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Carg21790 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21790
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1
Genome locationCarg_Chr09:1288734..1290639
RNA-Seq ExpressionCarg21790
SyntenyCarg21790
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024290.1 hypothetical protein SDJN02_13104 [Cucurbita argyrosperma subsp. argyrosperma]9.7e-52100Show/hide
Query:  MGLASDSVLVSVVDSASDGVSEFFCNYVPHLNEDVYFAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKDL
        MGLASDSVLVSVVDSASDGVSEFFCNYVPHLNEDVYFAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKDL
Subjt:  MGLASDSVLVSVVDSASDGVSEFFCNYVPHLNEDVYFAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKDL

Query:  SRNSRKA
        SRNSRKA
Subjt:  SRNSRKA

XP_004141282.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X2 [Cucumis sativus]2.8e-2794.29Show/hide
Query:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKDLSRNSRK
        F GMPLNFLGLGAGGGCGVGLGLGWGFGTA+GSKYRSSRMIFQGME DNKDQNQSYD KDSKDLSRNSRK
Subjt:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKDLSRNSRK

XP_022937244.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 [Cucurbita moschata]8.8e-2997.18Show/hide
Query:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKDLSRNSRKA
        F GMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYD KDSKDLSRNSRKA
Subjt:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKDLSRNSRKA

XP_022937247.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X2 [Cucurbita moschata]3.1e-2694.37Show/hide
Query:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKDLSRNSRKA
        F GMPLNFLGL  GGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYD KDSKDLSRNSRKA
Subjt:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKDLSRNSRKA

XP_022977146.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 [Cucurbita maxima]2.0e-2895.77Show/hide
Query:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKDLSRNSRKA
        F GMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQ+YD KDSKDLSRNSRKA
Subjt:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKDLSRNSRKA

TrEMBL top hitse value%identityAlignment
A0A0A0L0F8 Uncharacterized protein1.4e-2794.29Show/hide
Query:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKDLSRNSRK
        F GMPLNFLGLGAGGGCGVGLGLGWGFGTA+GSKYRSSRMIFQGME DNKDQNQSYD KDSKDLSRNSRK
Subjt:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKDLSRNSRK

A0A1S3BVF8 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X12.6e-2691.43Show/hide
Query:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKDLSRNSRK
        F GMPLNFLGLGAGGGCGVGLGLGWGFGTA+GSKYRSSRMIFQGME D+KDQNQSYD KDSKD SRNSRK
Subjt:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKDLSRNSRK

A0A6J1F9U6 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X14.3e-2997.18Show/hide
Query:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKDLSRNSRKA
        F GMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYD KDSKDLSRNSRKA
Subjt:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKDLSRNSRKA

A0A6J1FAN4 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X21.5e-2694.37Show/hide
Query:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKDLSRNSRKA
        F GMPLNFLGL  GGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYD KDSKDLSRNSRKA
Subjt:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKDLSRNSRKA

A0A6J1IHM9 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X19.5e-2995.77Show/hide
Query:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKDLSRNSRKA
        F GMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQ+YD KDSKDLSRNSRKA
Subjt:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKDLSRNSRKA

SwissProt top hitse value%identityAlignment
Q8VY77 Protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic5.2e-1665.08Show/hide
Query:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKD
        F GMP+N LG+GAGGGCGVGLGLGWGFGTA+GS YRSSR+ FQG+EL+  D+ +      SK+
Subjt:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKD

Arabidopsis top hitse value%identityAlignment
AT1G27695.1 glycine-rich protein3.7e-1765.08Show/hide
Query:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKD
        F GMP+N LG+GAGGGCGVGLGLGWGFGTA+GS YRSSR+ FQG+EL+  D+ +      SK+
Subjt:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKD

AT1G27695.2 glycine-rich protein3.7e-1765.08Show/hide
Query:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKD
        F GMP+N LG+GAGGGCGVGLGLGWGFGTA+GS YRSSR+ FQG+EL+  D+ +      SK+
Subjt:  FAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCTGGCGTCGGATTCGGTTTTGGTATCGGTTGTGGATTCGGCATCGGATGGGGTTTCGGAGTTTTTCTGCAATTACGTGCCCCACCTGAATGAAGATGTTTATTT
TGCAGGAATGCCTTTGAACTTCTTGGGCCTTGGTGCGGGTGGTGGGTGTGGTGTTGGATTGGGACTTGGATGGGGATTTGGCACAGCTTACGGGAGTAAGTATCGGTCCT
CAAGGATGATATTTCAGGGAATGGAACTTGACAACAAGGATCAAAATCAAAGTTATGACTGCAAGGACTCAAAAGACTTGTCCAGAAATTCCAGAAAAGCTTGA
mRNA sequenceShow/hide mRNA sequence
TTCTTTTTTTCTTTGCTAAAAATTTTCGCTCCCCTTGTTCAATTCGTTCTCGATTCCACTCGTTACAAGCTTCTCCGTTTGTGGCGCCTCAGCTGCGAGCAATGGTACTC
ACCAACTTCAATGGGGCTGGCGTCGGATTCGGTTTTGGTATCGGTTGTGGATTCGGCATCGGATGGGGTTTCGGAGTTTTTCTGCAATTACGTGCCCCACCTGAATGAAG
ATGTTTATTTTGCAGGAATGCCTTTGAACTTCTTGGGCCTTGGTGCGGGTGGTGGGTGTGGTGTTGGATTGGGACTTGGATGGGGATTTGGCACAGCTTACGGGAGTAAG
TATCGGTCCTCAAGGATGATATTTCAGGGAATGGAACTTGACAACAAGGATCAAAATCAAAGTTATGACTGCAAGGACTCAAAAGACTTGTCCAGAAATTCCAGAAAAGC
TTGA
Protein sequenceShow/hide protein sequence
MGLASDSVLVSVVDSASDGVSEFFCNYVPHLNEDVYFAGMPLNFLGLGAGGGCGVGLGLGWGFGTAYGSKYRSSRMIFQGMELDNKDQNQSYDCKDSKDLSRNSRKA