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Carg21818 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21818
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPlant protein 1589 of unknown function
Genome locationCarg_Chr05:99774..109411
RNA-Seq ExpressionCarg21818
SyntenyCarg21818
Gene Ontology termsNA
InterPro domainsIPR006476 - Conserved hypothetical protein CHP01589, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029203.1 hypothetical protein SDJN02_07540, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-157100Show/hide
Query:  MVVKDGCQSEGEKPDGGEENNTDESRNKFRDCDGESNQMTRSMENYKFLSLFYDEKSGARHIEDSQENRPDQMGLGGKVLPLTRKTQATPASYYPPPLID
        MVVKDGCQSEGEKPDGGEENNTDESRNKFRDCDGESNQMTRSMENYKFLSLFYDEKSGARHIEDSQENRPDQMGLGGKVLPLTRKTQATPASYYPPPLID
Subjt:  MVVKDGCQSEGEKPDGGEENNTDESRNKFRDCDGESNQMTRSMENYKFLSLFYDEKSGARHIEDSQENRPDQMGLGGKVLPLTRKTQATPASYYPPPLID

Query:  KHIGPIGRDKRSRTNPDDLHWGLEHNLAVAHTSFVPVLFLLPIGLLLLQCLMGAVASDVDWRATGNRGDAAFCYVSVWAGLLLLRIEFCDSMNRSEVGTN
        KHIGPIGRDKRSRTNPDDLHWGLEHNLAVAHTSFVPVLFLLPIGLLLLQCLMGAVASDVDWRATGNRGDAAFCYVSVWAGLLLLRIEFCDSMNRSEVGTN
Subjt:  KHIGPIGRDKRSRTNPDDLHWGLEHNLAVAHTSFVPVLFLLPIGLLLLQCLMGAVASDVDWRATGNRGDAAFCYVSVWAGLLLLRIEFCDSMNRSEVGTN

Query:  IVRFICIMYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHTGPQYSF
        IVRFICIMYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHTGPQYSF
Subjt:  IVRFICIMYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHTGPQYSF

XP_022961647.1 uncharacterized protein LOC111462356 isoform X1 [Cucurbita moschata]7.9e-26100Show/hide
Query:  MYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT
        MYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT
Subjt:  MYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT

XP_022961648.1 uncharacterized protein LOC111462356 isoform X2 [Cucurbita moschata]7.9e-26100Show/hide
Query:  MYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT
        MYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT
Subjt:  MYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT

XP_022997625.1 uncharacterized protein LOC111492501 isoform X1 [Cucurbita maxima]3.9e-2598.25Show/hide
Query:  MYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT
        MYPYSHQFLPCFHCHPQAYIR VQHLIERCLLLHMSRDECVKALAHHANIRPLITHT
Subjt:  MYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT

XP_023545651.1 uncharacterized protein LOC111805022 [Cucurbita pepo subsp. pepo]7.9e-26100Show/hide
Query:  MYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT
        MYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT
Subjt:  MYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT

TrEMBL top hitse value%identityAlignment
A0A6J1BRT4 uncharacterized protein LOC1110051255.4e-2087.93Show/hide
Query:  MYPYSH-QFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT
        MY YSH QFLPCFHCHP AYIR VQHLIERCLLLHMS DEC KALAHHANIRPLIT T
Subjt:  MYPYSH-QFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT

A0A6J1HAR0 uncharacterized protein LOC111462356 isoform X13.8e-26100Show/hide
Query:  MYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT
        MYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT
Subjt:  MYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT

A0A6J1HCE7 uncharacterized protein LOC111462356 isoform X23.8e-26100Show/hide
Query:  MYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT
        MYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT
Subjt:  MYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT

A0A6J1K802 uncharacterized protein LOC111492501 isoform X21.9e-2598.25Show/hide
Query:  MYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT
        MYPYSHQFLPCFHCHPQAYIR VQHLIERCLLLHMSRDECVKALAHHANIRPLITHT
Subjt:  MYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT

A0A6J1KA89 uncharacterized protein LOC111492501 isoform X11.9e-2598.25Show/hide
Query:  MYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT
        MYPYSHQFLPCFHCHPQAYIR VQHLIERCLLLHMSRDECVKALAHHANIRPLITHT
Subjt:  MYPYSHQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10657.1 Plant protein 1589 of unknown function2.1e-1669.23Show/hide
Query:  HQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT
        H  LPC HC P +YIR VQH+IERC+LL M+RDECVKAL HHA+I PL+T T
Subjt:  HQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT

AT1G10657.2 Plant protein 1589 of unknown function2.1e-1669.23Show/hide
Query:  HQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT
        H  LPC HC P +YIR VQH+IERC+LL M+RDECVKAL HHA+I PL+T T
Subjt:  HQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT

AT1G10657.3 Plant protein 1589 of unknown function2.1e-1669.23Show/hide
Query:  HQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT
        H  LPC HC P +YIR VQH+IERC+LL M+RDECVKAL HHA+I PL+T T
Subjt:  HQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT

AT1G10657.4 Plant protein 1589 of unknown function2.1e-1669.23Show/hide
Query:  HQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT
        H  LPC HC P +YIR VQH+IERC+LL M+RDECVKAL HHA+I PL+T T
Subjt:  HQFLPCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT

AT3G55240.1 Plant protein 1589 of unknown function1.9e-0962.5Show/hide
Query:  AYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT
        +YI  VQH+IE+CL+ HMS++ECV+AL+ HANI P+IT T
Subjt:  AYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGTGAAGGACGGTTGCCAATCGGAGGGAGAGAAACCGGATGGAGGGGAGGAGAACAATACTGATGAGAGCCGGAACAAGTTCCGCGATTGCGATGGGGAGAGTAA
TCAGATGACGAGGTCAATGGAGAATTATAAGTTTCTGAGCTTATTCTATGATGAGAAATCTGGGGCACGGCACATTGAAGATTCTCAGGAGAATAGACCCGACCAAATGG
GTCTCGGTGGGAAGGTTCTGCCATTGACAAGAAAAACTCAAGCTACCCCTGCTTCCTACTACCCTCCTCCCCTAATCGACAAGCACATTGGCCCTATTGGCCGAGATAAG
AGAAGCAGGACAAACCCTGACGATCTCCACTGGGGCCTAGAACATAATCTTGCGGTTGCACATACTTCTTTTGTGCCAGTCCTATTTCTGTTGCCCATAGGTCTCCTTCT
CCTACAATGCCTGATGGGTGCTGTAGCTTCAGATGTAGACTGGAGGGCCACAGGAAATCGAGGCGATGCCGCTTTTTGTTATGTTTCTGTCTGGGCAGGGCTGTTGCTCC
TCAGAATAGAATTTTGTGATAGCATGAATAGAAGCGAAGTAGGAACGAATATAGTGAGATTTATATGTATTATGTACCCTTACAGCCACCAGTTTCTTCCCTGTTTTCAT
TGCCACCCCCAGGCCTATATCCGGAAGGTCCAACACCTGATAGAGAGATGCTTGCTGCTTCATATGAGTCGAGATGAGTGCGTGAAGGCATTGGCGCACCATGCAAACAT
TCGCCCTCTCATAACACATACAGGTCCACAATACTCTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGTGAAGGACGGTTGCCAATCGGAGGGAGAGAAACCGGATGGAGGGGAGGAGAACAATACTGATGAGAGCCGGAACAAGTTCCGCGATTGCGATGGGGAGAGTAA
TCAGATGACGAGGTCAATGGAGAATTATAAGTTTCTGAGCTTATTCTATGATGAGAAATCTGGGGCACGGCACATTGAAGATTCTCAGGAGAATAGACCCGACCAAATGG
GTCTCGGTGGGAAGGTTCTGCCATTGACAAGAAAAACTCAAGCTACCCCTGCTTCCTACTACCCTCCTCCCCTAATCGACAAGCACATTGGCCCTATTGGCCGAGATAAG
AGAAGCAGGACAAACCCTGACGATCTCCACTGGGGCCTAGAACATAATCTTGCGGTTGCACATACTTCTTTTGTGCCAGTCCTATTTCTGTTGCCCATAGGTCTCCTTCT
CCTACAATGCCTGATGGGTGCTGTAGCTTCAGATGTAGACTGGAGGGCCACAGGAAATCGAGGCGATGCCGCTTTTTGTTATGTTTCTGTCTGGGCAGGGCTGTTGCTCC
TCAGAATAGAATTTTGTGATAGCATGAATAGAAGCGAAGTAGGAACGAATATAGTGAGATTTATATGTATTATGTACCCTTACAGCCACCAGTTTCTTCCCTGTTTTCAT
TGCCACCCCCAGGCCTATATCCGGAAGGTCCAACACCTGATAGAGAGATGCTTGCTGCTTCATATGAGTCGAGATGAGTGCGTGAAGGCATTGGCGCACCATGCAAACAT
TCGCCCTCTCATAACACATACAGGTCCACAATACTCTTTTTAACTTTCTTCTTTTAAATCAAATTAATTGAGGTTTTGGGGTTTGTGTTTTGTGTTTTGTGTTTTGTGTT
TTGTGTTTTGTGGTTGCGCCTCACAGTGTGGAAAGAGCTTCAGAAAGAGAACCCCGAATTCTTCCGGGCATATTTCCGC
Protein sequenceShow/hide protein sequence
MVVKDGCQSEGEKPDGGEENNTDESRNKFRDCDGESNQMTRSMENYKFLSLFYDEKSGARHIEDSQENRPDQMGLGGKVLPLTRKTQATPASYYPPPLIDKHIGPIGRDK
RSRTNPDDLHWGLEHNLAVAHTSFVPVLFLLPIGLLLLQCLMGAVASDVDWRATGNRGDAAFCYVSVWAGLLLLRIEFCDSMNRSEVGTNIVRFICIMYPYSHQFLPCFH
CHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHTGPQYSF