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Carg21745 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21745
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionArabinogalactan peptide
Genome locationCarg_Chr09:1502329..1503809
RNA-Seq ExpressionCarg21745
SyntenyCarg21745
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591454.1 hypothetical protein SDJN03_13800, partial [Cucurbita argyrosperma subsp. sororia]1.7e-22100Show/hide
Query:  EIFRAMAAVSKTSFMALVAVLFTVVSVAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALVFGSALKA
        EIFRAMAAVSKTSFMALVAVLFTVVSVAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALVFGSALKA
Subjt:  EIFRAMAAVSKTSFMALVAVLFTVVSVAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALVFGSALKA

KAG6598305.1 hypothetical protein SDJN03_08083, partial [Cucurbita argyrosperma subsp. sororia]7.8e-0756.52Show/hide
Query:  EIFRAMAAVSKTSFMALVAVLFTVVSVAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALVFGSALK
        +I  +MA VS+ S +AL+A++F V SVA   + E+PAP+PASPATS+ PS   ACV AFVAL FGS L+
Subjt:  EIFRAMAAVSKTSFMALVAVLFTVVSVAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALVFGSALK

KAG7024335.1 hypothetical protein SDJN02_13149, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-32100Show/hide
Query:  MAQAFPRLSIFFGFLLTLEIFRAMAAVSKTSFMALVAVLFTVVSVAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALVFGSALKA
        MAQAFPRLSIFFGFLLTLEIFRAMAAVSKTSFMALVAVLFTVVSVAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALVFGSALKA
Subjt:  MAQAFPRLSIFFGFLLTLEIFRAMAAVSKTSFMALVAVLFTVVSVAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALVFGSALKA

KGN55315.1 hypothetical protein Csa_012200 [Cucumis sativus]7.0e-1687.69Show/hide
Query:  MAAVSKTSFMALVAVLFTVVSVAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALVFGSALKA
        MAAVSK SFMALVAVLF V+SVAVAQSAESPAP PASPA SVVPSLS ACVGAF+AL+FGSALKA
Subjt:  MAAVSKTSFMALVAVLFTVVSVAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALVFGSALKA

KGN62403.1 hypothetical protein Csa_018595 [Cucumis sativus]8.6e-0654.41Show/hide
Query:  IFRAMAAVSKTSFMALVAVLFTVVSVAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALVFGSALK
        +F  MAA+SK S +AL+A++F + SVA   + E+PAP+PASPATS+ PS   AC+ AF+AL FGS L+
Subjt:  IFRAMAAVSKTSFMALVAVLFTVVSVAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALVFGSALK

TrEMBL top hitse value%identityAlignment
A0A0A0LKU1 Uncharacterized protein4.2e-0654.41Show/hide
Query:  IFRAMAAVSKTSFMALVAVLFTVVSVAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALVFGSALK
        +F  MAA+SK S +AL+A++F + SVA   + E+PAP+PASPATS+ PS   AC+ AF+AL FGS L+
Subjt:  IFRAMAAVSKTSFMALVAVLFTVVSVAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALVFGSALK

A0A2P5DTQ4 Arabinogalactan peptide6.7e-0453.12Show/hide
Query:  AAVSKTSFMALVAVLFTVVS-VAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALVFGSALK
        A+ S  S + L+AV+ TV+S V  A +AE+PAP+PASPA+++ PS   AC+ A VALVFGSA++
Subjt:  AAVSKTSFMALVAVLFTVVS-VAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALVFGSALK

A0A2P5EL16 Arabinogalactan peptide8.7e-0454.1Show/hide
Query:  SKTSFMALVAVLFTVVS-VAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALVFGSALK
        S  S + L+AV+ TV+S V  A +AE+PAP+PASPA+++ PS   AC+ A VALVFGSA++
Subjt:  SKTSFMALVAVLFTVVS-VAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALVFGSALK

Q96504 CRG163.4e-1687.69Show/hide
Query:  MAAVSKTSFMALVAVLFTVVSVAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALVFGSALKA
        MAAVSK SFMALVAVLF V+SVAVAQSAESPAP PASPA SVVPSLS ACVGAF+AL+FGSALKA
Subjt:  MAAVSKTSFMALVAVLFTVVSVAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALVFGSALKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCAGGCATTTCCTAGGCTCTCAATTTTCTTCGGTTTTCTCTTAACCCTAGAAATTTTCAGAGCAATGGCCGCCGTCTCTAAGACTTCATTCATGGCTCTTGTAGC
CGTCCTGTTCACCGTCGTCTCCGTTGCAGTTGCACAATCTGCTGAGTCCCCTGCTCCTGCACCGGCTTCTCCGGCTACCTCTGTCGTCCCGTCGTTGAGCGTCGCTTGCG
TTGGTGCTTTCGTCGCTCTTGTCTTTGGATCTGCACTCAAGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCAGGCATTTCCTAGGCTCTCAATTTTCTTCGGTTTTCTCTTAACCCTAGAAATTTTCAGAGCAATGGCCGCCGTCTCTAAGACTTCATTCATGGCTCTTGTAGC
CGTCCTGTTCACCGTCGTCTCCGTTGCAGTTGCACAATCTGCTGAGTCCCCTGCTCCTGCACCGGCTTCTCCGGCTACCTCTGTCGTCCCGTCGTTGAGCGTCGCTTGCG
TTGGTGCTTTCGTCGCTCTTGTCTTTGGATCTGCACTCAAGGCTTGA
Protein sequenceShow/hide protein sequence
MAQAFPRLSIFFGFLLTLEIFRAMAAVSKTSFMALVAVLFTVVSVAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALVFGSALKA