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Carg21547 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21547
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr18:10335756..10336808
RNA-Seq ExpressionCarg21547
SyntenyCarg21547
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013064.1 hypothetical protein SDJN02_25820, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-102100Show/hide
Query:  MDTRSSWVNIFPYSTFSSGTDELRHEIISFAKDYKRLNATNSVVFEGFTIAKWRGRDGETDKSQRERNGEEERPYLFCCGALMKVIDFRASFLSFVILIE
        MDTRSSWVNIFPYSTFSSGTDELRHEIISFAKDYKRLNATNSVVFEGFTIAKWRGRDGETDKSQRERNGEEERPYLFCCGALMKVIDFRASFLSFVILIE
Subjt:  MDTRSSWVNIFPYSTFSSGTDELRHEIISFAKDYKRLNATNSVVFEGFTIAKWRGRDGETDKSQRERNGEEERPYLFCCGALMKVIDFRASFLSFVILIE

Query:  RAQSPMAGARLTARLFGRASPAQILDVIPKLIVALTILQHNRTMKYNGVAPVHPSSSPELLSSNRKHLTSAIRKIVPLEMKCPNLVAQQRKL
        RAQSPMAGARLTARLFGRASPAQILDVIPKLIVALTILQHNRTMKYNGVAPVHPSSSPELLSSNRKHLTSAIRKIVPLEMKCPNLVAQQRKL
Subjt:  RAQSPMAGARLTARLFGRASPAQILDVIPKLIVALTILQHNRTMKYNGVAPVHPSSSPELLSSNRKHLTSAIRKIVPLEMKCPNLVAQQRKL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACAAGAAGTAGTTGGGTCAACATCTTCCCATATTCGACCTTTTCTTCAGGAACTGATGAACTGCGACATGAAATCATTTCCTTCGCAAAAGATTACAAGCGACT
TAATGCCACAAATTCGGTTGTCTTTGAAGGATTTACAATTGCAAAATGGAGAGGAAGAGATGGAGAGACAGATAAATCGCAAAGAGAGCGCAATGGAGAGGAAGAGAGAC
CTTACCTGTTCTGCTGCGGTGCCCTGATGAAGGTGATCGATTTCAGAGCTTCCTTTCTTAGTTTTGTTATATTAATCGAGAGAGCGCAATCGCCAATGGCGGGCGCGCGC
TTAACCGCGCGATTGTTTGGGCGCGCCTCGCCAGCTCAAATACTCGATGTAATTCCAAAGTTGATCGTAGCATTGACAATTTTGCAACACAATAGAACAATGAAATACAA
TGGTGTAGCACCAGTTCATCCATCGTCATCGCCGGAATTACTATCCAGTAACCGCAAGCATCTTACTTCTGCAATACGAAAGATTGTGCCCCTGGAAATGAAATGCCCAA
ATTTGGTTGCGCAGCAGAGAAAACTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACACAAGAAGTAGTTGGGTCAACATCTTCCCATATTCGACCTTTTCTTCAGGAACTGATGAACTGCGACATGAAATCATTTCCTTCGCAAAAGATTACAAGCGACT
TAATGCCACAAATTCGGTTGTCTTTGAAGGATTTACAATTGCAAAATGGAGAGGAAGAGATGGAGAGACAGATAAATCGCAAAGAGAGCGCAATGGAGAGGAAGAGAGAC
CTTACCTGTTCTGCTGCGGTGCCCTGATGAAGGTGATCGATTTCAGAGCTTCCTTTCTTAGTTTTGTTATATTAATCGAGAGAGCGCAATCGCCAATGGCGGGCGCGCGC
TTAACCGCGCGATTGTTTGGGCGCGCCTCGCCAGCTCAAATACTCGATGTAATTCCAAAGTTGATCGTAGCATTGACAATTTTGCAACACAATAGAACAATGAAATACAA
TGGTGTAGCACCAGTTCATCCATCGTCATCGCCGGAATTACTATCCAGTAACCGCAAGCATCTTACTTCTGCAATACGAAAGATTGTGCCCCTGGAAATGAAATGCCCAA
ATTTGGTTGCGCAGCAGAGAAAACTGTAG
Protein sequenceShow/hide protein sequence
MDTRSSWVNIFPYSTFSSGTDELRHEIISFAKDYKRLNATNSVVFEGFTIAKWRGRDGETDKSQRERNGEEERPYLFCCGALMKVIDFRASFLSFVILIERAQSPMAGAR
LTARLFGRASPAQILDVIPKLIVALTILQHNRTMKYNGVAPVHPSSSPELLSSNRKHLTSAIRKIVPLEMKCPNLVAQQRKL