; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg21702 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21702
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLYR motif-containing protein 4
Genome locationCarg_Chr01:4572387..4572653
RNA-Seq ExpressionCarg21702
SyntenyCarg21702
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607477.1 LYR motif-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia]5.0e-38100Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVNS
        MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVNS
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVNS

KGN64034.1 hypothetical protein Csa_014098 [Cucumis sativus]4.8e-3389.66Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN
        MA PS SEIL+LFRSLLRTARQFPDYNIREY KRRTID+FRENQ+LSD SSISSVYAGG+AQLEVAKRQA+VYSLYAPKVKSIMDVN
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN

XP_009623746.1 LYR motif-containing protein 4 [Nicotiana tomentosiformis]1.9e-2975.86Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN
        MA+PSR E+LTLFRSLL+TARQFPDYNIREYTKRRTID FR+N+ LSDPS +++ ++ G+AQLEVAKRQA+VYSLYAPKVKS+M++N
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN

XP_022137452.1 LYR motif-containing protein 4 [Momordica charantia]2.2e-3393.02Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDV
        MA PSRSEIL+LFRSLLRTARQF DYNIREYTKRR IDAFREN+SLSDPSSISS YAGGKAQLEVAKRQALVYSLYAPKVKSIMDV
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDV

XP_038894896.1 LYR motif-containing protein 4 [Benincasa hispida]4.0e-3594.25Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN
        MA PSRSE+L+LFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSD SSISS YAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN

TrEMBL top hitse value%identityAlignment
A0A0A0LST7 Uncharacterized protein2.3e-3389.66Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN
        MA PS SEIL+LFRSLLRTARQFPDYNIREY KRRTID+FRENQ+LSD SSISSVYAGG+AQLEVAKRQA+VYSLYAPKVKSIMDVN
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN

A0A1J6JR59 Uncharacterized protein1.6e-2974.71Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN
        MA+PSR E+LTLFRSLL+TARQFPDYNIREYTKRRTIDAF++N+ LSDPS +++ ++ G++QLEVAKRQA+VYSLYAPKVKS+M++N
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN

A0A1S3XFP4 LYR motif-containing protein 49.2e-3075.86Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN
        MA+PSR E+LTLFRSLL+TARQFPDYNIREYTKRRTID FR+N+ LSDPS +++ ++ G+AQLEVAKRQA+VYSLYAPKVKS+M++N
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN

A0A251UU63 Putative complex 1 LYR protein9.2e-3079.07Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDV
        MA PSRSEILTLFRSLLR+ARQFPDYNIREYTKRRTIDAFR N++LS+PSSI++ ++ G++QL+VAKRQA+VYSLYAPK+KSIMD+
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDV

A0A6J1C8A4 LYR motif-containing protein 41.1e-3393.02Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDV
        MA PSRSEIL+LFRSLLRTARQF DYNIREYTKRR IDAFREN+SLSDPSSISS YAGGKAQLEVAKRQALVYSLYAPKVKSIMDV
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDV

SwissProt top hitse value%identityAlignment
B5FZA8 LYR motif-containing protein 44.1e-1145.45Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYA
        MAA SR+++L L+R+LLR +++F  YN R Y  RR  DAFREN++++D   I  +    KA LEV +RQ  +  +YA
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYA

B5XD90 LYR motif-containing protein 4B6.6e-0934.94Show/hide
Query:  APSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMD
        A   +++L+L+R L++ + +FP YN R Y  RR  DAFR N+S+ DP  +  +   G+  L++ +RQ  +  +Y P  K+I++
Subjt:  APSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMD

Q0VCG0 LYR motif-containing protein 42.3e-0940.26Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYA
        MAA SR+++L L+R++LR +++F  YN R Y  RR  DAFREN+++ DP  I ++    K  L + +RQ  +  +Y+
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYA

Q8K215 LYR motif-containing protein 43.5e-1041.56Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYA
        MAA SR+++L L+R+++R ++ F  YN R Y  RR  DAFREN+++ DP  I ++    K  LE+ +RQ  +  LY+
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYA

Q9HD34 LYR motif-containing protein 43.5e-1042.86Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYA
        MAA SR+++L+L+R++LR +++F  YN R Y  RR  DAFREN+++ DP  I ++    K  L V +RQ  +  LY+
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYA

Arabidopsis top hitse value%identityAlignment
AT5G61220.1 LYR family of Fe/S cluster biogenesis protein3.5e-2159.76Show/hide
Query:  SRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDV
        S SE+L+L R+LLR  RQFPDYNIREY+KRRT+D FR N++L+DPS ++  YA  K QL VA+R   VY  Y PK K+IM+V
Subjt:  SRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTCCATCGAGGTCTGAAATCCTCACGCTCTTTCGTTCCCTTCTTCGCACGGCGCGTCAATTCCCCGATTACAACATCAGAGAATACACCAAACGCCGCACCAT
TGATGCCTTCCGAGAAAATCAGAGCCTCTCTGACCCTTCATCCATCTCCTCCGTATACGCTGGCGGAAAAGCTCAGCTCGAGGTTGCGAAGCGGCAGGCCCTTGTTTACT
CTCTTTACGCGCCTAAGGTCAAGAGTATCATGGATGTCAACTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCTCCATCGAGGTCTGAAATCCTCACGCTCTTTCGTTCCCTTCTTCGCACGGCGCGTCAATTCCCCGATTACAACATCAGAGAATACACCAAACGCCGCACCAT
TGATGCCTTCCGAGAAAATCAGAGCCTCTCTGACCCTTCATCCATCTCCTCCGTATACGCTGGCGGAAAAGCTCAGCTCGAGGTTGCGAAGCGGCAGGCCCTTGTTTACT
CTCTTTACGCGCCTAAGGTCAAGAGTATCATGGATGTCAACTCCTGA
Protein sequenceShow/hide protein sequence
MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGKAQLEVAKRQALVYSLYAPKVKSIMDVNS