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Carg21552 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21552
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNudix hydrolase
Genome locationCarg_Chr18:10321233..10321979
RNA-Seq ExpressionCarg21552
SyntenyCarg21552
Gene Ontology termsGO:0006203 - dGTP catabolic process (biological process)
GO:0005829 - cytosol (cellular component)
GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity (molecular function)
InterPro domainsIPR000086 - NUDIX hydrolase domain
IPR015797 - NUDIX hydrolase-like domain superfamily
IPR020084 - NUDIX hydrolase, conserved site
IPR020476 - NUDIX hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574004.1 Geranyl diphosphate phosphohydrolase, partial [Cucurbita argyrosperma subsp. sororia]6.8e-8699.37Show/hide
Query:  MGSEVQQINGTKTKTLVVAPPASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTP
        MGSEVQQINGTKTKTLVVAPP SPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTP
Subjt:  MGSEVQQINGTKTKTLVVAPPASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTP

Query:  AHYVVVFVRAVLADPMQTPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPFT
        AHYVVVFVRAVLADPMQTPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPFT
Subjt:  AHYVVVFVRAVLADPMQTPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPFT

KAG7013060.1 Geranyl diphosphate phosphohydrolase, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-86100Show/hide
Query:  MGSEVQQINGTKTKTLVVAPPASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTP
        MGSEVQQINGTKTKTLVVAPPASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTP
Subjt:  MGSEVQQINGTKTKTLVVAPPASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTP

Query:  AHYVVVFVRAVLADPMQTPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPFT
        AHYVVVFVRAVLADPMQTPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPFT
Subjt:  AHYVVVFVRAVLADPMQTPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPFT

XP_022945655.1 geranyl diphosphate phosphohydrolase-like [Cucurbita moschata]1.5e-8598.73Show/hide
Query:  MGSEVQQINGTKTKTLVVAPPASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTP
        MGSEVQQINGTKTKTLVVAPP SPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLF+DQPTP
Subjt:  MGSEVQQINGTKTKTLVVAPPASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTP

Query:  AHYVVVFVRAVLADPMQTPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPFT
        AHYVVVFVRAVLADPMQTPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPFT
Subjt:  AHYVVVFVRAVLADPMQTPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPFT

XP_022968432.1 geranyl diphosphate phosphohydrolase-like [Cucurbita maxima]2.9e-8196.18Show/hide
Query:  MGSEVQQINGTKTKTLVVAPPASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTP
        M SEVQQINGTKTKTLVVAPP SPQVAVAICLLR KSVLMGRRLVSIGNSKYSLPSGHLEFGE FEECAAREMKEETGLDIEKVEFLKVTNNLF+DQPTP
Subjt:  MGSEVQQINGTKTKTLVVAPPASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTP

Query:  AHYVVVFVRAVLADPMQTPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPF
        AHYVVVFVRAVLA PMQTPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPF
Subjt:  AHYVVVFVRAVLADPMQTPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPF

XP_023541815.1 geranyl diphosphate phosphohydrolase-like [Cucurbita pepo subsp. pepo]1.6e-8296.82Show/hide
Query:  MGSEVQQINGTKTKTLVVAPPASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTP
        M SEVQQINGTKTKTLVVAPP SPQVAVAICLLR KSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLF+DQPTP
Subjt:  MGSEVQQINGTKTKTLVVAPPASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTP

Query:  AHYVVVFVRAVLADPMQTPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPF
        AHYVVVFVRAVLADPMQTPLNLEPDKCGGWDWYEWDSLP+PLFGPIKAMVMEGFNPF
Subjt:  AHYVVVFVRAVLADPMQTPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPF

TrEMBL top hitse value%identityAlignment
A0A0A0KR28 Nudix hydrolase domain-containing protein4.2e-6586.67Show/hide
Query:  SPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTPAHYVVVFVRAVLADPMQTPLNL
        SPQVAVAICLL+DK +LMGRRLVSIGNSKYSLPSGHLEFGENFEECA RE+KEETGLDIEK+EFLKVTNNLF+DQP PAHYVVVFVRAVL DP QTP+NL
Subjt:  SPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTPAHYVVVFVRAVLADPMQTPLNL

Query:  EPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPF
        EP+KC GWDWYEWD LP PLFGPIK MV +GFNPF
Subjt:  EPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPF

A0A1S3BFY2 nudix hydrolase 1-like1.5e-6787.86Show/hide
Query:  VAPPASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTPAHYVVVFVRAVLADPMQ
        VA P SPQVAVAICLLRDK +LMGRRLVSIGNSKYSLPSGHLEFGENFEECA RE+KEETGLDI K+EFLKVTNNLF+DQP PAHYVVVFVRAVL DP Q
Subjt:  VAPPASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTPAHYVVVFVRAVLADPMQ

Query:  TPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPF
        TPLNLEP+KC GWDWYEWD+LPQPLFGPIK MVM+GFNPF
Subjt:  TPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPF

A0A5D3CCL5 Nudix hydrolase 1-like1.5e-6787.86Show/hide
Query:  VAPPASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTPAHYVVVFVRAVLADPMQ
        VA P SPQVAVAICLLRDK +LMGRRLVSIGNSKYSLPSGHLEFGENFEECA RE+KEETGLDI K+EFLKVTNNLF+DQP PAHYVVVFVRAVL DP Q
Subjt:  VAPPASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTPAHYVVVFVRAVLADPMQ

Query:  TPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPF
        TPLNLEP+KC GWDWYEWD+LPQPLFGPIK MVM+GFNPF
Subjt:  TPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPF

A0A6J1G1K2 geranyl diphosphate phosphohydrolase-like7.3e-8698.73Show/hide
Query:  MGSEVQQINGTKTKTLVVAPPASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTP
        MGSEVQQINGTKTKTLVVAPP SPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLF+DQPTP
Subjt:  MGSEVQQINGTKTKTLVVAPPASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTP

Query:  AHYVVVFVRAVLADPMQTPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPFT
        AHYVVVFVRAVLADPMQTPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPFT
Subjt:  AHYVVVFVRAVLADPMQTPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPFT

A0A6J1HTH5 geranyl diphosphate phosphohydrolase-like1.4e-8196.18Show/hide
Query:  MGSEVQQINGTKTKTLVVAPPASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTP
        M SEVQQINGTKTKTLVVAPP SPQVAVAICLLR KSVLMGRRLVSIGNSKYSLPSGHLEFGE FEECAAREMKEETGLDIEKVEFLKVTNNLF+DQPTP
Subjt:  MGSEVQQINGTKTKTLVVAPPASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTP

Query:  AHYVVVFVRAVLADPMQTPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPF
        AHYVVVFVRAVLA PMQTPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPF
Subjt:  AHYVVVFVRAVLADPMQTPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPF

SwissProt top hitse value%identityAlignment
C5BHE7 NAD-capped RNA hydrolase NudC1.7e-0730.3Show/hide
Query:  PQVA--VAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTPAHYVVVFVRAVLADPMQTPLN
        PQ+A  + + + RD  +L+ R      N  Y++ +G +E GE  E+ AARE+ EE+ L ++ + ++         QP P  + ++   A LAD     L 
Subjt:  PQVA--VAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTPAHYVVVFVRAVLADPMQTPLN

Query:  LEPDKCGGWDWYEWDSLPQ-PLFGPIKAMVME
         +P +    DWY +D LPQ P  G +   ++E
Subjt:  LEPDKCGGWDWYEWDSLPQ-PLFGPIKAMVME

M4I1C6 Geranyl diphosphate phosphohydrolase5.6e-5164.83Show/hide
Query:  KTLVVAPPA-SPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTPAHYVVVFVRAVL
        +T+VVA  A S +VAV +CLLR ++VL+GRR  S+G+S +SLPSGHLEFGE+FEECAARE+KEET LDI K+E L VTNNLF+D+  P+ YV VF+RAVL
Subjt:  KTLVVAPPA-SPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTPAHYVVVFVRAVL

Query:  ADPMQTPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPF
        ADP Q P N+EP+ C GW WYEWD+LP+PLF P+  +V +GFNPF
Subjt:  ADPMQTPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPF

Q8BG93 Nucleotide triphosphate diphosphatase NUDT158.8e-2037.5Show/hide
Query:  PPASPQVAVAICLL---RDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTPAHYVVVFVRA-VLADP
        P   P V V + +L     + VL+G+R  S G   + LP GHLEFGE +EECA RE  EE GL ++ V F  V N+ FV++    HYV + ++  V    
Subjt:  PPASPQVAVAICLL---RDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTPAHYVVVFVRA-VLADP

Query:  MQTPLNLEPDKCGGWDWYEWDSLP--QPLFGPIKAMVMEGFNPF
           P N+EP+K   W+W  W+  P    LF  ++ +  +G++PF
Subjt:  MQTPLNLEPDKCGGWDWYEWDSLP--QPLFGPIKAMVMEGFNPF

Q9CA40 Nudix hydrolase 19.0e-4962.04Show/hide
Query:  ASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTPAHYVVVFVRAVLADPMQTPLN
        A P+VAV + +L   S+L+GRR  SIGNS ++LP GHLEFGE+FEECAARE+ EETGL IEK++ L VTNN+F + PTP+HYV V +RAVL DP Q P N
Subjt:  ASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTPAHYVVVFVRAVLADPMQTPLN

Query:  LEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPFT
        +EP+KC GWDWY+W++LP+PLF P++ +   GFNPFT
Subjt:  LEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPFT

Q9NV35 Nucleotide triphosphate diphosphatase NUDT152.6e-1936.88Show/hide
Query:  PPASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTPAHYVVVFVRA-VLADPMQT
        P     V V  C    + VL+G+R  S+G   + LP GHLEFGE +EECA RE  EE  L ++ V F  V N+ F+++    HYV + ++  V       
Subjt:  PPASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTPAHYVVVFVRA-VLADPMQT

Query:  PLNLEPDKCGGWDWYEWDSLP--QPLFGPIKAMVMEGFNPF
        P N+EP+K   W+W  W+ LP    LF  ++ +  +G++PF
Subjt:  PLNLEPDKCGGWDWYEWDSLP--QPLFGPIKAMVMEGFNPF

Arabidopsis top hitse value%identityAlignment
AT1G68760.1 nudix hydrolase 16.4e-5062.04Show/hide
Query:  ASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTPAHYVVVFVRAVLADPMQTPLN
        A P+VAV + +L   S+L+GRR  SIGNS ++LP GHLEFGE+FEECAARE+ EETGL IEK++ L VTNN+F + PTP+HYV V +RAVL DP Q P N
Subjt:  ASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTPAHYVVVFVRAVLADPMQTPLN

Query:  LEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPFT
        +EP+KC GWDWY+W++LP+PLF P++ +   GFNPFT
Subjt:  LEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPFT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTCTGAGGTCCAACAGATTAACGGCACAAAAACGAAGACATTGGTGGTGGCGCCTCCGGCATCGCCGCAAGTAGCAGTGGCGATTTGCTTGTTGAGAGATAAATC
GGTGCTAATGGGGCGTCGACTTGTATCGATTGGCAACTCTAAATATTCTCTCCCAAGTGGCCATCTTGAATTTGGTGAGAATTTTGAAGAATGTGCTGCAAGAGAGATGA
AGGAAGAGACGGGGCTGGATATTGAGAAGGTTGAGTTTTTGAAAGTGACCAATAATTTGTTTGTGGACCAACCAACGCCGGCTCACTATGTGGTGGTGTTCGTGCGGGCG
GTGTTGGCTGATCCCATGCAAACGCCGCTCAATCTTGAGCCTGACAAATGTGGTGGCTGGGATTGGTATGAATGGGATAGTCTGCCCCAACCACTCTTTGGTCCCATCAA
AGCAATGGTTATGGAGGGCTTCAATCCTTTCACGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTCTGAGGTCCAACAGATTAACGGCACAAAAACGAAGACATTGGTGGTGGCGCCTCCGGCATCGCCGCAAGTAGCAGTGGCGATTTGCTTGTTGAGAGATAAATC
GGTGCTAATGGGGCGTCGACTTGTATCGATTGGCAACTCTAAATATTCTCTCCCAAGTGGCCATCTTGAATTTGGTGAGAATTTTGAAGAATGTGCTGCAAGAGAGATGA
AGGAAGAGACGGGGCTGGATATTGAGAAGGTTGAGTTTTTGAAAGTGACCAATAATTTGTTTGTGGACCAACCAACGCCGGCTCACTATGTGGTGGTGTTCGTGCGGGCG
GTGTTGGCTGATCCCATGCAAACGCCGCTCAATCTTGAGCCTGACAAATGTGGTGGCTGGGATTGGTATGAATGGGATAGTCTGCCCCAACCACTCTTTGGTCCCATCAA
AGCAATGGTTATGGAGGGCTTCAATCCTTTCACGTAA
Protein sequenceShow/hide protein sequence
MGSEVQQINGTKTKTLVVAPPASPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKVEFLKVTNNLFVDQPTPAHYVVVFVRA
VLADPMQTPLNLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPFT