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Carg21761 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21761
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr09:1424198..1426107
RNA-Seq ExpressionCarg21761
SyntenyCarg21761
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064468.1 hypothetical protein E6C27_scaffold255G001830 [Cucumis melo var. makuwa]2.2e-3070.41Show/hide
Query:  MTCSNRAHSRGRVAFSWENKPGECKAAVAPP--FYRLGDDDLGQKKLRPPPCTSARKGQKK-VQKDGVFEDPFLAAFRECSNGEDEKNCKLKQNKTGF
        M C+N+ HSRGRVAFSWEN+PG CKAAVAPP  F    DDD  +KKL+PPPCT ARKG KK +QKDG  EDPFLAA+REC++ +DEKNCKLK+NK GF
Subjt:  MTCSNRAHSRGRVAFSWENKPGECKAAVAPP--FYRLGDDDLGQKKLRPPPCTSARKGQKK-VQKDGVFEDPFLAAFRECSNGEDEKNCKLKQNKTGF

KAE8649893.1 hypothetical protein Csa_012691 [Cucumis sativus]8.7e-2755.86Show/hide
Query:  MTCSNRAHSRGRVAFSWENKPGECKAAVAPPFYRLGDDDLGQKKLRPPPCTSARKGQKKVQKDGVFEDPFLAAFRECSNGEDEKNCKLKQNKTGFVIRPL
        M C+N+ HSRGRVAFSWENKPG CKAAVAPP      DD  +K+L+PPPCT ARKG KK+QKDG  EDPFLAA++EC++ +DEK C L      +++  L
Subjt:  MTCSNRAHSRGRVAFSWENKPGECKAAVAPPFYRLGDDDLGQKKLRPPPCTSARKGQKKVQKDGVFEDPFLAAFRECSNGEDEKNCKLKQNKTGFVIRPL

Query:  RFLTRYHTGFG
          ++   +G G
Subjt:  RFLTRYHTGFG

KAG6591440.1 Pre-mRNA-processing protein 40A, partial [Cucurbita argyrosperma subsp. sororia]1.5e-7999.32Show/hide
Query:  MTCSNRAHSRGRVAFSWENKPGECKAAVAPPFYRLGDDDLGQKKLRPPPCTSARKGQKKVQKDGVFEDPFLAAFRECSNGEDEKNCKLKQNKTGFVIRPL
        MTCSNRAHSRGRVAFSWENKPGECKAAVAPPFYRLGDDDLGQKKLRPPPCTSARKGQKKVQKDGVFEDPFLAAFRECSNGEDEKNCKLKQNKTGFVIRPL
Subjt:  MTCSNRAHSRGRVAFSWENKPGECKAAVAPPFYRLGDDDLGQKKLRPPPCTSARKGQKKVQKDGVFEDPFLAAFRECSNGEDEKNCKLKQNKTGFVIRPL

Query:  RFLTRYHTGFGATNFPTATSNNSRNFGSLFLAFGGLQLEVGLADLL
        RFLTRYHTGFGATNFPTATSNNSRNFGSLFLAFGGLQLE+GLADLL
Subjt:  RFLTRYHTGFGATNFPTATSNNSRNFGSLFLAFGGLQLEVGLADLL

KAG7024319.1 hypothetical protein SDJN02_13133, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-80100Show/hide
Query:  MTCSNRAHSRGRVAFSWENKPGECKAAVAPPFYRLGDDDLGQKKLRPPPCTSARKGQKKVQKDGVFEDPFLAAFRECSNGEDEKNCKLKQNKTGFVIRPL
        MTCSNRAHSRGRVAFSWENKPGECKAAVAPPFYRLGDDDLGQKKLRPPPCTSARKGQKKVQKDGVFEDPFLAAFRECSNGEDEKNCKLKQNKTGFVIRPL
Subjt:  MTCSNRAHSRGRVAFSWENKPGECKAAVAPPFYRLGDDDLGQKKLRPPPCTSARKGQKKVQKDGVFEDPFLAAFRECSNGEDEKNCKLKQNKTGFVIRPL

Query:  RFLTRYHTGFGATNFPTATSNNSRNFGSLFLAFGGLQLEVGLADLLVL
        RFLTRYHTGFGATNFPTATSNNSRNFGSLFLAFGGLQLEVGLADLLVL
Subjt:  RFLTRYHTGFGATNFPTATSNNSRNFGSLFLAFGGLQLEVGLADLLVL

KDO43921.1 hypothetical protein CISIN_1g044566mg, partial [Citrus sinensis]5.0e-0636.84Show/hide
Query:  MTCSNRAHSRGRVAFSWENKPGECKAAVAPPFYRLGDDDLGQKKLRPPPC-------------TSARKGQKKVQKDGVFE-DPFLAAFRECSNGEDEKNC
        M+ SN+ HS+G V FSWENKPG  K  +   F     D     KL PPPC             +S+RKG      +   + DPFL A +EC+  ++ +NC
Subjt:  MTCSNRAHSRGRVAFSWENKPGECKAAVAPPFYRLGDDDLGQKKLRPPPC-------------TSARKGQKKVQKDGVFE-DPFLAAFRECSNGEDEKNC

Query:  KL----KQNKTGFV
         +    K NKTG +
Subjt:  KL----KQNKTGFV

TrEMBL top hitse value%identityAlignment
A0A067DZ74 Uncharacterized protein (Fragment)2.4e-0636.84Show/hide
Query:  MTCSNRAHSRGRVAFSWENKPGECKAAVAPPFYRLGDDDLGQKKLRPPPC-------------TSARKGQKKVQKDGVFE-DPFLAAFRECSNGEDEKNC
        M+ SN+ HS+G V FSWENKPG  K  +   F     D     KL PPPC             +S+RKG      +   + DPFL A +EC+  ++ +NC
Subjt:  MTCSNRAHSRGRVAFSWENKPGECKAAVAPPFYRLGDDDLGQKKLRPPPC-------------TSARKGQKKVQKDGVFE-DPFLAAFRECSNGEDEKNC

Query:  KL----KQNKTGFV
         +    K NKTG +
Subjt:  KL----KQNKTGFV

A0A0A0L2M9 Uncharacterized protein3.7e-3168.42Show/hide
Query:  MTCSNRAHSRGRVAFSWENKPGECKAAVAPPFYRLGDDDLGQKKLRPPPCTSARKGQKKVQKDGVFEDPFLAAFRECSNGEDEKNCKLKQNKTGF
        M C+N+ HSRGRVAFSWENKPG CKAAVAPP      DD  +K+L+PPPCT ARKG KK+QKDG  EDPFLAA++EC++ +DEK CKLK+NK+GF
Subjt:  MTCSNRAHSRGRVAFSWENKPGECKAAVAPPFYRLGDDDLGQKKLRPPPCTSARKGQKKVQKDGVFEDPFLAAFRECSNGEDEKNCKLKQNKTGF

A0A4D6L0H4 Uncharacterized protein4.1e-0635.19Show/hide
Query:  RAHSRGRVAFSWENKPGECKA---------AVAPPFYRLGDD------DLGQKKLRPPPCTSARKGQKKVQKDGVF---EDPFLAAFRECSNGEDEKNCK
        ++HS G + FSWE+KPG CK           ++P    LG +      ++ +KK+  PPC      +   +K+  F   EDPFL A++EC+  + EKNCK
Subjt:  RAHSRGRVAFSWENKPGECKA---------AVAPPFYRLGDD------DLGQKKLRPPPCTSARKGQKKVQKDGVF---EDPFLAAFRECSNGEDEKNCK

Query:  L-KQNKTG
        + ++NK G
Subjt:  L-KQNKTG

A0A5A7VA56 Uncharacterized protein1.1e-3070.41Show/hide
Query:  MTCSNRAHSRGRVAFSWENKPGECKAAVAPP--FYRLGDDDLGQKKLRPPPCTSARKGQKK-VQKDGVFEDPFLAAFRECSNGEDEKNCKLKQNKTGF
        M C+N+ HSRGRVAFSWEN+PG CKAAVAPP  F    DDD  +KKL+PPPCT ARKG KK +QKDG  EDPFLAA+REC++ +DEKNCKLK+NK GF
Subjt:  MTCSNRAHSRGRVAFSWENKPGECKAAVAPP--FYRLGDDDLGQKKLRPPPCTSARKGQKK-VQKDGVFEDPFLAAFRECSNGEDEKNCKLKQNKTGF

V4S1V1 Uncharacterized protein5.4e-0634.13Show/hide
Query:  MTCSNRAHSRGRVAFSWENKPGECKAAVAPPFYRLGDDDLGQKKLRPPPC-------------TSARKGQKKVQKDGVFE-DPFLAAFRECSNGEDEKNC
        M+ SN+ HS+G V FSWENKPG  K  +   F     D     KL PPPC             +S+RKG      +   + DPFL A +EC+  ++ +NC
Subjt:  MTCSNRAHSRGRVAFSWENKPGECKAAVAPPFYRLGDDDLGQKKLRPPPC-------------TSARKGQKKVQKDGVFE-DPFLAAFRECSNGEDEKNC

Query:  KL----KQNKTGFVIRPLRFLTRYHT
         +    K NK G +    RF  ++++
Subjt:  KL----KQNKTGFVIRPLRFLTRYHT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTGCAGCAACAGAGCCCATTCGAGAGGCAGAGTGGCTTTCTCGTGGGAGAATAAGCCAGGGGAGTGCAAGGCAGCAGTGGCGCCGCCGTTTTACCGCCTGGGCGA
CGACGATCTGGGGCAAAAGAAGCTGCGACCACCGCCGTGTACTTCGGCGAGAAAGGGCCAGAAGAAGGTGCAGAAAGATGGGGTCTTTGAAGACCCTTTTCTTGCGGCGT
TCAGAGAGTGCAGCAATGGAGAGGACGAGAAGAATTGCAAGTTGAAGCAGAATAAAACTGGCTTCGTGATCCGACCACTCCGGTTTCTTACCCGCTACCATACTGGGTTT
GGCGCCACCAATTTTCCCACCGCAACTTCAAACAACAGCCGTAACTTTGGGTCTCTATTTCTTGCTTTTGGTGGGCTTCAACTGGAAGTTGGCTTAGCTGATCTGTTGGT
ATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCTGCAGCAACAGAGCCCATTCGAGAGGCAGAGTGGCTTTCTCGTGGGAGAATAAGCCAGGGGAGTGCAAGGCAGCAGTGGCGCCGCCGTTTTACCGCCTGGGCGA
CGACGATCTGGGGCAAAAGAAGCTGCGACCACCGCCGTGTACTTCGGCGAGAAAGGGCCAGAAGAAGGTGCAGAAAGATGGGGTCTTTGAAGACCCTTTTCTTGCGGCGT
TCAGAGAGTGCAGCAATGGAGAGGACGAGAAGAATTGCAAGTTGAAGCAGAATAAAACTGGCTTCGTGATCCGACCACTCCGGTTTCTTACCCGCTACCATACTGGGTTT
GGCGCCACCAATTTTCCCACCGCAACTTCAAACAACAGCCGTAACTTTGGGTCTCTATTTCTTGCTTTTGGTGGGCTTCAACTGGAAGTTGGCTTAGCTGATCTGTTGGT
ATTGTGA
Protein sequenceShow/hide protein sequence
MTCSNRAHSRGRVAFSWENKPGECKAAVAPPFYRLGDDDLGQKKLRPPPCTSARKGQKKVQKDGVFEDPFLAAFRECSNGEDEKNCKLKQNKTGFVIRPLRFLTRYHTGF
GATNFPTATSNNSRNFGSLFLAFGGLQLEVGLADLLVL