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Carg21584 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21584
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein NIM1-INTERACTING 2
Genome locationCarg_Chr18:10112241..10112711
RNA-Seq ExpressionCarg21584
SyntenyCarg21584
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
InterPro domainsIPR034577 - Protein NIM1-INTERACTING 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573971.1 hypothetical protein SDJN03_27858, partial [Cucurbita argyrosperma subsp. sororia]3.1e-75100Show/hide
Query:  MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE
        MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE
Subjt:  MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE

Query:  IRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
        IRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
Subjt:  IRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK

XP_022944860.1 uncharacterized protein LOC111449260 [Cucurbita moschata]6.9e-7599.36Show/hide
Query:  MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE
        MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNER+MTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE
Subjt:  MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE

Query:  IRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
        IRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
Subjt:  IRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK

XP_022968293.1 uncharacterized protein LOC111467566 [Cucurbita maxima]1.5e-5682.8Show/hide
Query:  MPFELFPSSRTDRGKRKRERGEHADYDAAAA-AGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV
        MPFELFPSSR DRGKRKRERGEHADY+AAAA AGNQK+TVA+RG EREMTSDEEVEEFF ILKRLHAATKYIEKIDGARS LMGKRAKTAKASEKEGDGV
Subjt:  MPFELFPSSRTDRGKRKRERGEHADYDAAAA-AGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV

Query:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
        EIRTKRIPEQKLDRNLDLDLDLNLEPAS                   DDSAADSRRK
Subjt:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK

XP_023542001.1 uncharacterized protein LOC111801981 [Cucurbita pepo subsp. pepo]2.3e-7096.15Show/hide
Query:  MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE
        MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE
Subjt:  MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE

Query:  IRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
        IRTKRIP+QKLDRN  LDLDLNLEP  VESDGKERRSRSHNLKSLT DSAADSRRK
Subjt:  IRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK

XP_038892789.1 protein NIM1-INTERACTING 2 [Benincasa hispida]6.1e-3966.24Show/hide
Query:  MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV
        MPFELFP+SR TDRGKRKRE          A  G+Q++ VA+RG E E  +DEEVEEFF+ILKRLHAATKYIEKIDGA  LLMGKR+K  K+SE+E D V
Subjt:  MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV

Query:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
        EIR ++IP+ KLDRN  LDLDLNLEPA VESD  ++ SRS NLK+   DSAADS RK
Subjt:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK

TrEMBL top hitse value%identityAlignment
A0A0A0KT67 Uncharacterized protein3.1e-3664.97Show/hide
Query:  MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV
        MPFELFP+SR T+RGKRK  RG+       A  GNQK+  AE G E E  +DEEVEEFF+ILKRLHAATKYIEKIDGA  LLMGKR K  K++E+EGD V
Subjt:  MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV

Query:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
         I+ +RIPEQKLDRN  LDLDLNLEP  VES+GK R  +  N K    DSAADS RK
Subjt:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK

A0A1S3BFE7 protein NIM1-INTERACTING 26.2e-3766.24Show/hide
Query:  MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV
        MPFELFP SR TDRGKRK  RG+       A AGNQK+ V + G E E  +DEEVEEFF+ILKRLHAATKYIEKIDGA  LLMGKR+K  K++E+E D V
Subjt:  MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV

Query:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
         IR +RIPEQKLDRN  LDLDLNLEP  VES+GK R+S+  NLK    DSAA S RK
Subjt:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK

A0A5A7SZN6 Protein NIM1-INTERACTING 26.2e-3766.24Show/hide
Query:  MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV
        MPFELFP SR TDRGKRK  RG+       A AGNQK+ V + G E E  +DEEVEEFF+ILKRLHAATKYIEKIDGA  LLMGKR+K  K++E+E D V
Subjt:  MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV

Query:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
         IR +RIPEQKLDRN  LDLDLNLEP  VES+GK R+S+  NLK    DSAA S RK
Subjt:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK

A0A6J1FZ89 uncharacterized protein LOC1114492603.4e-7599.36Show/hide
Query:  MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE
        MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNER+MTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE
Subjt:  MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE

Query:  IRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
        IRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
Subjt:  IRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK

A0A6J1HXL3 uncharacterized protein LOC1114675667.0e-5782.8Show/hide
Query:  MPFELFPSSRTDRGKRKRERGEHADYDAAAA-AGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV
        MPFELFPSSR DRGKRKRERGEHADY+AAAA AGNQK+TVA+RG EREMTSDEEVEEFF ILKRLHAATKYIEKIDGARS LMGKRAKTAKASEKEGDGV
Subjt:  MPFELFPSSRTDRGKRKRERGEHADYDAAAA-AGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV

Query:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
        EIRTKRIPEQKLDRNLDLDLDLNLEPAS                   DDSAADSRRK
Subjt:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTTTGAGTTGTTTCCATCGAGTCGTACGGATAGAGGGAAAAGAAAGCGGGAGCGAGGAGAACACGCCGATTACGATGCCGCCGCCGCTGCCGGGAACCAGAAGGA
GACGGTGGCGGAGAGAGGAAATGAGAGGGAGATGACGTCGGATGAAGAGGTGGAGGAGTTCTTCGCCATTTTGAAGCGATTACACGCGGCGACGAAATACATAGAGAAGA
TCGATGGTGCGAGAAGCTTGTTGATGGGGAAAAGAGCGAAGACGGCGAAGGCGAGCGAGAAAGAAGGCGATGGAGTTGAAATTAGAACAAAGAGAATTCCAGAGCAGAAA
TTGGACAGAAATTTGGATTTGGATCTGGATCTGAACTTAGAACCTGCTTCCGTTGAATCGGACGGCAAGGAGAGGAGAAGCCGGAGCCACAATCTGAAGTCATTAACCGA
CGATTCGGCTGCCGATTCTCGTCGGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGTTTGAGTTGTTTCCATCGAGTCGTACGGATAGAGGGAAAAGAAAGCGGGAGCGAGGAGAACACGCCGATTACGATGCCGCCGCCGCTGCCGGGAACCAGAAGGA
GACGGTGGCGGAGAGAGGAAATGAGAGGGAGATGACGTCGGATGAAGAGGTGGAGGAGTTCTTCGCCATTTTGAAGCGATTACACGCGGCGACGAAATACATAGAGAAGA
TCGATGGTGCGAGAAGCTTGTTGATGGGGAAAAGAGCGAAGACGGCGAAGGCGAGCGAGAAAGAAGGCGATGGAGTTGAAATTAGAACAAAGAGAATTCCAGAGCAGAAA
TTGGACAGAAATTTGGATTTGGATCTGGATCTGAACTTAGAACCTGCTTCCGTTGAATCGGACGGCAAGGAGAGGAGAAGCCGGAGCCACAATCTGAAGTCATTAACCGA
CGATTCGGCTGCCGATTCTCGTCGGAAGTAG
Protein sequenceShow/hide protein sequence
MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVEIRTKRIPEQK
LDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK