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Carg21752 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21752
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription factor MYB36-like
Genome locationCarg_Chr09:1470040..1470537
RNA-Seq ExpressionCarg21752
SyntenyCarg21752
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591448.1 Transcription factor RAX3, partial [Cucurbita argyrosperma subsp. sororia]1.2e-8098.7Show/hide
Query:  SEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTPRQLSGVDLSKTDDVQFGMDGGSCLPVTSCQVGELEKVVYSNTA
        SEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTPRQLSGVDLSKTDDVQFGMDGGSCLP TSCQVGELEKVVYSNTA
Subjt:  SEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTPRQLSGVDLSKTDDVQFGMDGGSCLPVTSCQVGELEKVVYSNTA

Query:  SFEDGLQFSYDNNGLMNDLDWGEMSCLISAPLYSSMAHDSMIGSSYLEQQKQKQ
        SFEDGLQFSYDNNGLMNDLDWGEMSCLISAPLYSSMAHDSMIGSSYL+QQKQKQ
Subjt:  SFEDGLQFSYDNNGLMNDLDWGEMSCLISAPLYSSMAHDSMIGSSYLEQQKQKQ

KAG7024328.1 hypothetical protein SDJN02_13142, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-88100Show/hide
Query:  MHLESNPSYFISEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTPRQLSGVDLSKTDDVQFGMDGGSCLPVTSCQVG
        MHLESNPSYFISEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTPRQLSGVDLSKTDDVQFGMDGGSCLPVTSCQVG
Subjt:  MHLESNPSYFISEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTPRQLSGVDLSKTDDVQFGMDGGSCLPVTSCQVG

Query:  ELEKVVYSNTASFEDGLQFSYDNNGLMNDLDWGEMSCLISAPLYSSMAHDSMIGSSYLEQQKQKQ
        ELEKVVYSNTASFEDGLQFSYDNNGLMNDLDWGEMSCLISAPLYSSMAHDSMIGSSYLEQQKQKQ
Subjt:  ELEKVVYSNTASFEDGLQFSYDNNGLMNDLDWGEMSCLISAPLYSSMAHDSMIGSSYLEQQKQKQ

XP_004141414.1 transcription factor MYB36 [Cucumis sativus]3.0e-4475.35Show/hide
Query:  SEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTP-RQLSGV--DLSKTDDV-QFGMDGGSCLPVTSCQVGELEKVVY
        S IGNSM IVFDN  IY+NNNNNNQSPFLPEL+PALNS PPPPPYA+YQPLQFPS      +GV  DL +TD V +FGM+G S  PVTS  VGELEKVVY
Subjt:  SEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTP-RQLSGV--DLSKTDDV-QFGMDGGSCLPVTSCQVGELEKVVY

Query:  SNTASFEDGLQFSYDNNG--LMNDLDWGEMSCLISAPLYSSM
        SNT SF+DGLQFS DNNG  LMNDLDWGEMS LISAPLY SM
Subjt:  SNTASFEDGLQFSYDNNG--LMNDLDWGEMSCLISAPLYSSM

XP_022935801.1 transcription factor MYB36-like [Cucurbita moschata]1.8e-81100Show/hide
Query:  SEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTPRQLSGVDLSKTDDVQFGMDGGSCLPVTSCQVGELEKVVYSNTA
        SEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTPRQLSGVDLSKTDDVQFGMDGGSCLPVTSCQVGELEKVVYSNTA
Subjt:  SEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTPRQLSGVDLSKTDDVQFGMDGGSCLPVTSCQVGELEKVVYSNTA

Query:  SFEDGLQFSYDNNGLMNDLDWGEMSCLISAPLYSSMAHDSMIGSSYLEQQKQKQ
        SFEDGLQFSYDNNGLMNDLDWGEMSCLISAPLYSSMAHDSMIGSSYLEQQKQKQ
Subjt:  SFEDGLQFSYDNNGLMNDLDWGEMSCLISAPLYSSMAHDSMIGSSYLEQQKQKQ

XP_022977086.1 transcription factor MYB87-like [Cucurbita maxima]5.3e-7392.86Show/hide
Query:  SEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTPRQLSGVDLSKTDDVQFGMDGGSCLPVTSCQVGELEKVVYSNTA
        SEIGNSMDIVFDNHVIYD  N+NNQ PFLPELT ALNSPPPPPPYANYQPLQFPSTP+QLSGVDLS+ DDVQF MDGGSCLP TSCQVGELEKVVYSNTA
Subjt:  SEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTPRQLSGVDLSKTDDVQFGMDGGSCLPVTSCQVGELEKVVYSNTA

Query:  SFEDGLQFSYDNNGLMNDLDWGEMSCLISAPLYSSMAHDSMIGSSYLEQQKQKQ
        SFEDGLQFSYDNNGLMNDLDWGEMSCLISAP YSSMAHDSMIGSSYLEQQKQKQ
Subjt:  SFEDGLQFSYDNNGLMNDLDWGEMSCLISAPLYSSMAHDSMIGSSYLEQQKQKQ

TrEMBL top hitse value%identityAlignment
A0A1S3BTV1 transcription factor MYB36-like1.9e-4476.76Show/hide
Query:  SEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTP-RQLSGV--DLSKTDDV-QFGMDGGSCLPVTSCQVGELEKVVY
        S IGNSM IVFDN  IY NNNNNNQSPFLP+L+PALNS PPPPPYANYQPLQF S      +GV  DL +TD V QFGMDG SC PVTS  VGELEKVVY
Subjt:  SEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTP-RQLSGV--DLSKTDDV-QFGMDGGSCLPVTSCQVGELEKVVY

Query:  SNTASFEDGLQFSYDNNG--LMNDLDWGEMSCLISAPLYSSM
        SNT SF+DGLQFS DNNG  LMNDLDWGEMS LISAPLY SM
Subjt:  SNTASFEDGLQFSYDNNG--LMNDLDWGEMSCLISAPLYSSM

A0A5A7VBY6 Transcription factor MYB36-like1.9e-4476.76Show/hide
Query:  SEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTP-RQLSGV--DLSKTDDV-QFGMDGGSCLPVTSCQVGELEKVVY
        S IGNSM IVFDN  IY NNNNNNQSPFLP+L+PALNS PPPPPYANYQPLQF S      +GV  DL +TD V QFGMDG SC PVTS  VGELEKVVY
Subjt:  SEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTP-RQLSGV--DLSKTDDV-QFGMDGGSCLPVTSCQVGELEKVVY

Query:  SNTASFEDGLQFSYDNNG--LMNDLDWGEMSCLISAPLYSSM
        SNT SF+DGLQFS DNNG  LMNDLDWGEMS LISAPLY SM
Subjt:  SNTASFEDGLQFSYDNNG--LMNDLDWGEMSCLISAPLYSSM

A0A6J1F5R0 transcription factor MYB36-like8.7e-82100Show/hide
Query:  SEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTPRQLSGVDLSKTDDVQFGMDGGSCLPVTSCQVGELEKVVYSNTA
        SEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTPRQLSGVDLSKTDDVQFGMDGGSCLPVTSCQVGELEKVVYSNTA
Subjt:  SEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTPRQLSGVDLSKTDDVQFGMDGGSCLPVTSCQVGELEKVVYSNTA

Query:  SFEDGLQFSYDNNGLMNDLDWGEMSCLISAPLYSSMAHDSMIGSSYLEQQKQKQ
        SFEDGLQFSYDNNGLMNDLDWGEMSCLISAPLYSSMAHDSMIGSSYLEQQKQKQ
Subjt:  SFEDGLQFSYDNNGLMNDLDWGEMSCLISAPLYSSMAHDSMIGSSYLEQQKQKQ

A0A6J1IIT0 transcription factor MYB87-like2.5e-7392.86Show/hide
Query:  SEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTPRQLSGVDLSKTDDVQFGMDGGSCLPVTSCQVGELEKVVYSNTA
        SEIGNSMDIVFDNHVIYD  N+NNQ PFLPELT ALNSPPPPPPYANYQPLQFPSTP+QLSGVDLS+ DDVQF MDGGSCLP TSCQVGELEKVVYSNTA
Subjt:  SEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTPRQLSGVDLSKTDDVQFGMDGGSCLPVTSCQVGELEKVVYSNTA

Query:  SFEDGLQFSYDNNGLMNDLDWGEMSCLISAPLYSSMAHDSMIGSSYLEQQKQKQ
        SFEDGLQFSYDNNGLMNDLDWGEMSCLISAP YSSMAHDSMIGSSYLEQQKQKQ
Subjt:  SFEDGLQFSYDNNGLMNDLDWGEMSCLISAPLYSSMAHDSMIGSSYLEQQKQKQ

A0A6J1IWI5 transcription factor MYB36-like1.9e-4468.59Show/hide
Query:  SEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTPRQL----SGVDLSKTDDVQFGMDGGSCLPVTSCQVGELEKVVY
        SEIGNSM I FDNH+       NNQSPFLPELT ALNSPPPPPP ANYQ LQFPS  +QL     G DLS+TD  QFG DG   LP+ S  VGELEKVVY
Subjt:  SEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTPRQL----SGVDLSKTDDVQFGMDGGSCLPVTSCQVGELEKVVY

Query:  SNTASFEDGLQFSYDNNGLMNDLDWGEMSCLISAPLYSSMAHDSMIGSSYLEQQKQ
        SNTASF++G       N LMN+LDWGEMS LISAPLY SMAHD M+GSS+LEQQKQ
Subjt:  SNTASFEDGLQFSYDNNGLMNDLDWGEMSCLISAPLYSSMAHDSMIGSSYLEQQKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTTGGAATCAAATCCGAGTTATTTTATATCCGAAATTGGAAATTCCATGGATATTGTCTTTGATAATCATGTTATTTATGATAATAATAATAACAATAACCAATC
ACCTTTCTTGCCGGAGTTAACCCCGGCGCTCAATTCGCCGCCGCCGCCTCCTCCGTATGCAAATTACCAACCGCTTCAATTCCCTTCAACTCCTCGGCAACTTTCCGGCG
TTGATCTGAGCAAAACAGACGATGTCCAGTTTGGAATGGATGGGGGTTCGTGTCTACCAGTGACAAGCTGCCAAGTAGGTGAGTTGGAGAAGGTTGTTTACAGCAATACG
GCGTCGTTTGAGGATGGGCTGCAGTTTTCATATGATAACAATGGGTTGATGAACGATCTAGATTGGGGGGAAATGAGTTGTTTGATTTCTGCTCCTTTATATTCCTCAAT
GGCTCATGATTCCATGATTGGTTCGTCTTATTTGGAGCAGCAAAAGCAAAAGCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCATTTGGAATCAAATCCGAGTTATTTTATATCCGAAATTGGAAATTCCATGGATATTGTCTTTGATAATCATGTTATTTATGATAATAATAATAACAATAACCAATC
ACCTTTCTTGCCGGAGTTAACCCCGGCGCTCAATTCGCCGCCGCCGCCTCCTCCGTATGCAAATTACCAACCGCTTCAATTCCCTTCAACTCCTCGGCAACTTTCCGGCG
TTGATCTGAGCAAAACAGACGATGTCCAGTTTGGAATGGATGGGGGTTCGTGTCTACCAGTGACAAGCTGCCAAGTAGGTGAGTTGGAGAAGGTTGTTTACAGCAATACG
GCGTCGTTTGAGGATGGGCTGCAGTTTTCATATGATAACAATGGGTTGATGAACGATCTAGATTGGGGGGAAATGAGTTGTTTGATTTCTGCTCCTTTATATTCCTCAAT
GGCTCATGATTCCATGATTGGTTCGTCTTATTTGGAGCAGCAAAAGCAAAAGCAATAG
Protein sequenceShow/hide protein sequence
MHLESNPSYFISEIGNSMDIVFDNHVIYDNNNNNNQSPFLPELTPALNSPPPPPPYANYQPLQFPSTPRQLSGVDLSKTDDVQFGMDGGSCLPVTSCQVGELEKVVYSNT
ASFEDGLQFSYDNNGLMNDLDWGEMSCLISAPLYSSMAHDSMIGSSYLEQQKQKQ