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Carg21671 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21671
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMini zinc finger
Genome locationCarg_Chr01:4433902..4434198
RNA-Seq ExpressionCarg21671
SyntenyCarg21671
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006456 - ZF-HD homeobox protein, Cys/His-rich dimerisation domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036083.1 mini zinc finger protein 1 [Cucumis melo var. makuwa]1.2e-3577.88Show/hide
Query:  MMKKRQVIVKRTDGSSNRNSSSST--------SSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCE
        MMKKRQV+VKR+      +SSSST        SSS VRS+VRYGECQKNHAANIGGYAVDGC EFLA GEEGSNGALTCAACGCHRNFHRREVE+EVVCE
Subjt:  MMKKRQVIVKRTDGSSNRNSSSST--------SSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCE

Query:  YFPP
        Y PP
Subjt:  YFPP

XP_008442199.1 PREDICTED: mini zinc finger protein 1 [Cucumis melo]2.0e-3575.96Show/hide
Query:  MMKKRQVIVKR--------TDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCE
        MMKKRQV+VKR        +  S+N N+ + +SSS VRS+VRYGECQKNHAANIGGYAVDGC EFLA GEEGSNGALTCAACGCHRNFHRREVE+EVVCE
Subjt:  MMKKRQVIVKR--------TDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCE

Query:  YFPP
        Y PP
Subjt:  YFPP

XP_022137501.1 mini zinc finger protein 2 [Momordica charantia]1.4e-3687.23Show/hide
Query:  MMKKRQVIVKRTDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYF
        MMKKRQV+VKR++GSSNRN SSSTSSS VRS+VRYGECQKNHAANIGGYAVDGC EFLA GEEGSNGALTCAACGCHRNFHRREVE+EVV   F
Subjt:  MMKKRQVIVKRTDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYF

XP_022949221.1 mini zinc finger protein 1 [Cucurbita moschata]5.9e-48100Show/hide
Query:  MMKKRQVIVKRTDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPPNA
        MMKKRQVIVKRTDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPPNA
Subjt:  MMKKRQVIVKRTDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPPNA

XP_038688169.1 mini zinc finger protein 1-like [Tripterygium wilfordii]2.3e-3678Show/hide
Query:  MMKKRQVIVK-RTDGSSNRNS-SSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPPNA
        MMKKRQV+VK R+DG++NR S ++ST+SS+V + +RYGECQKNHAAN+GGYAVDGC EF+A+GEEG+NGALTCAACGCHRNFHRREVETEVVCEY PPN+
Subjt:  MMKKRQVIVK-RTDGSSNRNS-SSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPPNA

TrEMBL top hitse value%identityAlignment
A0A5A7SZK7 Mini zinc finger protein 15.6e-3677.88Show/hide
Query:  MMKKRQVIVKRTDGSSNRNSSSST--------SSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCE
        MMKKRQV+VKR+      +SSSST        SSS VRS+VRYGECQKNHAANIGGYAVDGC EFLA GEEGSNGALTCAACGCHRNFHRREVE+EVVCE
Subjt:  MMKKRQVIVKRTDGSSNRNSSSST--------SSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCE

Query:  YFPP
        Y PP
Subjt:  YFPP

A0A5D3BJJ4 Mini zinc finger protein 19.6e-3675.96Show/hide
Query:  MMKKRQVIVKR--------TDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCE
        MMKKRQV+VKR        +  S+N N+ + +SSS VRS+VRYGECQKNHAANIGGYAVDGC EFLA GEEGSNGALTCAACGCHRNFHRREVE+EVVCE
Subjt:  MMKKRQVIVKR--------TDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCE

Query:  YFPP
        Y PP
Subjt:  YFPP

A0A6J1C6T5 mini zinc finger protein 26.6e-3787.23Show/hide
Query:  MMKKRQVIVKRTDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYF
        MMKKRQV+VKR++GSSNRN SSSTSSS VRS+VRYGECQKNHAANIGGYAVDGC EFLA GEEGSNGALTCAACGCHRNFHRREVE+EVV   F
Subjt:  MMKKRQVIVKRTDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYF

A0A6J1GBE8 mini zinc finger protein 12.9e-48100Show/hide
Query:  MMKKRQVIVKRTDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPPNA
        MMKKRQVIVKRTDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPPNA
Subjt:  MMKKRQVIVKRTDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPPNA

A0A6J1K9G7 mini zinc finger protein 12.9e-48100Show/hide
Query:  MMKKRQVIVKRTDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPPNA
        MMKKRQVIVKRTDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPPNA
Subjt:  MMKKRQVIVKRTDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPPNA

SwissProt top hitse value%identityAlignment
B8BIU8 Mini zinc finger protein 14.6e-1962.5Show/hide
Query:  NSSSSTSSSAVR----SLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVE
        N S++ +++A R     +VRY ECQ+NHAA+IGG+AVDGC EF+A+G EG+  AL CAACGCHR+FHRREVE
Subjt:  NSSSSTSSSAVR----SLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVE

Q0J5F8 Mini zinc finger protein 41.2e-1952.75Show/hide
Query:  MKKRQVIVKRTDGSSNRNSSSSTSS-SAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVC
        M KR VI++R +    + +++  ++       VRYGEC++NHAA +GG+AVDGC EFLA GEEG+ GAL CAACGCHR+FHRR V  +  C
Subjt:  MKKRQVIVKRTDGSSNRNSSSSTSS-SAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVC

Q2Q493 Mini zinc finger protein 34.9e-2968.04Show/hide
Query:  MKKRQVIVKRTDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPPNA
        MKKRQV++K+   S    SSSS         VRY ECQKNHAANIGGYAVDGC EF+A+   G + ALTCAACGCHRNFHRREV+TEVVCEY PPNA
Subjt:  MKKRQVIVKRTDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPPNA

Q9CA51 Mini zinc finger protein 11.2e-3269.61Show/hide
Query:  MMKKRQVIVKRTDGSSNRNSS----SSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPP
        MMKKRQ+++K+   +SN +SS    SS+SSS+  S VRY ECQKNHAANIGGYAVDGC EF+A G EG+  AL CAACGCHRNFHR+EV+TEVVCEY PP
Subjt:  MMKKRQVIVKRTDGSSNRNSS----SSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPP

Query:  NA
        NA
Subjt:  NA

Q9LJW5 Mini zinc finger protein 27.1e-2865.62Show/hide
Query:  MKKRQVIVKRTDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLAN-GEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPP
        M+KRQV+++R        SSS+ SS  VR+ VRYGECQKNHAA +GGYAVDGC EF+A+ GEEG+  ALTCAACGCHR+FHRRE+ETEVVC+   P
Subjt:  MKKRQVIVKRTDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLAN-GEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPP

Arabidopsis top hitse value%identityAlignment
AT1G14440.1 homeobox protein 312.3e-1856.72Show/hide
Query:  RSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPP
        + +++Y EC KNHAA +GG A DGC EF+ +GE+GS  ALTC+AC CHRNFHR+EVE E+      P
Subjt:  RSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPP

AT1G18835.1 mini zinc finger3.5e-3068.04Show/hide
Query:  MKKRQVIVKRTDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPPNA
        MKKRQV++K+   S    SSSS         VRY ECQKNHAANIGGYAVDGC EF+A+   G + ALTCAACGCHRNFHRREV+TEVVCEY PPNA
Subjt:  MKKRQVIVKRTDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPPNA

AT1G74660.1 mini zinc finger 18.9e-3469.61Show/hide
Query:  MMKKRQVIVKRTDGSSNRNSS----SSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPP
        MMKKRQ+++K+   +SN +SS    SS+SSS+  S VRY ECQKNHAANIGGYAVDGC EF+A G EG+  AL CAACGCHRNFHR+EV+TEVVCEY PP
Subjt:  MMKKRQVIVKRTDGSSNRNSS----SSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPP

Query:  NA
        NA
Subjt:  NA

AT3G28917.1 mini zinc finger 25.0e-2965.62Show/hide
Query:  MKKRQVIVKRTDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLAN-GEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPP
        M+KRQV+++R        SSS+ SS  VR+ VRYGECQKNHAA +GGYAVDGC EF+A+ GEEG+  ALTCAACGCHR+FHRRE+ETEVVC+   P
Subjt:  MKKRQVIVKRTDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLAN-GEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPP

AT4G24660.1 homeobox protein 223.6e-1954.67Show/hide
Query:  DGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVET
        +G+++        S  V + +RY EC KNHA NIGG+AVDGC EF+ +GE+G+  AL CAACGCHRNFHR+E E+
Subjt:  DGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAGAAACGCCAAGTGATTGTGAAAAGAACAGATGGATCATCAAATAGGAACAGCAGCAGCAGCACATCATCATCAGCTGTGAGAAGCTTGGTTAGATATGGAGA
GTGTCAAAAGAATCATGCTGCCAATATTGGTGGATATGCTGTTGATGGGTGCACAGAATTTCTTGCAAATGGTGAAGAAGGCTCTAATGGAGCTCTTACTTGTGCTGCTT
GTGGCTGCCACAGGAACTTCCATAGAAGAGAAGTTGAAACTGAAGTGGTTTGTGAATACTTTCCTCCAAATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGAAGAAACGCCAAGTGATTGTGAAAAGAACAGATGGATCATCAAATAGGAACAGCAGCAGCAGCACATCATCATCAGCTGTGAGAAGCTTGGTTAGATATGGAGA
GTGTCAAAAGAATCATGCTGCCAATATTGGTGGATATGCTGTTGATGGGTGCACAGAATTTCTTGCAAATGGTGAAGAAGGCTCTAATGGAGCTCTTACTTGTGCTGCTT
GTGGCTGCCACAGGAACTTCCATAGAAGAGAAGTTGAAACTGAAGTGGTTTGTGAATACTTTCCTCCAAATGCTTGA
Protein sequenceShow/hide protein sequence
MMKKRQVIVKRTDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYFPPNA