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Carg21787 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21787
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRan-binding protein like
Genome locationCarg_Chr09:1293445..1294638
RNA-Seq ExpressionCarg21787
SyntenyCarg21787
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY15758.1 Uncharacterized protein TCM_034727 [Theobroma cacao]1.9e-1257.14Show/hide
Query:  MGWWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNEKEVVGVQERRRKRRSLLNILWW
        M ++ RMT P+RR    +A+RLG RK GLLKL +DVR+CEY DV VMWEM++RNE E VG   RR K+R L N   W
Subjt:  MGWWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNEKEVVGVQERRRKRRSLLNILWW

KAG6591414.1 hypothetical protein SDJN03_13760, partial [Cucurbita argyrosperma subsp. sororia]3.6e-43100Show/hide
Query:  RGVEAEQTTMGWWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNEKEVVGVQERRRKRRSLLNILWWGGS
        RGVEAEQTTMGWWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNEKEVVGVQERRRKRRSLLNILWWGGS
Subjt:  RGVEAEQTTMGWWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNEKEVVGVQERRRKRRSLLNILWWGGS

KAG6608437.1 hypothetical protein SDJN03_01779, partial [Cucurbita argyrosperma subsp. sororia]8.5e-2961.9Show/hide
Query:  MRFGGKARGVEAEQTTMGWWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNEKEVVGVQE-RRRKRRSLLNILWWGGSGAC
        ++F   A  +  E + M WW ++ SPLRRF+ R+ASRLG+RKRGLLKLGRDV+ACEY DV VMWEM+KRNE E VG+ E RRRK+R + NI WW  S  C
Subjt:  MRFGGKARGVEAEQTTMGWWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNEKEVVGVQE-RRRKRRSLLNILWWGGSGAC

Query:  IGCRF
        IGCRF
Subjt:  IGCRF

KAG7024293.1 hypothetical protein SDJN02_13107, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-71100Show/hide
Query:  MRFCEESDVAREGQSRTVASGERRIWRNSRLMRFGGKARGVEAEQTTMGWWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKR
        MRFCEESDVAREGQSRTVASGERRIWRNSRLMRFGGKARGVEAEQTTMGWWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKR
Subjt:  MRFCEESDVAREGQSRTVASGERRIWRNSRLMRFGGKARGVEAEQTTMGWWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKR

Query:  NEKEVVGVQERRRKRRSLLNILWWGGSGACIGCRF
        NEKEVVGVQERRRKRRSLLNILWWGGSGACIGCRF
Subjt:  NEKEVVGVQERRRKRRSLLNILWWGGSGACIGCRF

XP_027923459.1 uncharacterized protein LOC114181253 isoform X2 [Vigna unguiculata]1.9e-1255.71Show/hide
Query:  MGWWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNEKEVVGVQERRRKRRS
        + WW  M  PLRR  F +A+R GFRK GLLKL  DVRACEY D+QVMWEM+ RNE E     ++  K  S
Subjt:  MGWWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNEKEVVGVQERRRKRRS

TrEMBL top hitse value%identityAlignment
A0A061FFT5 Uncharacterized protein9.2e-1357.14Show/hide
Query:  MGWWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNEKEVVGVQERRRKRRSLLNILWW
        M ++ RMT P+RR    +A+RLG RK GLLKL +DVR+CEY DV VMWEM++RNE E VG   RR K+R L N   W
Subjt:  MGWWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNEKEVVGVQERRRKRRSLLNILWW

A0A0A0L522 Uncharacterized protein2.8e-2565.12Show/hide
Query:  MGWWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNE-KEVVGVQERRRKRRSLLNILWWGGSGACIG
        M WW +M++PLR F+FR+A RLGFRKRGL+KLGRDV+ACEY DV VMWEM+KRNE  +++G  ERR+KR+SL NI WW  S  C+G
Subjt:  MGWWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNE-KEVVGVQERRRKRRSLLNILWWGGSGACIG

A0A0B2RLV9 Uncharacterized protein2.7e-1247.73Show/hide
Query:  WWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNEKEVVGVQERRR---KRRSLLNILWWGGSGACIGCR
        WW  M  P+RR  F +A RLG RK GLLKL  DVRACEY D+QVMWE++ RNE E       R+   K+     +L W     C+ CR
Subjt:  WWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNEKEVVGVQERRR---KRRSLLNILWWGGSGACIGCR

A0A218WD46 uncharacterized protein LOC1162151541.2e-1251.35Show/hide
Query:  WSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNEKEVVGVQERRRKRRSLLNILWW
        W +M  PLR     +A+RLG R RGLLKL +DVR CEY DV VMW M+K+NE E   +  +RRK+RS  +   W
Subjt:  WSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNEKEVVGVQERRRKRRSLLNILWW

A0A7N2RF01 Uncharacterized protein1.2e-1248.86Show/hide
Query:  TMGWWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNEKEVVGVQERRRKRRSLLNILWWGGSGACIGCR
        +M WW ++  P+RR    +A+RLG RK GLLKL  DV  CEY DV+VMWEM+KR+E E   V   + K+RS  NI  W     C+ CR
Subjt:  TMGWWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNEKEVVGVQERRRKRRSLLNILWWGGSGACIGCR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G43150.1 unknown protein3.2e-1041.18Show/hide
Query:  WWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNEKEV-VGVQERRRKRR
        WW+ M  P RR   R   R+GFR  GLL+L  DV +CEY D+ +MW ++ +NE    V +Q+++++R+
Subjt:  WWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNEKEV-VGVQERRRKRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGTTTTGTGAAGAATCGGATGTGGCGCGAGAAGGACAGAGTCGGACGGTCGCATCCGGTGAGAGGCGGATCTGGAGAAACAGTCGGCTGATGAGATTTGGCGGAAA
AGCGCGGGGAGTTGAAGCAGAGCAGACGACAATGGGATGGTGGAGCAGGATGACCTCTCCGTTGCGAAGATTTAGCTTCAGAATCGCGTCTCGTCTAGGATTTCGCAAAC
GCGGACTGCTGAAACTTGGGCGAGATGTGAGGGCTTGCGAATACGGGGACGTGCAGGTGATGTGGGAGATGGTGAAGAGAAACGAAAAGGAGGTGGTTGGCGTCCAGGAG
AGACGGCGAAAGAGGAGATCGTTGTTGAATATCTTGTGGTGGGGTGGATCAGGTGCATGCATTGGCTGCAGATTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGGTTTTGTGAAGAATCGGATGTGGCGCGAGAAGGACAGAGTCGGACGGTCGCATCCGGTGAGAGGCGGATCTGGAGAAACAGTCGGCTGATGAGATTTGGCGGAAA
AGCGCGGGGAGTTGAAGCAGAGCAGACGACAATGGGATGGTGGAGCAGGATGACCTCTCCGTTGCGAAGATTTAGCTTCAGAATCGCGTCTCGTCTAGGATTTCGCAAAC
GCGGACTGCTGAAACTTGGGCGAGATGTGAGGGCTTGCGAATACGGGGACGTGCAGGTGATGTGGGAGATGGTGAAGAGAAACGAAAAGGAGGTGGTTGGCGTCCAGGAG
AGACGGCGAAAGAGGAGATCGTTGTTGAATATCTTGTGGTGGGGTGGATCAGGTGCATGCATTGGCTGCAGATTCTGAACAATTCACTTCACAATCCATCCCCACTCTTC
TGTTATAAATCCGGCACCATGAATTTGGGTCACAAACAGATTCAAAGTCGAAGAAAAAATCTGCACTCTACACTGATTCGAAGAAGAGGAAGAAGTGATTGCGCAGTTTA
ATCCAATCTTGACCAGACCCCCTCGCTTCTCTCCTTGCTTCCTTATCTATAAAATAATAAACTAAATTTTGGTATATGCAATTTCATCGTTTTTCTTTATCTCTCGTTTC
CAATATTCATACTGTGGATTGCTGATTCAATACCCAATCCTTTTTCCCTCCGGAAACGAATAATTATTAATGTTCTCCATATTTTTAGATTAATCTTATTTTACAAGCCA
ACGTTCTTACAATATAATTTTTCAAAGAACAAAAACAGAGCATCTTTATTGATGCACTTTATGGCTGTTATTA
Protein sequenceShow/hide protein sequence
MRFCEESDVAREGQSRTVASGERRIWRNSRLMRFGGKARGVEAEQTTMGWWSRMTSPLRRFSFRIASRLGFRKRGLLKLGRDVRACEYGDVQVMWEMVKRNEKEVVGVQE
RRRKRRSLLNILWWGGSGACIGCRF