; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg21832 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21832
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionocticosapeptide/Phox/Bem1p (PB1) domain-containing protein
Genome locationCarg_Chr05:176332..177770
RNA-Seq ExpressionCarg21832
SyntenyCarg21832
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000270 - PB1 domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598239.1 hypothetical protein SDJN03_08017, partial [Cucurbita argyrosperma subsp. sororia]3.6e-6985.06Show/hide
Query:  IMVFNFGVSESYTTDLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYAKRISPPSSMASFSSSLSS
        ++ FN  +S S   DLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSS KIRAFLFPPKYAKRISPPSS+ASFSSSLSS
Subjt:  IMVFNFGVSESYTTDLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYAKRISPPSSMASFSSSLSS

Query:  MSAAHRCFRRMSPPHASYLERSASAVPCSVYNIQGSSSRM------------NLGTSEILPRGWPRRLKLRAQM
        MSAAHRCFRRMSPPHASYLERSASAVPCSVYNIQGSSSR+            N GTSEILPRGWPRRLKLRAQM
Subjt:  MSAAHRCFRRMSPPHASYLERSASAVPCSVYNIQGSSSRM------------NLGTSEILPRGWPRRLKLRAQM

KAG7029217.1 hypothetical protein SDJN02_07554, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-156100Show/hide
Query:  GKGVPFRFNKNKNKNNAYDDTWADLPSTAPHSLSNLLPPSSSSAATAARFSLVIPTANSVITVAKPAFLLSTAPFPSLVTVFSLSPFHFPIDLIMVFNFG
        GKGVPFRFNKNKNKNNAYDDTWADLPSTAPHSLSNLLPPSSSSAATAARFSLVIPTANSVITVAKPAFLLSTAPFPSLVTVFSLSPFHFPIDLIMVFNFG
Subjt:  GKGVPFRFNKNKNKNNAYDDTWADLPSTAPHSLSNLLPPSSSSAATAARFSLVIPTANSVITVAKPAFLLSTAPFPSLVTVFSLSPFHFPIDLIMVFNFG

Query:  VSESYTTDLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYAKRISPPSSMASFSSSLSSMSAAHRC
        VSESYTTDLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYAKRISPPSSMASFSSSLSSMSAAHRC
Subjt:  VSESYTTDLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYAKRISPPSSMASFSSSLSSMSAAHRC

Query:  FRRMSPPHASYLERSASAVPCSVYNIQGSSSRMNLGTSEILPRGWPRRLKLRAQMMNCCGWGISLEWRRRDAGEFNKNLHKQRRQIFRKQ
        FRRMSPPHASYLERSASAVPCSVYNIQGSSSRMNLGTSEILPRGWPRRLKLRAQMMNCCGWGISLEWRRRDAGEFNKNLHKQRRQIFRKQ
Subjt:  FRRMSPPHASYLERSASAVPCSVYNIQGSSSRMNLGTSEILPRGWPRRLKLRAQMMNCCGWGISLEWRRRDAGEFNKNLHKQRRQIFRKQ

XP_022961752.1 uncharacterized protein LOC111462427 [Cucurbita moschata]2.4e-5789.51Show/hide
Query:  IMVFNFGVSESYTTDLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYAKRISPPSSMASF---SSS
        ++ FN  +S S   DLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSS KIRAFLFPPKYAKRISPPSSM SF   SSS
Subjt:  IMVFNFGVSESYTTDLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYAKRISPPSSMASF---SSS

Query:  LSSMSAAHRCFRRMSPPHASYLERSASAVPCSVYNIQGSSSRM
        LSSMSAAHRCFRRMSPPHASYLERSASAVPCSVYNIQGSSSRM
Subjt:  LSSMSAAHRCFRRMSPPHASYLERSASAVPCSVYNIQGSSSRM

XP_022996772.1 uncharacterized protein LOC111491906 [Cucurbita maxima]2.4e-5790.14Show/hide
Query:  IMVFNFGVSESYTTDLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYAKRISPPSSMASF--SSSL
        ++ FN  +S S   DLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSS KIRAFLFPPKYAKRISPPSSMASF  SSSL
Subjt:  IMVFNFGVSESYTTDLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYAKRISPPSSMASF--SSSL

Query:  SSMSAAHRCFRRMSPPHASYLERSASAVPCSVYNIQGSSSRM
        SSMSAAHRCFRRMSPPHASY ERSASAVPCSVYNIQGSSSRM
Subjt:  SSMSAAHRCFRRMSPPHASYLERSASAVPCSVYNIQGSSSRM

XP_023545453.1 uncharacterized protein LOC111804876 isoform X2 [Cucurbita pepo subsp. pepo]2.1e-6995.48Show/hide
Query:  SLSPFHFPIDLIMVFNFGVSESYTTDLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAA--SSSSSFKIRAFLFPPKYAKRISP
        SLS FHFPIDL+MVFNFGVSESYTTDLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAA  SSSSS KIRAFLFPPKYAKRISP
Subjt:  SLSPFHFPIDLIMVFNFGVSESYTTDLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAA--SSSSSFKIRAFLFPPKYAKRISP

Query:  PSSMASF--SSSLSSMSAAHRCFRRMSPPHASYLERSASAVPCSVYNIQGSSSRM
        PSSMASF  SSSLSSMSAAHRCFRRMSPPHASYLERSASAVPCSVYNIQGSSSRM
Subjt:  PSSMASF--SSSLSSMSAAHRCFRRMSPPHASYLERSASAVPCSVYNIQGSSSRM

TrEMBL top hitse value%identityAlignment
A0A0A0LKJ2 PB1 domain-containing protein2.1e-4680.62Show/hide
Query:  TDLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYAKRISPPSSMASFSSSLSSMSAAHRCFRRMSP
        ++LLLKFGELCGTS SVSFRCQLP+EDLDALVS+TSDEDLANLIEEYDRAAS SSS KIRAFL PPKYAKRISPPSSM SFSSS+     AHRCFRRMSP
Subjt:  TDLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYAKRISPPSSMASFSSSLSSMSAAHRCFRRMSP

Query:  PHASYLERSASAVPCSVYNIQGSSSRMNL
        P  SYLERS+SAVP SVYNIQGS +  ++
Subjt:  PHASYLERSASAVPCSVYNIQGSSSRMNL

A0A5A7V149 Octicosapeptide/Phox/Bem1p family protein isoform 17.2e-4778.2Show/hide
Query:  ESYTTDLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYAKRISPPSSMASFSSSLSSMSAAHRCFR
        +S   +LLLKFGELCGTSISV+FRCQLP+EDLDALVS+TSDEDLANLIEEYDRAAS SSS KIRAFL PPKY KRISPPSSM SFSSS+     AHRCFR
Subjt:  ESYTTDLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYAKRISPPSSMASFSSSLSSMSAAHRCFR

Query:  RMSPPHASYLERSASAVPCSVYNIQGSSSRMNL
        RMSPP+ASYLERSAS+VP  VYNIQGS +  ++
Subjt:  RMSPPHASYLERSASAVPCSVYNIQGSSSRMNL

A0A6J1BRT0 uncharacterized protein LOC1110051212.7e-3370.23Show/hide
Query:  TDLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAAS--SSSSFKIRAFLFPPK-YAKRISPPSSMASFSSSLSSMSAAHRCFRR
        T+LL KFG+LCGTS+ VSFRCQLP+EDLDALVSITSDEDLANLIEEYDRAAS  SS +FKIRAFL PPK Y K ISPP S  S SSS SSMS  HRC R 
Subjt:  TDLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAAS--SSSSFKIRAFLFPPK-YAKRISPPSSMASFSSSLSSMSAAHRCFRR

Query:  MS-PPHASYLERSASAVPCSVYNIQGSSSRM
        +S P H SY ERS S VP  + N+ G+S R+
Subjt:  MS-PPHASYLERSASAVPCSVYNIQGSSSRM

A0A6J1HAZ2 uncharacterized protein LOC1114624271.2e-5789.51Show/hide
Query:  IMVFNFGVSESYTTDLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYAKRISPPSSMASF---SSS
        ++ FN  +S S   DLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSS KIRAFLFPPKYAKRISPPSSM SF   SSS
Subjt:  IMVFNFGVSESYTTDLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYAKRISPPSSMASF---SSS

Query:  LSSMSAAHRCFRRMSPPHASYLERSASAVPCSVYNIQGSSSRM
        LSSMSAAHRCFRRMSPPHASYLERSASAVPCSVYNIQGSSSRM
Subjt:  LSSMSAAHRCFRRMSPPHASYLERSASAVPCSVYNIQGSSSRM

A0A6J1K2Y4 uncharacterized protein LOC1114919061.2e-5790.14Show/hide
Query:  IMVFNFGVSESYTTDLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYAKRISPPSSMASF--SSSL
        ++ FN  +S S   DLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSS KIRAFLFPPKYAKRISPPSSMASF  SSSL
Subjt:  IMVFNFGVSESYTTDLLLKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYAKRISPPSSMASF--SSSL

Query:  SSMSAAHRCFRRMSPPHASYLERSASAVPCSVYNIQGSSSRM
        SSMSAAHRCFRRMSPPHASY ERSASAVPCSVYNIQGSSSRM
Subjt:  SSMSAAHRCFRRMSPPHASYLERSASAVPCSVYNIQGSSSRM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G26510.1 Octicosapeptide/Phox/Bem1p family protein1.2e-1754.46Show/hide
Query:  TDLLLKFGELC---GTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYA---KRISPP-----SSMASFSSSLSSMS
        ++L  K  E+C   G SI+V+ RCQLP EDLDALVSITSDEDL NLIEEYD   SSSS  KIR FL PPK A   K+  PP     S+  S SS+ SS S
Subjt:  TDLLLKFGELC---GTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYA---KRISPP-----SSMASFSSSLSSMS

Query:  AAHRCFRRMSPP
        ++ R      PP
Subjt:  AAHRCFRRMSPP

AT3G26510.2 Octicosapeptide/Phox/Bem1p family protein1.2e-1754.46Show/hide
Query:  TDLLLKFGELC---GTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYA---KRISPP-----SSMASFSSSLSSMS
        ++L  K  E+C   G SI+V+ RCQLP EDLDALVSITSDEDL NLIEEYD   SSSS  KIR FL PPK A   K+  PP     S+  S SS+ SS S
Subjt:  TDLLLKFGELC---GTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYA---KRISPP-----SSMASFSSSLSSMS

Query:  AAHRCFRRMSPP
        ++ R      PP
Subjt:  AAHRCFRRMSPP

AT3G26510.3 Octicosapeptide/Phox/Bem1p family protein1.2e-1754.46Show/hide
Query:  TDLLLKFGELC---GTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYA---KRISPP-----SSMASFSSSLSSMS
        ++L  K  E+C   G SI+V+ RCQLP EDLDALVSITSDEDL NLIEEYD   SSSS  KIR FL PPK A   K+  PP     S+  S SS+ SS S
Subjt:  TDLLLKFGELC---GTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYA---KRISPP-----SSMASFSSSLSSMS

Query:  AAHRCFRRMSPP
        ++ R      PP
Subjt:  AAHRCFRRMSPP

AT3G26510.4 Octicosapeptide/Phox/Bem1p family protein1.2e-1754.46Show/hide
Query:  TDLLLKFGELC---GTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYA---KRISPP-----SSMASFSSSLSSMS
        ++L  K  E+C   G SI+V+ RCQLP EDLDALVSITSDEDL NLIEEYD   SSSS  KIR FL PPK A   K+  PP     S+  S SS+ SS S
Subjt:  TDLLLKFGELC---GTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYA---KRISPP-----SSMASFSSSLSSMS

Query:  AAHRCFRRMSPP
        ++ R      PP
Subjt:  AAHRCFRRMSPP

AT3G26510.5 Octicosapeptide/Phox/Bem1p family protein2.3e-2143.75Show/hide
Query:  AARFSLVIPTANSVITVAKPAFLLSTAPFPSLVTVFSLSPFHFPIDL-----IMVFNFGVSESYT---------------TDLLLKFGELC---GTSISV
        AA+  LVIPT NSV TV      L+++PF        L+P HFP+       + + NF   ++ +               T+L  K  E+C   G SI+V
Subjt:  AARFSLVIPTANSVITVAKPAFLLSTAPFPSLVTVFSLSPFHFPIDL-----IMVFNFGVSESYT---------------TDLLLKFGELC---GTSISV

Query:  SFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYA---KRISPP-----SSMASFSSSLSSMSAAHRCFRRMSPP
        + RCQLP EDLDALVSITSDEDL NLIEEYD   SSSS  KIR FL PPK A   K+  PP     S+  S SS+ SS S++ R      PP
Subjt:  SFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYA---KRISPP-----SSMASFSSSLSSMSAAHRCFRRMSPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAAAGGGTGTTCCGTTCCGGTTCAACAAGAACAAGAACAAGAACAACGCATACGACGACACATGGGCAGACCTCCCCTCCACCGCACCGCACTCACTTTCAAACCTACT
CCCACCATCAAGTTCCTCTGCAGCTACGGCGGCAAGATTCTCCCTCGTTATCCCGACGGCGAACTCCGTTATCACGGTGGCGAAACCCGCCTTCTTGCTTTCAACCGCTC
CATTTCCTTCTCTGGTAACCGTCTTTTCTCTCTCTCCCTTCCACTTTCCGATTGATTTGATTATGGTTTTTAACTTCGGAGTTTCTGAATCTTACACCACAGATCTTCTG
TTGAAGTTCGGGGAGCTCTGCGGAACATCAATTTCTGTGAGCTTTCGTTGCCAATTGCCTAAGGAAGATCTGGATGCTCTAGTCTCCATCACCTCCGATGAAGATCTCGC
CAATCTCATCGAGGAATACGATCGGGCGGCTTCCTCTTCCTCGTCGTTCAAGATCAGAGCATTCCTTTTCCCTCCTAAATATGCCAAGAGAATCTCGCCTCCTTCTTCAA
TGGCCTCCTTCTCCTCCTCCTTGTCCTCGATGTCGGCGGCTCACCGTTGCTTTCGTCGGATGTCGCCGCCACATGCTTCCTACTTGGAGAGATCTGCATCTGCGGTTCCT
TGCAGTGTATATAATATTCAGGGAAGCTCTAGCCGCATGAATTTGGGCACGAGTGAGATTCTGCCTCGCGGTTGGCCTCGGAGATTAAAGCTGCGGGCACAAATGATGAA
TTGCTGCGGCTGGGGAATCTCCTTAGAATGGCGGAGGAGGGATGCAGGTGAATTTAATAAGAATCTCCATAAACAAAGAAGGCAAATATTCAGGAAACAATAA
mRNA sequenceShow/hide mRNA sequence
GGAAAGGGTGTTCCGTTCCGGTTCAACAAGAACAAGAACAAGAACAACGCATACGACGACACATGGGCAGACCTCCCCTCCACCGCACCGCACTCACTTTCAAACCTACT
CCCACCATCAAGTTCCTCTGCAGCTACGGCGGCAAGATTCTCCCTCGTTATCCCGACGGCGAACTCCGTTATCACGGTGGCGAAACCCGCCTTCTTGCTTTCAACCGCTC
CATTTCCTTCTCTGGTAACCGTCTTTTCTCTCTCTCCCTTCCACTTTCCGATTGATTTGATTATGGTTTTTAACTTCGGAGTTTCTGAATCTTACACCACAGATCTTCTG
TTGAAGTTCGGGGAGCTCTGCGGAACATCAATTTCTGTGAGCTTTCGTTGCCAATTGCCTAAGGAAGATCTGGATGCTCTAGTCTCCATCACCTCCGATGAAGATCTCGC
CAATCTCATCGAGGAATACGATCGGGCGGCTTCCTCTTCCTCGTCGTTCAAGATCAGAGCATTCCTTTTCCCTCCTAAATATGCCAAGAGAATCTCGCCTCCTTCTTCAA
TGGCCTCCTTCTCCTCCTCCTTGTCCTCGATGTCGGCGGCTCACCGTTGCTTTCGTCGGATGTCGCCGCCACATGCTTCCTACTTGGAGAGATCTGCATCTGCGGTTCCT
TGCAGTGTATATAATATTCAGGGAAGCTCTAGCCGCATGAATTTGGGCACGAGTGAGATTCTGCCTCGCGGTTGGCCTCGGAGATTAAAGCTGCGGGCACAAATGATGAA
TTGCTGCGGCTGGGGAATCTCCTTAGAATGGCGGAGGAGGGATGCAGGTGAATTTAATAAGAATCTCCATAAACAAAGAAGGCAAATATTCAGGAAACAATAA
Protein sequenceShow/hide protein sequence
GKGVPFRFNKNKNKNNAYDDTWADLPSTAPHSLSNLLPPSSSSAATAARFSLVIPTANSVITVAKPAFLLSTAPFPSLVTVFSLSPFHFPIDLIMVFNFGVSESYTTDLL
LKFGELCGTSISVSFRCQLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSFKIRAFLFPPKYAKRISPPSSMASFSSSLSSMSAAHRCFRRMSPPHASYLERSASAVP
CSVYNIQGSSSRMNLGTSEILPRGWPRRLKLRAQMMNCCGWGISLEWRRRDAGEFNKNLHKQRRQIFRKQ