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Carg21520 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21520
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionnegative regulator of systemic acquired resistance SNI1
Genome locationCarg_Chr13:7171472..7172453
RNA-Seq ExpressionCarg21520
SyntenyCarg21520
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583973.1 Negative regulator of systemic acquired resistance SNI1, partial [Cucurbita argyrosperma subsp. sororia]2.7e-07100Show/hide
Query:  KHTRDADDDRIAFLEAVRAASLLPENKSPPT
        KHTRDADDDRIAFLEAVRAASLLPENKSPPT
Subjt:  KHTRDADDDRIAFLEAVRAASLLPENKSPPT

KAG7019597.1 hypothetical protein SDJN02_18560, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-59100Show/hide
Query:  MYKLVLHICVLSLTCPTQFTFSSINSNQASAPVGLDSLSTWFGFRFGPFHQRPAKQWRNLAAAFEGRSRRIPWLFSTHPKLLKHTRDADDDRIAFLEAVR
        MYKLVLHICVLSLTCPTQFTFSSINSNQASAPVGLDSLSTWFGFRFGPFHQRPAKQWRNLAAAFEGRSRRIPWLFSTHPKLLKHTRDADDDRIAFLEAVR
Subjt:  MYKLVLHICVLSLTCPTQFTFSSINSNQASAPVGLDSLSTWFGFRFGPFHQRPAKQWRNLAAAFEGRSRRIPWLFSTHPKLLKHTRDADDDRIAFLEAVR

Query:  AASLLPENKSPPTL
        AASLLPENKSPPTL
Subjt:  AASLLPENKSPPTL

XP_022927209.1 negative regulator of systemic acquired resistance SNI1 [Cucurbita moschata]9.1e-08100Show/hide
Query:  KHTRDADDDRIAFLEAVRAASLLPENKSPPTL
        KHTRDADDDRIAFLEAVRAASLLPENKSPPTL
Subjt:  KHTRDADDDRIAFLEAVRAASLLPENKSPPTL

XP_023001716.1 negative regulator of systemic acquired resistance SNI1 [Cucurbita maxima]2.7e-07100Show/hide
Query:  KHTRDADDDRIAFLEAVRAASLLPENKSPPT
        KHTRDADDDRIAFLEAVRAASLLPENKSPPT
Subjt:  KHTRDADDDRIAFLEAVRAASLLPENKSPPT

XP_023519774.1 negative regulator of systemic acquired resistance SNI1 [Cucurbita pepo subsp. pepo]2.7e-07100Show/hide
Query:  KHTRDADDDRIAFLEAVRAASLLPENKSPPT
        KHTRDADDDRIAFLEAVRAASLLPENKSPPT
Subjt:  KHTRDADDDRIAFLEAVRAASLLPENKSPPT

TrEMBL top hitse value%identityAlignment
A0A1S3B6E1 uncharacterized protein LOC103486681 isoform X21.3e-07100Show/hide
Query:  KHTRDADDDRIAFLEAVRAASLLPENKSPPT
        KHTRDADDDRIAFLEAVRAASLLPENKSPPT
Subjt:  KHTRDADDDRIAFLEAVRAASLLPENKSPPT

A0A1S3B7L2 uncharacterized protein LOC103486681 isoform X11.3e-07100Show/hide
Query:  KHTRDADDDRIAFLEAVRAASLLPENKSPPT
        KHTRDADDDRIAFLEAVRAASLLPENKSPPT
Subjt:  KHTRDADDDRIAFLEAVRAASLLPENKSPPT

A0A6J1CFB0 negative regulator of systemic acquired resistance SNI1 isoform X28.3e-0793.55Show/hide
Query:  KHTRDADDDRIAFLEAVRAASLLPENKSPPT
        KHTRDADDDRIAFLEAVRA SLLPENK+PPT
Subjt:  KHTRDADDDRIAFLEAVRAASLLPENKSPPT

A0A6J1EHD6 negative regulator of systemic acquired resistance SNI14.4e-08100Show/hide
Query:  KHTRDADDDRIAFLEAVRAASLLPENKSPPTL
        KHTRDADDDRIAFLEAVRAASLLPENKSPPTL
Subjt:  KHTRDADDDRIAFLEAVRAASLLPENKSPPTL

A0A6J1KJD7 negative regulator of systemic acquired resistance SNI11.3e-07100Show/hide
Query:  KHTRDADDDRIAFLEAVRAASLLPENKSPPT
        KHTRDADDDRIAFLEAVRAASLLPENKSPPT
Subjt:  KHTRDADDDRIAFLEAVRAASLLPENKSPPT

SwissProt top hitse value%identityAlignment
Q9SWA6 Negative regulator of systemic acquired resistance SNI11.3e-0467.74Show/hide
Query:  KHTRDADDDRIAFLEAVRAASLLPENKSPPT
        K +RDA++DR+ +LEAVRAASL+PEN  PPT
Subjt:  KHTRDADDDRIAFLEAVRAASLLPENKSPPT

Arabidopsis top hitse value%identityAlignment
AT4G18470.1 negative regulator of systemic acquired resistance (SNI1)9.1e-0667.74Show/hide
Query:  KHTRDADDDRIAFLEAVRAASLLPENKSPPT
        K +RDA++DR+ +LEAVRAASL+PEN  PPT
Subjt:  KHTRDADDDRIAFLEAVRAASLLPENKSPPT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATAAATTAGTGTTGCACATTTGTGTTCTAAGTCTCACATGCCCAACTCAGTTTACATTCAGCTCAATCAACTCTAACCAGGCAAGTGCTCCGGTCGGGCTCGATTC
TCTGTCCACATGGTTCGGTTTTCGTTTTGGACCGTTCCACCAGAGGCCGGCAAAGCAATGGAGAAACCTAGCAGCGGCGTTCGAGGGGCGATCGAGGCGAATACCTTGGC
TATTCTCGACGCATCCGAAGCTACTAAAGCACACTCGAGACGCGGACGATGACAGAATTGCTTTTCTCGAAGCTGTTCGTGCGGCTTCACTTTTGCCAGAAAATAAATCG
CCACCGACATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATAAATTAGTGTTGCACATTTGTGTTCTAAGTCTCACATGCCCAACTCAGTTTACATTCAGCTCAATCAACTCTAACCAGGCAAGTGCTCCGGTCGGGCTCGATTC
TCTGTCCACATGGTTCGGTTTTCGTTTTGGACCGTTCCACCAGAGGCCGGCAAAGCAATGGAGAAACCTAGCAGCGGCGTTCGAGGGGCGATCGAGGCGAATACCTTGGC
TATTCTCGACGCATCCGAAGCTACTAAAGCACACTCGAGACGCGGACGATGACAGAATTGCTTTTCTCGAAGCTGTTCGTGCGGCTTCACTTTTGCCAGAAAATAAATCG
CCACCGACATTGTAA
Protein sequenceShow/hide protein sequence
MYKLVLHICVLSLTCPTQFTFSSINSNQASAPVGLDSLSTWFGFRFGPFHQRPAKQWRNLAAAFEGRSRRIPWLFSTHPKLLKHTRDADDDRIAFLEAVRAASLLPENKS
PPTL