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Carg21907 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21907
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr05:8206206..8211058
RNA-Seq ExpressionCarg21907
SyntenyCarg21907
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030008.1 hypothetical protein SDJN02_08354, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-138100Show/hide
Query:  MSMRDSLRVSSIVCKQYFERYRNVAWTMPIRLPKVPLPRLYKRNVPNPAALRVKHSRDEFSDRIVLRRNRSGRAGDVSIDVTEGAFSSEHFDSNLSNFGE
        MSMRDSLRVSSIVCKQYFERYRNVAWTMPIRLPKVPLPRLYKRNVPNPAALRVKHSRDEFSDRIVLRRNRSGRAGDVSIDVTEGAFSSEHFDSNLSNFGE
Subjt:  MSMRDSLRVSSIVCKQYFERYRNVAWTMPIRLPKVPLPRLYKRNVPNPAALRVKHSRDEFSDRIVLRRNRSGRAGDVSIDVTEGAFSSEHFDSNLSNFGE

Query:  PVVLRQSTAHTTKSQISPFPRTSLSQSLQSASISRKAPETDRETIRYTCAFSRVSPSSVKISSRACWRQKLSLSRSTDRCSLLFHSLCSGSRLDVFLGVS
        PVVLRQSTAHTTKSQISPFPRTSLSQSLQSASISRKAPETDRETIRYTCAFSRVSPSSVKISSRACWRQKLSLSRSTDRCSLLFHSLCSGSRLDVFLGVS
Subjt:  PVVLRQSTAHTTKSQISPFPRTSLSQSLQSASISRKAPETDRETIRYTCAFSRVSPSSVKISSRACWRQKLSLSRSTDRCSLLFHSLCSGSRLDVFLGVS

Query:  DLFCGNILDAARGSNSSASNDAFASSAICCGSVSASRTIFVADPSRFISFSTELDRAVMSKL
        DLFCGNILDAARGSNSSASNDAFASSAICCGSVSASRTIFVADPSRFISFSTELDRAVMSKL
Subjt:  DLFCGNILDAARGSNSSASNDAFASSAICCGSVSASRTIFVADPSRFISFSTELDRAVMSKL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATGCGGGATTCTCTTAGAGTGTCCAGCATCGTGTGCAAGCAATACTTCGAACGCTATAGGAATGTTGCGTGGACTATGCCAATTAGACTCCCCAAAGTGCCTCT
GCCGCGCCTCTATAAGCGGAATGTGCCTAACCCTGCTGCACTCAGAGTGAAACACTCGCGGGATGAGTTTTCTGATCGAATTGTTCTTCGAAGAAACAGAAGCGGTCGGG
CTGGTGACGTCTCGATCGATGTTACCGAAGGAGCCTTTTCCAGTGAGCATTTTGATAGCAATCTGAGCAACTTCGGCGAACCAGTCGTCCTCCGGCAAAGCACTGCCCAC
ACAACAAAGTCGCAAATCTCTCCCTTCCCACGAACATCTCTGTCGCAATCCCTGCAATCAGCGTCAATTTCGCGAAAAGCGCCTGAAACCGACCGGGAAACAATCAGGTA
CACCTGTGCATTCAGCCGCGTATCGCCGTCTTCCGTGAAGATCAGTTCTAGAGCATGTTGGCGGCAGAAGCTGTCCCTCAGTCGATCCACCGACCGCTGTAGTCTCCTCT
TCCACTCTCTCTGCTCCGGCAGCCGGCTCGATGTTTTCCTTGGCGTTTCTGATCTGTTCTGTGGAAATATCTTGGACGCCGCTCGAGGAAGCAACTCATCGGCCAGCAAT
GACGCGTTCGCTAGCAGCGCTATCTGTTGCGGTTCGGTCTCCGCCAGCCGTACGATCTTCGTCGCTGATCCTTCCAGATTCATCTCGTTTTCCACTGAACTTGACAGAGC
TGTTATGAGCAAATTG
mRNA sequenceShow/hide mRNA sequence
ATGTCAATGCGGGATTCTCTTAGAGTGTCCAGCATCGTGTGCAAGCAATACTTCGAACGCTATAGGAATGTTGCGTGGACTATGCCAATTAGACTCCCCAAAGTGCCTCT
GCCGCGCCTCTATAAGCGGAATGTGCCTAACCCTGCTGCACTCAGAGTGAAACACTCGCGGGATGAGTTTTCTGATCGAATTGTTCTTCGAAGAAACAGAAGCGGTCGGG
CTGGTGACGTCTCGATCGATGTTACCGAAGGAGCCTTTTCCAGTGAGCATTTTGATAGCAATCTGAGCAACTTCGGCGAACCAGTCGTCCTCCGGCAAAGCACTGCCCAC
ACAACAAAGTCGCAAATCTCTCCCTTCCCACGAACATCTCTGTCGCAATCCCTGCAATCAGCGTCAATTTCGCGAAAAGCGCCTGAAACCGACCGGGAAACAATCAGGTA
CACCTGTGCATTCAGCCGCGTATCGCCGTCTTCCGTGAAGATCAGTTCTAGAGCATGTTGGCGGCAGAAGCTGTCCCTCAGTCGATCCACCGACCGCTGTAGTCTCCTCT
TCCACTCTCTCTGCTCCGGCAGCCGGCTCGATGTTTTCCTTGGCGTTTCTGATCTGTTCTGTGGAAATATCTTGGACGCCGCTCGAGGAAGCAACTCATCGGCCAGCAAT
GACGCGTTCGCTAGCAGCGCTATCTGTTGCGGTTCGGTCTCCGCCAGCCGTACGATCTTCGTCGCTGATCCTTCCAGATTCATCTCGTTTTCCACTGAACTTGACAGAGC
TGTTATGAGCAAATTG
Protein sequenceShow/hide protein sequence
MSMRDSLRVSSIVCKQYFERYRNVAWTMPIRLPKVPLPRLYKRNVPNPAALRVKHSRDEFSDRIVLRRNRSGRAGDVSIDVTEGAFSSEHFDSNLSNFGEPVVLRQSTAH
TTKSQISPFPRTSLSQSLQSASISRKAPETDRETIRYTCAFSRVSPSSVKISSRACWRQKLSLSRSTDRCSLLFHSLCSGSRLDVFLGVSDLFCGNILDAARGSNSSASN
DAFASSAICCGSVSASRTIFVADPSRFISFSTELDRAVMSKL