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Carg21756 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21756
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDNA binding
Genome locationCarg_Chr09:1449832..1451185
RNA-Seq ExpressionCarg21756
SyntenyCarg21756
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591445.1 hypothetical protein SDJN03_13791, partial [Cucurbita argyrosperma subsp. sororia]6.0e-05100Show/hide
Query:  MEAALGNSKDYSLKQYLSFAKKLQDKAK
        MEAALGNSKDYSLKQYLSFAKKLQDKAK
Subjt:  MEAALGNSKDYSLKQYLSFAKKLQDKAK
KAG7024324.1 hypothetical protein SDJN02_13138, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-31100Show/hide
Query:  MEAALGNSKDYSLKQYLSFAKKLQDKAKGFVEYGNRGKGEGFAITIRSQEWRQNRLQKKEENLISAGPSEGA
        MEAALGNSKDYSLKQYLSFAKKLQDKAKGFVEYGNRGKGEGFAITIRSQEWRQNRLQKKEENLISAGPSEGA
Subjt:  MEAALGNSKDYSLKQYLSFAKKLQDKAKGFVEYGNRGKGEGFAITIRSQEWRQNRLQKKEENLISAGPSEGA
XP_022936826.1 uncharacterized protein LOC111443296 [Cucurbita moschata]6.0e-05100Show/hide
Query:  MEAALGNSKDYSLKQYLSFAKKLQDKAK
        MEAALGNSKDYSLKQYLSFAKKLQDKAK
Subjt:  MEAALGNSKDYSLKQYLSFAKKLQDKAK
XP_022977105.1 uncharacterized protein LOC111477273 [Cucurbita maxima]1.3e-0496.43Show/hide
Query:  MEAALGNSKDYSLKQYLSFAKKLQDKAK
        MEAALGNSKDYSLKQYL+FAKKLQDKAK
Subjt:  MEAALGNSKDYSLKQYLSFAKKLQDKAK
XP_023536029.1 uncharacterized protein LOC111797290 [Cucurbita pepo subsp. pepo]6.0e-05100Show/hide
Query:  MEAALGNSKDYSLKQYLSFAKKLQDKAK
        MEAALGNSKDYSLKQYLSFAKKLQDKAK
Subjt:  MEAALGNSKDYSLKQYLSFAKKLQDKAK
TrEMBL top hitse value%identityAlignment
A0A6J1F8K0 uncharacterized protein LOC1114432962.9e-05100Show/hide
Query:  MEAALGNSKDYSLKQYLSFAKKLQDKAK
        MEAALGNSKDYSLKQYLSFAKKLQDKAK
Subjt:  MEAALGNSKDYSLKQYLSFAKKLQDKAK
A0A6J1ILC1 uncharacterized protein LOC1114772736.4e-0596.43Show/hide
Query:  MEAALGNSKDYSLKQYLSFAKKLQDKAK
        MEAALGNSKDYSLKQYL+FAKKLQDKAK
Subjt:  MEAALGNSKDYSLKQYLSFAKKLQDKAK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G12210.2 DNA binding4.0e-0789.29Show/hide
Query:  MEAALGNSKDYSLKQYLSFAKKLQDKAK
        ME ALGNSKDYSLKQYL FA KLQDKAK
Subjt:  MEAALGNSKDYSLKQYLSFAKKLQDKAK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCGGCTCTTGGCAACTCCAAGGATTATTCATTGAAGCAATACCTATCCTTCGCAAAAAAATTGCAAGATAAAGCCAAGGGCTTTGTGGAGTACGGCAATAGGGG
AAAAGGTGAAGGGTTCGCAATCACAATTAGATCCCAAGAATGGAGGCAAAACAGGCTCCAAAAGAAAGAGGAAAACTTGATTTCAGCTGGTCCAAGTGAAGGAGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCGGCTCTTGGCAACTCCAAGGATTATTCATTGAAGCAATACCTATCCTTCGCAAAAAAATTGCAAGATAAAGCCAAGGGCTTTGTGGAGTACGGCAATAGGGG
AAAAGGTGAAGGGTTCGCAATCACAATTAGATCCCAAGAATGGAGGCAAAACAGGCTCCAAAAGAAAGAGGAAAACTTGATTTCAGCTGGTCCAAGTGAAGGAGCATGA
Protein sequenceShow/hide protein sequence
MEAALGNSKDYSLKQYLSFAKKLQDKAKGFVEYGNRGKGEGFAITIRSQEWRQNRLQKKEENLISAGPSEGA