNSETLFRSK-RRFQ--NEDTASQELGA---------GSTGIGKDGEKVVKAEDSLHKVMYLNCWTQS

A0A1U7VFI3 uncharacterized protein LOC1042155315.1e-0645.36Show/hide
Query:  MSYLSRACMAAASVAVVEGGHADHFSKWNS--ETLFRSKRRFQNEDTASQE---------LGA---GSTGIGKDGEKVVKAEDSLHKVMYLNCWTQS
        MSYL+R    AA+VAVV  GH+DH  K  S  ++L  SK+RF +  T+S           LG+   G  G G   EK  +A+DSL +VMYLNCW QS
Subjt:  MSYLSRACMAAASVAVVEGGHADHFSKWNS--ETLFRSKRRFQNEDTASQE---------LGA---GSTGIGKDGEKVVKAEDSLHKVMYLNCWTQS

A0A5A7UPA3 Uncharacterized protein2.5e-0845.1Show/hide
Query:  MAAASVAVVEGGHADH----FSKWNS----ETLFRSK-RRFQNED--TASQELGA----------------GSTGIGKDGEKVVKAEDSLHKVMYLNCWT
        M AASV V+E  HA++    FSKWN+    +++F+SK   FQ  D   A+Q+LGA                G  G G  G+ + +AEDSLHKVMYLNCWT
Subjt:  MAAASVAVVEGGHADH----FSKWNS----ETLFRSK-RRFQNED--TASQELGA----------------GSTGIGKDGEKVVKAEDSLHKVMYLNCWT

Query:  QS
        QS
Subjt:  QS

A0A5D2KX44 Uncharacterized protein4.3e-0544.58Show/hide
Query:  MSYLSRACMAAASVAVVEGGHADHFSKWNSETLFRSKRRFQNEDTASQELGAGSTGIGKDGEKVVKAEDSLHKVMYLNCWTQS
        MSYLSR CM AASVA VE GH D  SKW+S     +  +  +  TA+            +     ++E+SL +VMYLNCWTQS
Subjt:  MSYLSRACMAAASVAVVEGGHADHFSKWNSETLFRSKRRFQNEDTASQELGAGSTGIGKDGEKVVKAEDSLHKVMYLNCWTQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTATTTGAGCAGAGCATGTATGGCCGCCGCTAGTGTGGCCGTGGTGGAAGGTGGCCATGCCGATCACTTCTCCAAATGGAACTCTGAAACTCTTTTTCGGTCCAA
GCGGCGATTTCAGAACGAGGACACGGCGTCTCAGGAGCTCGGCGCCGGCAGCACTGGGATTGGAAAAGATGGGGAGAAGGTGGTAAAGGCTGAAGATTCTCTTCATAAAG
TCATGTACTTGAATTGCTGGACACAGAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTATTTGAGCAGAGCATGTATGGCCGCCGCTAGTGTGGCCGTGGTGGAAGGTGGCCATGCCGATCACTTCTCCAAATGGAACTCTGAAACTCTTTTTCGGTCCAA
GCGGCGATTTCAGAACGAGGACACGGCGTCTCAGGAGCTCGGCGCCGGCAGCACTGGGATTGGAAAAGATGGGGAGAAGGTGGTAAAGGCTGAAGATTCTCTTCATAAAG
TCATGTACTTGAATTGCTGGACACAGAGCTGA
Protein sequenceShow/hide protein sequence
MSYLSRACMAAASVAVVEGGHADHFSKWNSETLFRSKRRFQNEDTASQELGAGSTGIGKDGEKVVKAEDSLHKVMYLNCWTQS