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Carg21755 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21755
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDNA binding protein
Genome locationCarg_Chr09:1451303..1451871
RNA-Seq ExpressionCarg21755
SyntenyCarg21755
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591445.1 hypothetical protein SDJN03_13791, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3191.03Show/hide
Query:  MVEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYW
        MVEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKL      RG W
Subjt:  MVEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYW

KAG7024325.1 hypothetical protein SDJN02_13139 [Cucurbita argyrosperma subsp. argyrosperma]2.5e-76100Show/hide
Query:  MVEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYWTLFHRWMNRSSNWPLRRPSNAF
        MVEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYWTLFHRWMNRSSNWPLRRPSNAF
Subjt:  MVEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYWTLFHRWMNRSSNWPLRRPSNAF

Query:  LIFPKPYLSLLRSKASVRLLPRRFWPPTRRMLRLSCPTR
        LIFPKPYLSLLRSKASVRLLPRRFWPPTRRMLRLSCPTR
Subjt:  LIFPKPYLSLLRSKASVRLLPRRFWPPTRRMLRLSCPTR

XP_022936826.1 uncharacterized protein LOC111443296 [Cucurbita moschata]1.8e-2987.01Show/hide
Query:  VEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYW
        +EFSHSDPGLWSEALSSYPS+IEALGKPNLVSLD+FYRNELPPLLHKRNPSPYITTSELSKLMQWKL      RG W
Subjt:  VEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYW

XP_022977105.1 uncharacterized protein LOC111477273 [Cucurbita maxima]5.5e-3189.74Show/hide
Query:  MVEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYW
        MVEF+HSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKL      RG W
Subjt:  MVEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYW

XP_023536029.1 uncharacterized protein LOC111797290 [Cucurbita pepo subsp. pepo]2.7e-3088.46Show/hide
Query:  MVEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYW
        MVEFSHS+PGLWSEAL SYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKL      RG W
Subjt:  MVEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYW

TrEMBL top hitse value%identityAlignment
A0A0A0L3W6 Uncharacterized protein7.5e-2680.77Show/hide
Query:  MVEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYW
        M+EFS SDP LW EALS+Y SQIEALGKPNLVSLDDFYRNELP +LHKRNPSPYITTSELSKLMQWKL      RG W
Subjt:  MVEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYW

A0A5D3D9C6 Uncharacterized protein6.3e-2579.22Show/hide
Query:  VEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYW
        ++FS+SDP LW EALSSY SQIEALGKPNLVSLDDFYRNELP +LHKR PSPYITTSELSKLMQWKL      RG W
Subjt:  VEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYW

A0A6J1CCK9 uncharacterized protein LOC1110102565.7e-2680.77Show/hide
Query:  MVEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYW
        MVEF +SDP LW EALSSYPSQIEALGKPNLVSLD FYRNELP LLHKRNP+PYITT ELSKLMQWKL      RG W
Subjt:  MVEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYW

A0A6J1F8K0 uncharacterized protein LOC1114432968.5e-3087.01Show/hide
Query:  VEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYW
        +EFSHSDPGLWSEALSSYPS+IEALGKPNLVSLD+FYRNELPPLLHKRNPSPYITTSELSKLMQWKL      RG W
Subjt:  VEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYW

A0A6J1ILC1 uncharacterized protein LOC1114772732.7e-3189.74Show/hide
Query:  MVEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYW
        MVEF+HSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKL      RG W
Subjt:  MVEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G12210.1 DNA binding1.1e-2163.64Show/hide
Query:  VEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYW
        +EF  SD G+W EALSSY S+IE+L KP LVSLD FYR +LP LLH R+P+PY+TTSELS+LM+WKL      RG W
Subjt:  VEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYW

AT3G12210.2 DNA binding1.1e-2163.64Show/hide
Query:  VEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYW
        +EF  SD G+W EALSSY S+IE+L KP LVSLD FYR +LP LLH R+P+PY+TTSELS+LM+WKL      RG W
Subjt:  VEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAGTTTTCACACTCCGATCCAGGCCTCTGGAGCGAAGCTCTTTCTTCTTATCCTTCTCAAATCGAAGCCTTGGGCAAGCCGAATTTGGTTTCTCTGGATGATTT
TTACCGGAACGAACTCCCTCCTCTTCTCCACAAGCGAAACCCTAGCCCTTACATCACTACTTCCGAGCTCTCAAAACTTATGCAATGGAAGCTCATCGCGGAAAATGGAG
GCCGCGGCTATTGGACTTTGTTTCATCGTTGGATGAATCGCTCGTCAAATTGGCCTCTCAGAAGGCCTTCCAATGCCTTCCTGATATTTCCAAAGCCGTATCTGAGCTTA
CTCCGCTCAAAGGCGTCGGTCCGGCTACTGCCTCGGCGGTTCTGGCCGCCTACGCGCCGGATGTTGCGCCTTTCATGTCCGACGAGGTGA
mRNA sequenceShow/hide mRNA sequence
GACCAAGAGTTGCATTGCAGCCGCGAAAAAACGCCCGTGAAGAGTGGAGCGGCAACGTCGCATGAGCTGCAATGGTGGAGTTTTCACACTCCGATCCAGGCCTCTGGAGC
GAAGCTCTTTCTTCTTATCCTTCTCAAATCGAAGCCTTGGGCAAGCCGAATTTGGTTTCTCTGGATGATTTTTACCGGAACGAACTCCCTCCTCTTCTCCACAAGCGAAA
CCCTAGCCCTTACATCACTACTTCCGAGCTCTCAAAACTTATGCAATGGAAGCTCATCGCGGAAAATGGAGGCCGCGGCTATTGGACTTTGTTTCATCGTTGGATGAATC
GCTCGTCAAATTGGCCTCTCAGAAGGCCTTCCAATGCCTTCCTGATATTTCCAAAGCCGTATCTGAGCTTACTCCGCTCAAAGGCGTCGGTCCGGCTACTGCCTCGGCGG
TTCTGGCCGCCTACGCGCCGGATGTTGCGCCTTTCATGTCCGACGAGGTGA
Protein sequenceShow/hide protein sequence
MVEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSELSKLMQWKLIAENGGRGYWTLFHRWMNRSSNWPLRRPSNAFLIFPKPYLSL
LRSKASVRLLPRRFWPPTRRMLRLSCPTR