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Carg21579 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21579
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHeavy metal-associated domain containing protein
Genome locationCarg_Chr18:10137972..10139463
RNA-Seq ExpressionCarg21579
SyntenyCarg21579
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR036163 - Heavy metal-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573976.1 hypothetical protein SDJN03_27863, partial [Cucurbita argyrosperma subsp. sororia]3.8e-4599.04Show/hide
Query:  MAERPNKTAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIPTSRVSTIKRLLG
        MAERPNKTAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIPTSR STIKRLLG
Subjt:  MAERPNKTAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIPTSRVSTIKRLLG

Query:  SSFR
        SSFR
Subjt:  SSFR

KAG7013033.1 hypothetical protein SDJN02_25789 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-45100Show/hide
Query:  MAERPNKTAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIPTSRVSTIKRLLG
        MAERPNKTAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIPTSRVSTIKRLLG
Subjt:  MAERPNKTAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIPTSRVSTIKRLLG

Query:  SSFR
        SSFR
Subjt:  SSFR

XP_022945539.1 uncharacterized protein LOC111449743 isoform X3 [Cucurbita moschata]3.0e-4297.09Show/hide
Query:  MAERPNKTAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIPTSRVSTIKRLLG
        MAERPNKT AAAGIGVRKLKIFPHASSLAS+ESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQI TSRVSTIKRLLG
Subjt:  MAERPNKTAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIPTSRVSTIKRLLG

Query:  SSF
        SSF
Subjt:  SSF

XP_022968296.1 uncharacterized protein LOC111467567 isoform X3 [Cucurbita maxima]3.0e-4294.29Show/hide
Query:  MAERPNK-TAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIPTSRVSTIKRLL
        MAERPNK  AAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVF ADIGCAECQKKLANIL+KMNDTESVVVNLLDKKVILTRKLQIP+SRVST+KRLL
Subjt:  MAERPNK-TAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIPTSRVSTIKRLL

Query:  GSSFR
        GSSFR
Subjt:  GSSFR

XP_023542320.1 uncharacterized protein LOC111802252 [Cucurbita pepo subsp. pepo]1.2e-4398.1Show/hide
Query:  MAERPNK-TAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIPTSRVSTIKRLL
        MAERPNK  AAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIPTSRVSTIKRLL
Subjt:  MAERPNK-TAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIPTSRVSTIKRLL

Query:  GSSFR
        GSSFR
Subjt:  GSSFR

TrEMBL top hitse value%identityAlignment
A0A6J1DB71 uncharacterized protein LOC1110187073.4e-3175.45Show/hide
Query:  MAERPNKTAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIP------TSRVST
        MAER  K AA   IGVRK +IFPHASSLASIESLSLPLVQEIV  ADI C ECQ KLANIL+K+NDTESVVVNLL+KKVILTR+LQ+P      +S+V+T
Subjt:  MAERPNKTAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIP------TSRVST

Query:  IKRLLGSSFR
        IKRLLGSSFR
Subjt:  IKRLLGSSFR

A0A6J1G168 uncharacterized protein LOC111449743 isoform X23.0e-3575.38Show/hide
Query:  MAERPNKTAAAAGIGVRKLKIFPHASSLASIESLSLPL---------------------------VQEIVFAADIGCAECQKKLANILAKMNDTESVVVN
        MAERPNKT AAAGIGVRKLKIFPHASSLAS+ESLSLPL                           VQEIVFAADIGCAECQKKLANILAKMN  ESVVVN
Subjt:  MAERPNKTAAAAGIGVRKLKIFPHASSLASIESLSLPL---------------------------VQEIVFAADIGCAECQKKLANILAKMNDTESVVVN

Query:  LLDKKVILTRKLQIPTSRVSTIKRLLGSSF
        LLDKKVILTRKLQI TSRVSTIKRLLGSSF
Subjt:  LLDKKVILTRKLQIPTSRVSTIKRLLGSSF

A0A6J1G176 uncharacterized protein LOC111449743 isoform X13.7e-3876.92Show/hide
Query:  MAERPNKTAAAAGIGVRKLKIFPHASSLASIESLSLPL---------------------------VQEIVFAADIGCAECQKKLANILAKMNDTESVVVN
        MAERPNKT AAAGIGVRKLKIFPHASSLAS+ESLSLPL                           VQEIVFAADIGCAECQKKLANILAKMNDTESVVVN
Subjt:  MAERPNKTAAAAGIGVRKLKIFPHASSLASIESLSLPL---------------------------VQEIVFAADIGCAECQKKLANILAKMNDTESVVVN

Query:  LLDKKVILTRKLQIPTSRVSTIKRLLGSSF
        LLDKKVILTRKLQI TSRVSTIKRLLGSSF
Subjt:  LLDKKVILTRKLQIPTSRVSTIKRLLGSSF

A0A6J1G188 uncharacterized protein LOC111449743 isoform X31.5e-4297.09Show/hide
Query:  MAERPNKTAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIPTSRVSTIKRLLG
        MAERPNKT AAAGIGVRKLKIFPHASSLAS+ESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQI TSRVSTIKRLLG
Subjt:  MAERPNKTAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIPTSRVSTIKRLLG

Query:  SSF
        SSF
Subjt:  SSF

A0A6J1HUG9 uncharacterized protein LOC111467567 isoform X31.5e-4294.29Show/hide
Query:  MAERPNK-TAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIPTSRVSTIKRLL
        MAERPNK  AAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVF ADIGCAECQKKLANIL+KMNDTESVVVNLLDKKVILTRKLQIP+SRVST+KRLL
Subjt:  MAERPNK-TAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIPTSRVSTIKRLL

Query:  GSSFR
        GSSFR
Subjt:  GSSFR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68585.1 unknown protein9.2e-1347.06Show/hide
Query:  SSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILT------RKL-----QIPTSRVSTIKRLL
        +SLAS+ SLS+PL+QEIV +ADI C++CQ+K+A+I+A+M +T S++V++L+KKV LT      R++     +    ++STIKRL+
Subjt:  SSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILT------RKL-----QIPTSRVSTIKRLL

AT2G35730.1 Heavy metal transport/detoxification superfamily protein1.2e-0442.11Show/hide
Query:  SLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTR
        +L   E LSLP  Q I   AD+GC  CQ +++ I++KM   E  VV+ L KK+++ R
Subjt:  SLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGCGGCCCAACAAGACGGCGGCGGCGGCGGGAATTGGAGTTCGGAAGCTTAAGATTTTCCCTCATGCTTCTAGCCTTGCCTCCATCGAATCCTTATCTCTGCC
TCTCGTTCAGGAAATCGTGTTCGCGGCGGACATTGGCTGCGCTGAATGCCAGAAGAAATTAGCGAATATTCTTGCCAAAATGAACGATACAGAGTCTGTGGTGGTGAATT
TGCTGGACAAAAAAGTGATACTGACTCGAAAATTGCAGATTCCAACAAGTAGAGTTTCAACGATCAAGAGATTGCTTGGTTCTTCTTTCCGATAA
mRNA sequenceShow/hide mRNA sequence
CTTCTCCTTTATCGCAACCACTTAAACAAAGCTTTTCACAGTCCCATCATCCATGGCTCATAAAATCCTCCCCTGTTTCGCCGGCAGCGTTTAACCGGACCATGGCGGAG
CGGCCCAACAAGACGGCGGCGGCGGCGGGAATTGGAGTTCGGAAGCTTAAGATTTTCCCTCATGCTTCTAGCCTTGCCTCCATCGAATCCTTATCTCTGCCTCTCGTTCA
GGAAATCGTGTTCGCGGCGGACATTGGCTGCGCTGAATGCCAGAAGAAATTAGCGAATATTCTTGCCAAAATGAACGATACAGAGTCTGTGGTGGTGAATTTGCTGGACA
AAAAAGTGATACTGACTCGAAAATTGCAGATTCCAACAAGTAGAGTTTCAACGATCAAGAGATTGCTTGGTTCTTCTTTCCGATAATGGTGAAGATATTGTGATATATAA
CAGAATATTTTCGGTCACATTCGTAGATAAATAAAGGATCATACTCTTTGTTGTTTAGTCTCGGCTATTATTGTTTTTATGAGAATATTAAATATTGGGTTCTGAATGCA
ACAAAATCATCGTACATTAAAAGATGATTTTGATCGGAGTTGAAAACATTTTAAAGGAGTGAGCCTTGCTGGAAAACATGGCTCTGGCTCAATGTAATTACGGGTTTAAT
CGATGGAGGCTCTGTTTGTGTCGTTTTCGTTATAATTCTTTTGACATTTTTGTTGTCTATTATTGGTGTATTGGTATGTGAGATTCCATATCGGTTTGAGAGGTAGTATG
TACCTC
Protein sequenceShow/hide protein sequence
MAERPNKTAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIPTSRVSTIKRLLGSSFR