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Carg21903 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21903
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCLAVATA3/ESR (CLE)-related protein 25-like
Genome locationCarg_Chr05:8244816..8245822
RNA-Seq ExpressionCarg21903
SyntenyCarg21903
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
InterPro domainsIPR039316 - CLAVATA3/ESR (CLE)-related protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030012.1 CLAVATA3/ESR (CLE)-related protein 25 [Cucurbita argyrosperma subsp. argyrosperma]1.7e-50100Show/hide
Query:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTTTAAQFGGISKEMEVVGGHGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG
        MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTTTAAQFGGISKEMEVVGGHGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG
Subjt:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTTTAAQFGGISKEMEVVGGHGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG

Query:  KA
        KA
Subjt:  KA

XP_022946527.1 uncharacterized protein LOC111450563 [Cucurbita moschata]4.0e-4797.06Show/hide
Query:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTTTAAQFGGISKEMEVVGGHGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG
        MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGM  TTTTTAAQFGGISKEMEVVGG GGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG
Subjt:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTTTAAQFGGISKEMEVVGGHGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG

Query:  KA
        KA
Subjt:  KA

XP_022999782.1 uncharacterized protein LOC111494028 [Cucurbita maxima]3.8e-4594.12Show/hide
Query:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTTTAAQFGGISKEMEVVGGHGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG
        MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGM   TT TAAQFGGISKEMEVVGG GGKDVVRSEWHLNY+SKRRVPNGPDPIHNRRAGNSGRPPG
Subjt:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTTTAAQFGGISKEMEVVGGHGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG

Query:  KA
        KA
Subjt:  KA

XP_023521565.1 uncharacterized protein LOC111785387 [Cucurbita pepo subsp. pepo]9.9e-4695.1Show/hide
Query:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTTTAAQFGGISKEMEVVGGHGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG
        MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGM   T TTAAQFGGISKEMEVVGG GGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG
Subjt:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTTTAAQFGGISKEMEVVGGHGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG

Query:  KA
        KA
Subjt:  KA

XP_038886261.1 uncharacterized protein LOC120076488 [Benincasa hispida]7.6e-3072.48Show/hide
Query:  MSSYSPSCK---AMAVMGFIWLLLVNGSHQRGQSVATGM----TTTTTTTAAQFGGISKEMEVVGGHGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAG
        MS YSPSCK   ++AVM FI+LLLVNGSHQR Q VA  M     T T T  A+F GISKEM+VV G  GK VV  EWHLNYMSKRRVPNGPDPIHNRRAG
Subjt:  MSSYSPSCK---AMAVMGFIWLLLVNGSHQRGQSVATGM----TTTTTTTAAQFGGISKEMEVVGGHGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAG

Query:  NSGRPPGKA
        NSGRPPGKA
Subjt:  NSGRPPGKA

TrEMBL top hitse value%identityAlignment
A0A0A0KJ25 Uncharacterized protein2.7e-2564.15Show/hide
Query:  MSSYSPSCK--AMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTTTAAQFGGISKEMEVV--GGHGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSG
        M+ Y  SCK  ++ +M FIWLLL NGS QR + V  G    TT T  +  GISKE  V   GG GGK V   EWHLNYMSKRRVPNGPDPIHNRRAGNSG
Subjt:  MSSYSPSCK--AMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTTTAAQFGGISKEMEVV--GGHGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSG

Query:  RPPGKA
        RPPGKA
Subjt:  RPPGKA

A0A1S3CMA2 uncharacterized protein LOC1035025972.8e-2264.29Show/hide
Query:  SCK--AMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTTTAAQFGGISKEMEVVGGHGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
        SCK  ++ VM FIWLLL NGS QR + V  G    TT    +F G+ K+  VV G GGK     EWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
Subjt:  SCK--AMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTTTAAQFGGISKEMEVVGGHGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA

A0A5A7TRB3 Clavata3/esr-related 26, putative isoform 12.8e-2264.29Show/hide
Query:  SCK--AMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTTTAAQFGGISKEMEVVGGHGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
        SCK  ++ VM FIWLLL NGS QR + V  G    TT    +F G+ K+  VV G GGK     EWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
Subjt:  SCK--AMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTTTAAQFGGISKEMEVVGGHGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA

A0A6J1G3Y8 uncharacterized protein LOC1114505631.9e-4797.06Show/hide
Query:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTTTAAQFGGISKEMEVVGGHGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG
        MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGM  TTTTTAAQFGGISKEMEVVGG GGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG
Subjt:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTTTAAQFGGISKEMEVVGGHGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG

Query:  KA
        KA
Subjt:  KA

A0A6J1KBR7 uncharacterized protein LOC1114940281.8e-4594.12Show/hide
Query:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTTTAAQFGGISKEMEVVGGHGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG
        MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGM   TT TAAQFGGISKEMEVVGG GGKDVVRSEWHLNY+SKRRVPNGPDPIHNRRAGNSGRPPG
Subjt:  MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTTTAAQFGGISKEMEVVGGHGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG

Query:  KA
        KA
Subjt:  KA

SwissProt top hitse value%identityAlignment
Q8LFL4 CLAVATA3/ESR (CLE)-related protein 251.1e-0463.16Show/hide
Query:  GKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPP
        GKDV     +L ++SKR+VPNGPDPIHNR+A  S RPP
Subjt:  GKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPP

Arabidopsis top hitse value%identityAlignment
AT1G69970.2 CLAVATA3/ESR-RELATED 265.6e-0735.71Show/hide
Query:  KAMAVMGFIWLLLVNG---SHQRGQSVATGMTTTTTTTAAQFGGISKEMEVVGGHGGKDVVRSEWHLNYM-SKRRVPNGPDPIHNRRAGNSGRPPGKA
        + +  +G + LL+++     + +       +TT      +    I +E+E        D  R++  L+Y+ SKR+VP GPDPIHNRRAGNS RPPG+A
Subjt:  KAMAVMGFIWLLLVNG---SHQRGQSVATGMTTTTTTTAAQFGGISKEMEVVGGHGGKDVVRSEWHLNYM-SKRRVPNGPDPIHNRRAGNSGRPPGKA

AT3G28455.1 CLAVATA3/ESR-RELATED 258.1e-0663.16Show/hide
Query:  GKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPP
        GKDV     +L ++SKR+VPNGPDPIHNR+A  S RPP
Subjt:  GKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCTTATTCTCCTTCTTGTAAGGCCATGGCTGTTATGGGGTTTATTTGGCTTTTGTTAGTGAATGGTTCCCATCAACGGGGACAATCGGTGGCAACCGGGATGAC
GACGACAACGACAACAACGGCAGCTCAATTCGGGGGAATTTCTAAAGAGATGGAGGTGGTCGGTGGTCATGGTGGCAAGGACGTTGTTCGTTCAGAATGGCATCTCAACT
ACATGAGTAAAAGAAGAGTTCCTAATGGCCCTGATCCTATTCATAACAGGAGAGCAGGAAACTCTGGAAGACCACCCGGCAAGGCTTAA
mRNA sequenceShow/hide mRNA sequence
CATGTTGTTCAAGCTTTAAGAGCATAATATTGTCTAGAGAGAGAGGAAATGAGTTCTTATTCTCCTTCTTGTAAGGCCATGGCTGTTATGGGGTTTATTTGGCTTTTGTT
AGTGAATGGTTCCCATCAACGGGGACAATCGGTGGCAACCGGGATGACGACGACAACGACAACAACGGCAGCTCAATTCGGGGGAATTTCTAAAGAGATGGAGGTGGTCG
GTGGTCATGGTGGCAAGGACGTTGTTCGTTCAGAATGGCATCTCAACTACATGAGTAAAAGAAGAGTTCCTAATGGCCCTGATCCTATTCATAACAGGAGAGCAGGAAAC
TCTGGAAGACCACCCGGCAAGGCTTAACCTCGGGAATGAAACTGGGCTTTCAAGATGACACAAGATTGCACGATCAGCTATCTTGTATGTGTTACTTTAGGAATGAATGA
TGAAAACTTATCAGATCAATTCTCGGTTAGAATTTAGGACTCGTTTGATAATATTTTTGTTTTTTATTTTTAAATTTTAAAGTTTATGTGTATTTATC
Protein sequenceShow/hide protein sequence
MSSYSPSCKAMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTTTAAQFGGISKEMEVVGGHGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA