; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg21522 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21522
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionD-aminoacyl-tRNA deacylase
Genome locationCarg_Chr13:7164458..7165951
RNA-Seq ExpressionCarg21522
SyntenyCarg21522
Gene Ontology termsGO:0106074 - aminoacyl-tRNA metabolism involved in translational fidelity (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0000049 - tRNA binding (molecular function)
GO:0051500 - D-tyrosyl-tRNA(Tyr) deacylase activity (molecular function)
InterPro domainsIPR003732 - D-aminoacyl-tRNA deacylase DTD
IPR023509 - D-aminoacyl-tRNA deacylase-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019590.1 D-tyrosyl-tRNA(Tyr) deacylase, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-6171Show/hide
Query:  MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLN
        MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLN
Subjt:  MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLN

Query:  VMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGMLKGNKPTFMWQCLPKSQTLLCFCG----------------------REVNLVNDGQSQVMQIESQPS
        VMQKNYEVLL              VSQFTLYGMLKGNKP F    +P  +    +                         +VNLVNDG    MQIESQPS
Subjt:  VMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGMLKGNKPTFMWQCLPKSQTLLCFCG----------------------REVNLVNDGQSQVMQIESQPS

KAG7019595.1 D-tyrosyl-tRNA(Tyr) deacylase, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-102100Show/hide
Query:  MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLN
        MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLN
Subjt:  MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLN

Query:  VMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGMLKGNKPTFMWQCLPKSQTLLCFCGREVNLVNDGQSQVMQIESQPSKDQSKPQRLC
        VMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGMLKGNKPTFMWQCLPKSQTLLCFCGREVNLVNDGQSQVMQIESQPSKDQSKPQRLC
Subjt:  VMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGMLKGNKPTFMWQCLPKSQTLLCFCGREVNLVNDGQSQVMQIESQPSKDQSKPQRLC

XP_022927221.1 D-aminoacyl-tRNA deacylase-like [Cucurbita moschata]2.8e-6270.79Show/hide
Query:  MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLN
        MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLN
Subjt:  MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLN

Query:  VMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGMLKGNKPTFMWQCLPKSQTLLCFCG----------------------REVNLVNDGQSQVMQIESQPS
        VMQKNYEVLL              VSQFTLYGMLKGNKP F    +P  +    +                         +VNLVNDG    MQIESQPS
Subjt:  VMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGMLKGNKPTFMWQCLPKSQTLLCFCG----------------------REVNLVNDGQSQVMQIESQPS

Query:  KD
        K+
Subjt:  KD

XP_023001753.1 D-aminoacyl-tRNA deacylase-like [Cucurbita maxima]1.2e-6068.81Show/hide
Query:  MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLN
        MNSVAYLPLFAASVGTKRTT FSNK+KIQPIRSMRAVVQRV SASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLN
Subjt:  MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLN

Query:  VMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGMLKGNKPTFMWQCLPKSQTLLCFCG----------------------REVNLVNDGQSQVMQIESQPS
        VMQKNYEVLL              VSQFTLYGMLKGNKP F    +P  +    +                         +VNLVNDG    MQI+SQPS
Subjt:  VMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGMLKGNKPTFMWQCLPKSQTLLCFCG----------------------REVNLVNDGQSQVMQIESQPS

Query:  KD
        K+
Subjt:  KD

XP_023519775.1 D-aminoacyl-tRNA deacylase-like [Cucurbita pepo subsp. pepo]9.0e-6170.15Show/hide
Query:  MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLN
        MNSVAYLPLFAASVGTK TT FSNK+KIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLN
Subjt:  MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLN

Query:  VMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGMLKGNKPTFMWQCLPKS-----QTLLCFCGR----------------EVNLVNDGQSQVMQIESQPSK
        VMQKNYEVLL              VSQFTLYGMLKGNKP F     P+       +++   G+                +VNLVNDG    MQIESQPSK
Subjt:  VMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGMLKGNKPTFMWQCLPKS-----QTLLCFCGR----------------EVNLVNDGQSQVMQIESQPSK

Query:  D
        +
Subjt:  D

TrEMBL top hitse value%identityAlignment
A0A0A0LS01 D-aminoacyl-tRNA deacylase1.0e-5464.04Show/hide
Query:  MNSVAYLPLFAASVGTKRTTVFS-NKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDL
        MNSVA LPLFAASV TKRTTVF  +  K++PIRSMRAVVQRVASASV+VDGRTVSEIGPGLLVLVGLHDSDS++DAEYICRKVLNMRLFPN+STGKAWDL
Subjt:  MNSVAYLPLFAASVGTKRTTVFS-NKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDL

Query:  NVMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGMLKGNKPTFMWQCLPKSQTLLCFCG----------------------REVNLVNDGQSQVMQIESQP
        NVMQKNYEVLL              VSQFTLYGMLKGNKP F    +P  +    +                         +VNLVNDG    MQI+SQP
Subjt:  NVMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGMLKGNKPTFMWQCLPKSQTLLCFCG----------------------REVNLVNDGQSQVMQIESQP

Query:  SKD
        SK+
Subjt:  SKD

A0A1S3B6T2 D-aminoacyl-tRNA deacylase2.1e-5564.22Show/hide
Query:  MNSVAYLPLFAASVGTKRTTV--FSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWD
        MNSVA LPLFAASV TKRTT+  FSN RK+ PIRSMRAVVQRVASASV+VDGRTVSEIGPGLLVLVGLH+SDS++DAEYICRKVLNMRLFPN+STGKAWD
Subjt:  MNSVAYLPLFAASVGTKRTTV--FSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWD

Query:  LNVMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGMLKGNKPTFMWQCLPKSQTLLCFCG----------------------REVNLVNDGQSQVMQIESQ
        LNVMQKNYEVLL              VSQFTLYGMLKGNKP F    +P  +    +                         +VNLVNDG    MQI+SQ
Subjt:  LNVMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGMLKGNKPTFMWQCLPKSQTLLCFCG----------------------REVNLVNDGQSQVMQIESQ

Query:  PSKD
        PSK+
Subjt:  PSKD

A0A5A7UU37 D-aminoacyl-tRNA deacylase2.1e-5564.22Show/hide
Query:  MNSVAYLPLFAASVGTKRTTV--FSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWD
        MNSVA LPLFAASV TKRTT+  FSN RK+ PIRSMRAVVQRVASASV+VDGRTVSEIGPGLLVLVGLH+SDS++DAEYICRKVLNMRLFPN+STGKAWD
Subjt:  MNSVAYLPLFAASVGTKRTTV--FSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWD

Query:  LNVMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGMLKGNKPTFMWQCLPKSQTLLCFCG----------------------REVNLVNDGQSQVMQIESQ
        LNVMQKNYEVLL              VSQFTLYGMLKGNKP F    +P  +    +                         +VNLVNDG    MQI+SQ
Subjt:  LNVMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGMLKGNKPTFMWQCLPKSQTLLCFCG----------------------REVNLVNDGQSQVMQIESQ

Query:  PSKD
        PSK+
Subjt:  PSKD

A0A6J1EH34 D-aminoacyl-tRNA deacylase1.4e-6270.79Show/hide
Query:  MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLN
        MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLN
Subjt:  MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLN

Query:  VMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGMLKGNKPTFMWQCLPKSQTLLCFCG----------------------REVNLVNDGQSQVMQIESQPS
        VMQKNYEVLL              VSQFTLYGMLKGNKP F    +P  +    +                         +VNLVNDG    MQIESQPS
Subjt:  VMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGMLKGNKPTFMWQCLPKSQTLLCFCG----------------------REVNLVNDGQSQVMQIESQPS

Query:  KD
        K+
Subjt:  KD

A0A6J1KRG2 D-aminoacyl-tRNA deacylase5.7e-6168.81Show/hide
Query:  MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLN
        MNSVAYLPLFAASVGTKRTT FSNK+KIQPIRSMRAVVQRV SASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLN
Subjt:  MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLN

Query:  VMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGMLKGNKPTFMWQCLPKSQTLLCFCG----------------------REVNLVNDGQSQVMQIESQPS
        VMQKNYEVLL              VSQFTLYGMLKGNKP F    +P  +    +                         +VNLVNDG    MQI+SQPS
Subjt:  VMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGMLKGNKPTFMWQCLPKSQTLLCFCG----------------------REVNLVNDGQSQVMQIESQPS

Query:  KD
        K+
Subjt:  KD

SwissProt top hitse value%identityAlignment
Q2T9V8 D-aminoacyl-tRNA deacylase 15.7e-1847.22Show/hide
Query:  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGM
        M+AVVQRV  ASV V G  +S IG G+ VL+G+   D++ + E++ RK+LN+R+F ++S GK W  +VM K YEVL               VSQFTL  +
Subjt:  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGM

Query:  LKGNKPTF
        LKGNKP F
Subjt:  LKGNKPTF

Q54EY1 D-aminoacyl-tRNA deacylase1.6e-2043.48Show/hide
Query:  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGM
        M+A++QRV S+SV V+G  +SEI  GL+ L+G+   D++ DAEYI RK+LN+RL+ N+   K WD +V Q +YE+L               VSQFTL+  
Subjt:  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGM

Query:  LKGNKPTFMWQCLPK
        LKGNK ++     P+
Subjt:  LKGNKPTFMWQCLPK

Q8TEA8 D-aminoacyl-tRNA deacylase 17.5e-1846.3Show/hide
Query:  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGM
        M+AVVQRV  ASV V G  +S IG G+ VL+G+   D++ + E++ RK+LN+R+F ++S GK W  +VM K YE+L               VSQFTL  +
Subjt:  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGM

Query:  LKGNKPTF
        LKGNKP F
Subjt:  LKGNKPTF

Q9DD18 D-aminoacyl-tRNA deacylase 12.0e-1848.15Show/hide
Query:  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGM
        M+AVVQRV  ASV V G  +S IG G+ VL+G+   DS+ + E++ RK+LN+R+F ++S GK W  +VM K YEVL               VSQFTL  +
Subjt:  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGM

Query:  LKGNKPTF
        LKGNKP F
Subjt:  LKGNKPTF

Q9VGP0 D-aminoacyl-tRNA deacylase5.7e-1848.62Show/hide
Query:  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGM
        MRAV+QRV +A V V    VS IGPGL VLVG+  SD+  D EY+ RK+L +RLF  +  GK W  +V   N E+L               VSQFTLY  
Subjt:  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGM

Query:  LKGNKPTFM
        LKGNKP F+
Subjt:  LKGNKPTFM

Arabidopsis top hitse value%identityAlignment
AT4G18460.1 D-Tyr-tRNA(Tyr) deacylase family protein5.7e-3769.44Show/hide
Query:  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGM
        MRAV+QRV+S+SV VDGR VSEIGPGLLVL+G+H+SD+ESDA+YICRKVLNMRLF N++TGK WD NVMQ+NY VLL              VSQFTLYG 
Subjt:  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLESIHLLTIPGGWQPVSQFTLYGM

Query:  LKGNKPTF
        LKGNKP F
Subjt:  LKGNKPTF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAGCGTAGCATACCTGCCATTGTTCGCAGCCAGCGTAGGTACGAAGCGAACCACAGTGTTCAGCAACAAAAGGAAAATACAGCCGATTAGATCCATGAGAGCTGT
TGTTCAGAGAGTCGCCTCTGCAAGCGTCGAGGTCGATGGCCGCACCGTTTCAGAGATTGGGCCGGGCCTCCTCGTGCTCGTCGGCCTTCATGATTCCGACTCCGAATCCG
ACGCCGAATACATATGCCGTAAGGTCCTAAATATGAGGTTGTTTCCAAATCAGAGTACCGGCAAAGCTTGGGACTTAAACGTAATGCAGAAAAACTACGAGGTTCTATTA
GAGTCAATCCACTTATTAACTATACCCGGTGGATGGCAACCAGTTAGTCAGTTTACACTGTATGGAATGTTGAAGGGCAACAAGCCGACTTTCATGTGGCAATGCCTCCC
AAAGAGCCAAACCCTTCTATGCTTCTGTGGTCGAGAGGTCAATTTGGTGAATGATGGCCAGTCACAGGTAATGCAGATCGAGTCCCAACCGTCTAAAGATCAGAGCAAGC
CGCAAAGGCTTTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACAGCGTAGCATACCTGCCATTGTTCGCAGCCAGCGTAGGTACGAAGCGAACCACAGTGTTCAGCAACAAAAGGAAAATACAGCCGATTAGATCCATGAGAGCTGT
TGTTCAGAGAGTCGCCTCTGCAAGCGTCGAGGTCGATGGCCGCACCGTTTCAGAGATTGGGCCGGGCCTCCTCGTGCTCGTCGGCCTTCATGATTCCGACTCCGAATCCG
ACGCCGAATACATATGCCGTAAGGTCCTAAATATGAGGTTGTTTCCAAATCAGAGTACCGGCAAAGCTTGGGACTTAAACGTAATGCAGAAAAACTACGAGGTTCTATTA
GAGTCAATCCACTTATTAACTATACCCGGTGGATGGCAACCAGTTAGTCAGTTTACACTGTATGGAATGTTGAAGGGCAACAAGCCGACTTTCATGTGGCAATGCCTCCC
AAAGAGCCAAACCCTTCTATGCTTCTGTGGTCGAGAGGTCAATTTGGTGAATGATGGCCAGTCACAGGTAATGCAGATCGAGTCCCAACCGTCTAAAGATCAGAGCAAGC
CGCAAAGGCTTTGCTAA
Protein sequenceShow/hide protein sequence
MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLL
ESIHLLTIPGGWQPVSQFTLYGMLKGNKPTFMWQCLPKSQTLLCFCGREVNLVNDGQSQVMQIESQPSKDQSKPQRLC