; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg21870 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21870
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionWD repeat-containing protein DWA2-like
Genome locationCarg_Chr05:8504075..8505198
RNA-Seq ExpressionCarg21870
SyntenyCarg21870
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR040323 - EARP and GARP complex-interacting protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599107.1 WD repeat-containing protein DWA2, partial [Cucurbita argyrosperma subsp. sororia]1.3e-38100Show/hide
Query:  SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR
        SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR
Subjt:  SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR

KAG7030045.1 WD repeat-containing protein DWA2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-43100Show/hide
Query:  MTQCRRLQSAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR
        MTQCRRLQSAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR
Subjt:  MTQCRRLQSAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR

XP_022946164.1 WD repeat-containing protein DWA2-like [Cucurbita moschata]3.8e-3898.75Show/hide
Query:  SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR
        SAGTDSAVNLWLASMTDGELKSERTIDSPRCP DPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR
Subjt:  SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR

XP_022999730.1 WD repeat-containing protein DWA2-like [Cucurbita maxima]1.3e-38100Show/hide
Query:  SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR
        SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR
Subjt:  SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR

XP_023547262.1 WD repeat-containing protein DWA2-like [Cucurbita pepo subsp. pepo]1.3e-38100Show/hide
Query:  SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR
        SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR
Subjt:  SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR

TrEMBL top hitse value%identityAlignment
A0A1S3CMG4 WD repeat-containing protein DWA2-like isoform X12.9e-3187.5Show/hide
Query:  SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR
        SAGTDSAVNLWLASM+D ELKSER +DS     DPLLHSYSDYEDSVYGLAWS REPWIFASLSYDGRVVVESVKPFLSR
Subjt:  SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR

A0A1S3CMK2 WD repeat-containing protein DWA2-like isoform X22.9e-3187.5Show/hide
Query:  SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR
        SAGTDSAVNLWLASM+D ELKSER +DS     DPLLHSYSDYEDSVYGLAWS REPWIFASLSYDGRVVVESVKPFLSR
Subjt:  SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR

A0A6J1DJW1 WD repeat-containing protein DWA21.3e-3187.5Show/hide
Query:  SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR
        SAGTDSAVNLWLA ++DGELKSERT+DS     DPLLHSYSDYEDSVYGLAWS REPWIFASLSYDGRVVVESVKPFLSR
Subjt:  SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR

A0A6J1G310 WD repeat-containing protein DWA2-like1.9e-3898.75Show/hide
Query:  SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR
        SAGTDSAVNLWLASMTDGELKSERTIDSPRCP DPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR
Subjt:  SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR

A0A6J1KGF3 WD repeat-containing protein DWA2-like6.4e-39100Show/hide
Query:  SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR
        SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR
Subjt:  SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR

SwissProt top hitse value%identityAlignment
Q3KPT3 EARP-interacting protein homolog1.1e-0856.1Show/hide
Query:  DPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESV
        D ++ +Y ++EDSVY + WSS +PW+FASLSYDGR+V+  V
Subjt:  DPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESV

Q5M8I4 EARP-interacting protein homolog1.5e-0856.1Show/hide
Query:  DPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESV
        D ++ +Y ++EDSVY + WSS +PW+FASLSYDGR+V+  V
Subjt:  DPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESV

Q6DUZ9 EARP-interacting protein homolog1.1e-0856.1Show/hide
Query:  DPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESV
        D ++ +Y ++EDSVY + WSS +PW+FASLSYDGR+V+  V
Subjt:  DPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESV

Q6NPN9 WD repeat-containing protein DWA21.1e-2772.5Show/hide
Query:  SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR
        S GTDSAVNLW AS +     SE  +++ R  V+PLL+SY+DYEDSVYGLAWSSREPWIFASLSYDGRVV+ESVKPFL R
Subjt:  SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR

Q9U1Q0 EARP-interacting protein 15.1e-0940.48Show/hide
Query:  LQSAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSD--------YEDSVYGLAWSSREPWIFASLSYDGRVVVESV
        L + G+D++V L  A     E + E   D      D L+    D        +EDSVY  AWSS +PW FASLSYDGR++V +V
Subjt:  LQSAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSD--------YEDSVYGLAWSSREPWIFASLSYDGRVVVESV

Arabidopsis top hitse value%identityAlignment
AT1G20540.1 Transducin/WD40 repeat-like superfamily protein7.7e-2972.84Show/hide
Query:  SAGTDSAVNLWLASMTDGELK-SERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR
        SAGTDS VNLW AS T  + K SE  ++S R  V+PLL+SY+DYEDSVYGLAWSSREPW+FASLSYDGRV++ESVKPFL R
Subjt:  SAGTDSAVNLWLASMTDGELK-SERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR

AT1G76260.1 DWD (DDB1-binding WD40 protein) hypersensitive to ABA 27.7e-2972.5Show/hide
Query:  SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR
        S GTDSAVNLW AS +     SE  +++ R  V+PLL+SY+DYEDSVYGLAWSSREPWIFASLSYDGRVV+ESVKPFL R
Subjt:  SAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACAATGTCGCCGATTGCAGAGTGCCGGTACTGATTCGGCTGTCAACTTATGGTTGGCATCCATGACTGATGGCGAACTAAAATCTGAAAGGACGATTGATTCACC
TCGATGTCCAGTTGATCCATTACTGCATTCTTACAGTGACTACGAAGACAGTGTTTATGGCCTTGCTTGGAGCTCTCGTGAGCCTTGGATCTTTGCTTCACTGTCCTATG
ATGGGAGGGTCGTTGTAGAATCAGTGAAGCCTTTTCTCTCGAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGACACAATGTCGCCGATTGCAGAGTGCCGGTACTGATTCGGCTGTCAACTTATGGTTGGCATCCATGACTGATGGCGAACTAAAATCTGAAAGGACGATTGATTCACC
TCGATGTCCAGTTGATCCATTACTGCATTCTTACAGTGACTACGAAGACAGTGTTTATGGCCTTGCTTGGAGCTCTCGTGAGCCTTGGATCTTTGCTTCACTGTCCTATG
ATGGGAGGGTCGTTGTAGAATCAGTGAAGCCTTTTCTCTCGAGATAATGAAGTTGATCATTTTAGTTTTTGTTTCTCAATATTCATTGCTTCCTCAGTTTGTCTCTGTTT
CATCAGCAAGAGTAGTTGTTCCTGAATTTAGTTCAAACAAAACCCCACTCGTCTTTACAACGGTATCGATGAGATTGAGATTGCTCGATGCTCGAGGACTTGTCCAGTAA
CAGAGAAAACATACACACTACTCAGGGAGTAATTTTATTGTACTGAAGATGAGCATAGCTGTTATGAACAATATGATTCGTTGTTTTGTTGTGTTGAACTTGCTCTACAA
CTAGTTCATATAGCTTAAACTTTCAACCAGAAAAGAAAAATAATGTTATATATACTTTGATTTCCTCTTGCTTC
Protein sequenceShow/hide protein sequence
MTQCRRLQSAGTDSAVNLWLASMTDGELKSERTIDSPRCPVDPLLHSYSDYEDSVYGLAWSSREPWIFASLSYDGRVVVESVKPFLSR