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Carg21543 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21543
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionimportin-9
Genome locationCarg_Chr18:10359620..10364951
RNA-Seq ExpressionCarg21543
SyntenyCarg21543
Gene Ontology termsGO:0006606 - protein import into nucleus (biological process)
GO:0005635 - nuclear envelope (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0031267 - small GTPase binding (molecular function)
InterPro domainsIPR016024 - Armadillo-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574009.1 hypothetical protein SDJN03_27896, partial [Cucurbita argyrosperma subsp. sororia]7.2e-14100Show/hide
Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPG
        MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPG
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPG
KAG7013068.1 hypothetical protein SDJN02_25824, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-65100Show/hide
Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGHNDPTSFGCGIDSLQLAATSSWFTAPTDVSASGLSILHHGTRESNLAALSRNFYFRFD
        MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGHNDPTSFGCGIDSLQLAATSSWFTAPTDVSASGLSILHHGTRESNLAALSRNFYFRFD
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGHNDPTSFGCGIDSLQLAATSSWFTAPTDVSASGLSILHHGTRESNLAALSRNFYFRFD

Query:  PQKETKSGGEFDCFCDDLILAIISGL
        PQKETKSGGEFDCFCDDLILAIISGL
Subjt:  PQKETKSGGEFDCFCDDLILAIISGL
XP_023897440.1 importin-9-like, partial [Quercus suber]1.0e-1285.42Show/hide
Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGHNDPTS
        MANVIDQDQQWLLNCLSATLDPN EVRSFAE SLNQASLQPG     S
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGHNDPTS
XP_030960171.1 importin-9 isoform X2 [Quercus lobata]1.0e-1285.42Show/hide
Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGHNDPTS
        MANVIDQDQQWLLNCLSATLDPN EVRSFAE SLNQASLQPG     S
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGHNDPTS
XP_038892157.1 importin-9 [Benincasa hispida]8.0e-1390.48Show/hide
Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPG
        MAN++DQDQQWL+NCLSATLDPNQEVRSFAE SLNQASLQPG
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPG
TrEMBL top hitse value%identityAlignment
A0A067JZD1 Importin N-terminal domain-containing protein5.0e-1390.48Show/hide
Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPG
        MAN++DQDQQWLLNCL+ATLDPNQEVRSFAE SLNQASLQPG
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPG
A0A0A0KQZ8 Importin N-terminal domain-containing protein8.6e-1392.86Show/hide
Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPG
        MANVIDQDQQWL+NCLSATLDPN EVRSFAE SLNQASLQPG
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPG
A0A1S3BFX2 importin-9 isoform X28.6e-1392.86Show/hide
Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPG
        MANVIDQDQQWL+NCLSATLDPN EVRSFAE SLNQASLQPG
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPG
A0A5A7SZ00 Importin-9 isoform X18.6e-1392.86Show/hide
Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPG
        MANVIDQDQQWL+NCLSATLDPN EVRSFAE SLNQASLQPG
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPG
A0A5D3CB26 Importin-9 isoform X18.6e-1392.86Show/hide
Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPG
        MANVIDQDQQWL+NCLSATLDPN EVRSFAE SLNQASLQPG
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G26170.1 ARM repeat superfamily protein2.6e-1489.74Show/hide
Query:  VIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPG
        V+DQDQQWLL CLSA+LDPNQ VRSFAETSLNQASLQPG
Subjt:  VIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAATGTGATTGATCAAGATCAACAGTGGCTTCTCAATTGCTTGTCCGCCACTCTTGACCCCAACCAGGAGGTTCGCTCATTCGCTGAAACCTCGCTAAATCAGGC
ATCTCTCCAACCAGGGCATAATGATCCTACAAGTTTTGGGTGTGGAATCGATAGTCTTCAGCTTGCTGCTACTTCAAGTTGGTTTACAGCTCCCACTGATGTTAGTGCCA
GTGGCTTAAGCATCTTGCACCATGGAACTCGGGAATCAAACTTGGCTGCTCTTTCGAGGAATTTCTATTTCCGTTTCGATCCTCAGAAAGAAACAAAGTCTGGAGGTGAA
TTTGATTGTTTCTGTGATGATCTGATTTTAGCTATAATCTCTGGATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAATGTGATTGATCAAGATCAACAGTGGCTTCTCAATTGCTTGTCCGCCACTCTTGACCCCAACCAGGAGGTTCGCTCATTCGCTGAAACCTCGCTAAATCAGGC
ATCTCTCCAACCAGGGCATAATGATCCTACAAGTTTTGGGTGTGGAATCGATAGTCTTCAGCTTGCTGCTACTTCAAGTTGGTTTACAGCTCCCACTGATGTTAGTGCCA
GTGGCTTAAGCATCTTGCACCATGGAACTCGGGAATCAAACTTGGCTGCTCTTTCGAGGAATTTCTATTTCCGTTTCGATCCTCAGAAAGAAACAAAGTCTGGAGGTGAA
TTTGATTGTTTCTGTGATGATCTGATTTTAGCTATAATCTCTGGATTGTGA
Protein sequenceShow/hide protein sequence
MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGHNDPTSFGCGIDSLQLAATSSWFTAPTDVSASGLSILHHGTRESNLAALSRNFYFRFDPQKETKSGGE
FDCFCDDLILAIISGL