; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg21568 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21568
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionATP-dependent Clp protease adapter protein CLPS1
Genome locationCarg_Chr18:10187804..10190991
RNA-Seq ExpressionCarg21568
SyntenyCarg21568
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0030163 - protein catabolic process (biological process)
GO:0005840 - ribosome (cellular component)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR003769 - Adaptor protein ClpS, core
IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
IPR022935 - ATP-dependent Clp protease adaptor protein ClpS


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013044.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]2.0e-85100Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQVL
        MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQVL
Subjt:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC
        MKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC

XP_022945945.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like [Cucurbita moschata]4.9e-8499.38Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGR-GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQV
        MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGR GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQV
Subjt:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGR-GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQV

Query:  LMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC
        LMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC
Subjt:  LMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC

XP_022968529.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like [Cucurbita maxima]1.2e-8297.5Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGR-GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQV
        MEIAICGKLALSPNHVFNPKPG+RSSVCKGLCSTLCASVVKSATTAGR GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQV
Subjt:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGR-GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQV

Query:  LMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC
        LMKVIPGMTLDNAVNIMQEAHCNG+SLVIICAQADAEEHC QLRGNGLLSSIEPASGGCC
Subjt:  LMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC

XP_023542987.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like [Cucurbita pepo subsp. pepo]2.4e-8398.12Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGR-GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQV
        MEIAICGKLALSPNHVFNPKPG+RSSVCKGLCSTLCASVVKSATTAGR GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQV
Subjt:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGR-GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQV

Query:  LMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC
        LMKVIPGMTLDNAVNIMQEAHCNG+SLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC
Subjt:  LMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC

XP_038891525.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X2 [Benincasa hispida]1.6e-7993.71Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQVL
        MEIAICGKLALSPNHVFNPKPG+RSSVCKGLCS   ASVVKSA TAGRGGGLLERPVIEKATPGRESEFDLR+SRK TPPYRVILHNDDFN+REYVVQVL
Subjt:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC
        MKVIPGMTLDNAVNIMQEAHCNG+SLVIICAQADAEEHC QLRGNGLLSSIEPASGGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC

TrEMBL top hitse value%identityAlignment
A0A1S3BG61 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X12.1e-7791.19Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQVL
        MEIAICGKLA+SPNHVFNPKPG+RSS+CKGLC    ASVVKSA TAGRGGGLLERPVIEKATPGRESEFD+RRSRK TPPYRVILHNDDFN+REYVVQVL
Subjt:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC
        MKVIPGMTLDNAVNIMQEAH NG+SLVIICAQADAEEHC QLRGNGLLSSIEPASGGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC

A0A5A7STJ9 ATP-dependent Clp protease adapter protein CLPS12.1e-7791.19Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQVL
        MEIAICGKLA+SPNHVFNPKPG+RSS+CKGLC    ASVVKSA TAGRGGGLLERPVIEKATPGRESEFD+RRSRK TPPYRVILHNDDFN+REYVVQVL
Subjt:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC
        MKVIPGMTLDNAVNIMQEAH NG+SLVIICAQADAEEHC QLRGNGLLSSIEPASGGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC

A0A6J1DBL1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic5.7e-7890.57Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQVL
        MEIAICGKLALSPNHVFNP+PG+++ VC+GLCS+L A++VKSATTAG+GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFN+REYVVQVL
Subjt:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC
        MKVIPGMTLDNAVNIMQEAH NG+SLVIICAQADAEEHC QLRGNGLLSSIEPASGGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC

A0A6J1G2F4 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like2.4e-8499.38Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGR-GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQV
        MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGR GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQV
Subjt:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGR-GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQV

Query:  LMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC
        LMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC
Subjt:  LMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC

A0A6J1HZX0 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like5.8e-8397.5Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGR-GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQV
        MEIAICGKLALSPNHVFNPKPG+RSSVCKGLCSTLCASVVKSATTAGR GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQV
Subjt:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGR-GGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQV

Query:  LMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC
        LMKVIPGMTLDNAVNIMQEAHCNG+SLVIICAQADAEEHC QLRGNGLLSSIEPASGGCC
Subjt:  LMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC

SwissProt top hitse value%identityAlignment
A0A2K3CNL6 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic1.2e-2142.31Show/hide
Query:  KGLCSTLCASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQVLMKVIPGMTLDNAVNIMQEAHCNGMSLVI
        +G   T      ++       GG+++ P     T  ++    + RS+K  P Y+V+LHND++N+REYVV+VL+KV+  +T+D+AV  MQEAH  G++LV+
Subjt:  KGLCSTLCASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQVLMKVIPGMTLDNAVNIMQEAHCNGMSLVI

Query:  ICAQADAEEHCTQLRGNGLLSSIEPASGGC
         C Q +AE +C  LR NGL S+IEP  GGC
Subjt:  ICAQADAEEHCTQLRGNGLLSSIEPASGGC

Q31QE7 ATP-dependent Clp protease adapter protein ClpS4.4e-1959.49Show/hide
Query:  RKTTPPYRVILHNDDFNRREYVVQVLMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEP
        RK  P YRV+LHNDDFN  EYVV VLM+ +P +T   AV+IM EAH NG  LVI C    AE +C QL+ +GL SSIEP
Subjt:  RKTTPPYRVILHNDDFNRREYVVQVLMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEP

Q3AUR5 ATP-dependent Clp protease adapter protein ClpS4.2e-1443.62Show/hide
Query:  TPGRESEFDL--RRSRKTTPPYRVILHNDDFNRREYVVQVLMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEP
        +PG  +  D    R RK +P Y+V+LHND  N  EYV+  L +V+P ++  +A+ +M EAH  G+ LVI+C    AE +C  L+  GL SSIEP
Subjt:  TPGRESEFDL--RRSRKTTPPYRVILHNDDFNRREYVVQVLMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEP

Q5N3U1 ATP-dependent Clp protease adapter protein ClpS2.0e-1657.53Show/hide
Query:  RKTTPPYRVILHNDDFNRREYVVQVLMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGL
        RK  P YRV+LHNDDFN  EYVV VLM+ +P +T   AV+IM EAH NG  LVI C    AE +C QL+ +GL
Subjt:  RKTTPPYRVILHNDDFNRREYVVQVLMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGL

Q9SX29 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic1.5e-5968.55Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTA-GRGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQV
        ME AICG+LAL+P+ +FN K G++  V KG C      +  S + A G+GGG+L++P+IEK TPGRESEFDLR+S+K  PPYRVILHND+FN+REYVVQV
Subjt:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTA-GRGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQV

Query:  LMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGC
        LMKVIPGMT+DNAVNIMQEAH NG+++VI+CAQADAE+HC QLRGNGLLSS+EP  GGC
Subjt:  LMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGC

Arabidopsis top hitse value%identityAlignment
AT1G68660.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein1.1e-6068.55Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTA-GRGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQV
        ME AICG+LAL+P+ +FN K G++  V KG C      +  S + A G+GGG+L++P+IEK TPGRESEFDLR+S+K  PPYRVILHND+FN+REYVVQV
Subjt:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTA-GRGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQV

Query:  LMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGC
        LMKVIPGMT+DNAVNIMQEAH NG+++VI+CAQADAE+HC QLRGNGLLSS+EP  GGC
Subjt:  LMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGC

AT1G68660.2 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein1.2e-4053.46Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTA-GRGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQV
        ME AICG+LAL+P+ +FN K G++  V KG C      +  S + A G+GGG+L++P+IEK TPGRESEFDLR+S+K  PPYRVILHND+FN+REYVVQV
Subjt:  MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTA-GRGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQV

Query:  LMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGC
        LMK                              ADAE+HC QLRGNGLLSS+EP  GGC
Subjt:  LMKVIPGMTLDNAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTGCGATTTGCGGCAAATTAGCTCTCTCACCCAACCATGTCTTCAACCCCAAACCAGGGGAGAGAAGTTCTGTCTGTAAAGGGCTATGCTCAACCCTTTGTGC
ATCCGTTGTTAAATCAGCAACAACAGCAGGAAGAGGAGGAGGGCTGTTGGAGAGGCCTGTTATTGAGAAAGCCACTCCTGGAAGAGAATCTGAGTTTGATTTGAGGAGAT
CAAGGAAAACGACGCCACCATACCGTGTGATTCTGCATAACGACGACTTCAACAGACGAGAATACGTGGTTCAAGTCCTGATGAAAGTGATTCCTGGAATGACACTGGAC
AATGCTGTTAACATCATGCAAGAAGCTCACTGCAATGGCATGTCACTGGTGATCATTTGTGCGCAGGCTGATGCTGAAGAACACTGCACGCAGCTCAGAGGCAATGGGCT
GTTGAGTTCAATCGAACCAGCGAGTGGCGGGTGCTGCTGA
mRNA sequenceShow/hide mRNA sequence
TCCCTCGGCTTTTCGCAGTTCCTCCTCTGAAAACGAATCAGTCCACTTCCATTTTTCCTATTTTCTCCTTTGAATTTTGTAATCTTTTGAAGAAATTAGCAGGATTGTTC
CTCATCGGAACCGATTTCTGCTTCAGATTGACAAGAAAAGAAGCCATGGAGATTGCGATTTGCGGCAAATTAGCTCTCTCACCCAACCATGTCTTCAACCCCAAACCAGG
GGAGAGAAGTTCTGTCTGTAAAGGGCTATGCTCAACCCTTTGTGCATCCGTTGTTAAATCAGCAACAACAGCAGGAAGAGGAGGAGGGCTGTTGGAGAGGCCTGTTATTG
AGAAAGCCACTCCTGGAAGAGAATCTGAGTTTGATTTGAGGAGATCAAGGAAAACGACGCCACCATACCGTGTGATTCTGCATAACGACGACTTCAACAGACGAGAATAC
GTGGTTCAAGTCCTGATGAAAGTGATTCCTGGAATGACACTGGACAATGCTGTTAACATCATGCAAGAAGCTCACTGCAATGGCATGTCACTGGTGATCATTTGTGCGCA
GGCTGATGCTGAAGAACACTGCACGCAGCTCAGAGGCAATGGGCTGTTGAGTTCAATCGAACCAGCGAGTGGCGGGTGCTGCTGAACTTCTTCATCCACTGGGTCATACG
TTTATGGTGTATGTAAGTTAGTCTTCATAACCAAAGGCATGGAGATAGGTAGGAAACTGGTATAATATAAGTATTGCACAACTCTTACTATATTTTCTTTGTTTTTGGAG
T
Protein sequenceShow/hide protein sequence
MEIAICGKLALSPNHVFNPKPGERSSVCKGLCSTLCASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKTTPPYRVILHNDDFNRREYVVQVLMKVIPGMTLD
NAVNIMQEAHCNGMSLVIICAQADAEEHCTQLRGNGLLSSIEPASGGCC