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Carg21786 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21786
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGlycosyl hydrolase family 35 protein
Genome locationCarg_Chr09:1295960..1296326
RNA-Seq ExpressionCarg21786
SyntenyCarg21786
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591414.1 hypothetical protein SDJN03_13760, partial [Cucurbita argyrosperma subsp. sororia]5.6e-45100Show/hide
Query:  MALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
        MALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
Subjt:  MALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA

KAG7024294.1 hypothetical protein SDJN02_13108, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-45100Show/hide
Query:  MALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
        MALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
Subjt:  MALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA

XP_022937047.1 uncharacterized protein LOC111443464 [Cucurbita moschata]4.7e-4497.75Show/hide
Query:  MALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
        MALSHHHV+PNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYP+IDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
Subjt:  MALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA

XP_022977124.1 uncharacterized protein LOC111477287 [Cucurbita maxima]3.1e-4395.51Show/hide
Query:  MALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
        MALSHHHVNPNECLSD+PFNRKLKFQTD+HNSLGKK VHPGDLKLDDYP+IDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
Subjt:  MALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA

XP_023536374.1 uncharacterized protein LOC111797561 [Cucurbita pepo subsp. pepo]1.1e-4094.44Show/hide
Query:  MALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPI-PPPPDQPGDYA
        MALSHHHVNPNECL DIPFNRKLKFQT KHNSLGKKKV+PGDLKLDDYP+IDPVPSSKTSVKPGPIEHGAPLLPHMPI PPPPDQPGDYA
Subjt:  MALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPI-PPPPDQPGDYA

TrEMBL top hitse value%identityAlignment
A0A0A0L2J3 Uncharacterized protein6.9e-3379.78Show/hide
Query:  MALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
        +AL+HHHVN N+CLSDI  NRKLKFQTD+H + G+KKVHP DL LDDY  IDPVPSSKTSVKPGPIEHGAPLLPHMP PPPP QPG YA
Subjt:  MALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA

A0A1S3BV38 uncharacterized protein LOC1034935951.4e-3378.65Show/hide
Query:  MALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
        +AL+ HHVN  +CLSD+P NRKLKFQTD+H++LG+KKVHPGDL LDDY  IDPVPSSKTSVKPGPIEH APLLPHMP PPPP+QPG YA
Subjt:  MALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA

A0A5A7VB21 Uncharacterized protein1.4e-3378.65Show/hide
Query:  MALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
        +AL+ HHVN  +CLSD+P NRKLKFQTD+H++LG+KKVHPGDL LDDY  IDPVPSSKTSVKPGPIEH APLLPHMP PPPP+QPG YA
Subjt:  MALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA

A0A6J1FA15 uncharacterized protein LOC1114434642.3e-4497.75Show/hide
Query:  MALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
        MALSHHHV+PNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYP+IDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
Subjt:  MALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA

A0A6J1IQK4 uncharacterized protein LOC1114772871.5e-4395.51Show/hide
Query:  MALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
        MALSHHHVNPNECLSD+PFNRKLKFQTD+HNSLGKK VHPGDLKLDDYP+IDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA
Subjt:  MALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G01075.1 Glycosyl hydrolase family 35 protein1.9e-0658.97Show/hide
Query:  LDDYP-SIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPP
        L+DY   +DP P++K S+KPGPIEHG PL P++P PP P
Subjt:  LDDYP-SIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTGAGCCACCACCATGTCAATCCAAACGAATGCTTGTCTGACATACCCTTTAACAGGAAGCTGAAGTTCCAGACTGATAAACATAATAGCCTGGGGAAAAAGAA
GGTTCACCCAGGTGATCTTAAACTTGATGACTACCCTTCCATTGACCCAGTTCCAAGCTCAAAGACATCAGTCAAACCCGGGCCAATAGAGCATGGGGCTCCTCTCCTTC
CTCATATGCCAATTCCTCCTCCTCCTGACCAGCCGGGCGATTATGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTGAGCCACCACCATGTCAATCCAAACGAATGCTTGTCTGACATACCCTTTAACAGGAAGCTGAAGTTCCAGACTGATAAACATAATAGCCTGGGGAAAAAGAA
GGTTCACCCAGGTGATCTTAAACTTGATGACTACCCTTCCATTGACCCAGTTCCAAGCTCAAAGACATCAGTCAAACCCGGGCCAATAGAGCATGGGGCTCCTCTCCTTC
CTCATATGCCAATTCCTCCTCCTCCTGACCAGCCGGGCGATTATGCTTAG
Protein sequenceShow/hide protein sequence
MALSHHHVNPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPSIDPVPSSKTSVKPGPIEHGAPLLPHMPIPPPPDQPGDYA