; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg21928 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg21928
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionBEST Arabidopsis thaliana protein match is: FRIGIDA interacting protein 1 .
Genome locationCarg_Chr11:3319269..3324832
RNA-Seq ExpressionCarg21928
SyntenyCarg21928
Gene Ontology termsGO:0005765 - lysosomal membrane (cellular component)
GO:0005770 - late endosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR029399 - TMEM192 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021969.1 Transmembrane protein [Cucurbita argyrosperma subsp. argyrosperma]1.8e-170100Show/hide
Query:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYCLVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRLQG
        MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYCLVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRLQG
Subjt:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYCLVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRLQG

Query:  YYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRYHD
        YYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRYHD
Subjt:  YYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRYHD

Query:  VGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEYVEENERLRAILGEWSTRAAKLERALEGERLSNN
        VGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEYVEENERLRAILGEWSTRAAKLERALEGERLSNN
Subjt:  VGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEYVEENERLRAILGEWSTRAAKLERALEGERLSNN

Query:  ELQRRISTLKKHQSSRGVDA
        ELQRRISTLKKHQSSRGVDA
Subjt:  ELQRRISTLKKHQSSRGVDA

XP_022933192.1 uncharacterized protein LOC111440041 isoform X1 [Cucurbita moschata]1.3e-16390.37Show/hide
Query:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYC--LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL
        MAAERHASSRA SSQDNAMFLDILHEAPLFGHRKPARTIGSIIYC  LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL
Subjt:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYC--LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL

Query:  QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY
        QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY
Subjt:  QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY

Query:  HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------Y
        HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE                               Y
Subjt:  HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------Y

Query:  VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQSSRGVDA
        VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQSSRGVDA
Subjt:  VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQSSRGVDA

XP_022967730.1 uncharacterized protein LOC111467166 isoform X1 [Cucurbita maxima]1.6e-16390.08Show/hide
Query:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYC--LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL
        MAAERHASSRA SSQDNAMFLDILHEAPLFGHRKPARTIGSIIYC  LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL
Subjt:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYC--LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL

Query:  QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY
        QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFM+IYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY
Subjt:  QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY

Query:  HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------Y
        HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE                               Y
Subjt:  HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------Y

Query:  VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQSSRGVDA
        VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQSSRGVDA
Subjt:  VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQSSRGVDA

XP_023530740.1 uncharacterized protein LOC111793195 [Cucurbita pepo subsp. pepo]4.8e-16389.8Show/hide
Query:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYC--LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL
        MAAERHASSRA SSQDNAMFLDILHEAPLFGHRKPARTIGSIIYC  LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL
Subjt:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYC--LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL

Query:  QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY
        QGYYSFSQKLKHIVRLPFAVTAYGTAALLLV+VWEPQISALSIPLILRMIMLIEAVCAGSFM+IYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY
Subjt:  QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY

Query:  HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------Y
        HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE                               Y
Subjt:  HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------Y

Query:  VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQSSRGVDA
        VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQSSRGVDA
Subjt:  VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQSSRGVDA

XP_038879093.1 protein FIP1-like isoform X1 [Benincasa hispida]9.0e-15486.92Show/hide
Query:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYC--LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL
        MAAERHASSRA SS+DNAMFLDILHEAPLFGHRKPART+GSIIYC  LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL
Subjt:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYC--LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL

Query:  QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY
        QGYYSFSQKLKHIVRLPFAV AYGTAALLLVMVWEPQISALSIP+ILR+IMLIEAVCAGSFM+IYISYVQKYNSLNSQPDVLKSLYSPLQQS+SLEDLRY
Subjt:  QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY

Query:  HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------Y
        HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE                               Y
Subjt:  HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------Y

Query:  VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKK
        VEENERLRAILGEWSTRAAKLERALE ER+SN ELQ+RISTLKK
Subjt:  VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKK

TrEMBL top hitse value%identityAlignment
A0A0A0M261 Uncharacterized protein1.1e-15286.05Show/hide
Query:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYC--LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL
        MAAERHASSRA SS+DNAMFLDILHEAPLFGHRKPART+GSIIYC  LVGYAALAIGAPWIFHPIKH VEPLLCSC VVLLMLTGIFQQYLVYQVHKIRL
Subjt:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYC--LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL

Query:  QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY
        QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVM WEPQISALSIP+ILR+IMLIEAVCAGSFM+IYISYVQKYNSLNSQPDVLKSLYSPLQQS+SLEDLRY
Subjt:  QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY

Query:  HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------Y
        HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE                               Y
Subjt:  HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------Y

Query:  VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKK
        VEENERLRAILGEWSTRAAKLERALE ER+SN ELQ++ISTLKK
Subjt:  VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKK

A0A1S3BRE8 uncharacterized protein LOC1034923695.7e-15486.92Show/hide
Query:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYC--LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL
        MAAERHASSRA SS+DNAMFLDILHEAPLFGHRKPART+GSIIYC  LVGYAALAIGAPWIFHPIKHLVEPLLCSC VVLLMLTGIFQQYLVYQVHKIRL
Subjt:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYC--LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL

Query:  QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY
        QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIP+ILR+IMLIEAVCAGSFM+IYISYVQKYNSLNSQPDVLKSLYSPLQQS+SLEDLRY
Subjt:  QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY

Query:  HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------Y
        HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE                               Y
Subjt:  HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------Y

Query:  VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKK
        VEENERLRAILGEWSTRAAKLERALE ER+SN ELQ+RISTLKK
Subjt:  VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKK

A0A5A7UKR5 Uncharacterized protein8.2e-15386.34Show/hide
Query:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYC--LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL
        MAAERHASSRA SS+DNAMFLDILHEAPLFGHRKPART+GSIIYC  L  YAALAIGAPWIFHPIKHLVEPLLCSC VVLLMLTGIFQQYLVYQVHKIRL
Subjt:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYC--LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL

Query:  QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY
        QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIP+ILR+IMLIEAVCAGSFM+IYISYVQKYNSLNSQPDVLKSLYSPLQQS+SLEDLRY
Subjt:  QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY

Query:  HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------Y
        HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE                               Y
Subjt:  HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------Y

Query:  VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKK
        VEENERLRAILGEWSTRAAKLERALE ER+SN ELQ+RISTLKK
Subjt:  VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKK

A0A6J1EZ32 uncharacterized protein LOC111440041 isoform X16.1e-16490.37Show/hide
Query:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYC--LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL
        MAAERHASSRA SSQDNAMFLDILHEAPLFGHRKPARTIGSIIYC  LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL
Subjt:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYC--LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL

Query:  QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY
        QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY
Subjt:  QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY

Query:  HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------Y
        HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE                               Y
Subjt:  HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------Y

Query:  VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQSSRGVDA
        VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQSSRGVDA
Subjt:  VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQSSRGVDA

A0A6J1HVA3 uncharacterized protein LOC111467166 isoform X17.9e-16490.08Show/hide
Query:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYC--LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL
        MAAERHASSRA SSQDNAMFLDILHEAPLFGHRKPARTIGSIIYC  LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL
Subjt:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYC--LVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL

Query:  QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY
        QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFM+IYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY
Subjt:  QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY

Query:  HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------Y
        HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE                               Y
Subjt:  HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------Y

Query:  VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQSSRGVDA
        VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQSSRGVDA
Subjt:  VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQSSRGVDA

SwissProt top hitse value%identityAlignment
Q8S8K9 Protein FIP12.8e-11364.74Show/hide
Query:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYCLV--GYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL
        M+ ER ASS   ++++NAMFLDILHEAPLFGHRK    +GS +Y L+  GYA LA GAPW+FH ++ L   LLC CDV LL++TG+FQQY VYQV KIRL
Subjt:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYCLV--GYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL

Query:  QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY
        QGYYSFSQKLKH+VRLPFA+ AYGTAA+LLV+VW PQI  LSI  + R+IML+EAV AG FM +YI YV +YNS+NS+PDVLKSLYSPLQ S+S+E LRY
Subjt:  QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY

Query:  HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------Y
        ++ GRLSDQQ ALLQYQRENLHFL+EEIL LQE LSKYE+S DGSTPQVDLAH+LAARDQELRTLSAE                               Y
Subjt:  HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------Y

Query:  VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQ
        +EENERLRAIL EWS RAA LERALE ER+SN+ELQ+ +++ ++ Q
Subjt:  VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQ

Arabidopsis top hitse value%identityAlignment
AT2G06005.1 FRIGIDA interacting protein 12.0e-11464.74Show/hide
Query:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYCLV--GYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL
        M+ ER ASS   ++++NAMFLDILHEAPLFGHRK    +GS +Y L+  GYA LA GAPW+FH ++ L   LLC CDV LL++TG+FQQY VYQV KIRL
Subjt:  MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYCLV--GYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRL

Query:  QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY
        QGYYSFSQKLKH+VRLPFA+ AYGTAA+LLV+VW PQI  LSI  + R+IML+EAV AG FM +YI YV +YNS+NS+PDVLKSLYSPLQ S+S+E LRY
Subjt:  QGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRY

Query:  HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------Y
        ++ GRLSDQQ ALLQYQRENLHFL+EEIL LQE LSKYE+S DGSTPQVDLAH+LAARDQELRTLSAE                               Y
Subjt:  HDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------Y

Query:  VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQ
        +EENERLRAIL EWS RAA LERALE ER+SN+ELQ+ +++ ++ Q
Subjt:  VEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQ

AT2G06005.2 FRIGIDA interacting protein 11.2e-8462.59Show/hide
Query:  IFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRLQGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGS
        +FH ++ L   LLC CDV LL++TG+FQQY VYQV KIRLQGYYSFSQKLKH+VRLPFA+ AYGTAA+LLV+VW PQI  LSI  + R+IML+EAV AG 
Subjt:  IFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRLQGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGS

Query:  FMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRYHDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQ
        FM +YI             DVLKSLYSPLQ S+S+E LRY++ GRLSDQQ ALLQYQRENLHFL+EEIL LQE LSKYE+S DGSTPQVDLAH+LAARDQ
Subjt:  FMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRYHDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQ

Query:  ELRTLSAE-------------------------------YVEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQ
        ELRTLSAE                               Y+EENERLRAIL EWS RAA LERALE ER+SN+ELQ+ +++ ++ Q
Subjt:  ELRTLSAE-------------------------------YVEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQ

AT5G20580.1 BEST Arabidopsis thaliana protein match is: FRIGIDA interacting protein 1 (TAIR:AT2G06005.1)1.5e-10662.21Show/hide
Query:  MAAERHASS-RAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYCLV--GYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIR
        MA +R ASS   ++ QDNAMFLDILHEAPLFGHR+    +GS IY ++   YA LA GAPWI   + +L+  LLCSC+V LLMLTG+FQQY V QV KIR
Subjt:  MAAERHASS-RAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYCLV--GYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIR

Query:  LQGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLR
        LQGYYSFSQKLKH+VRLPFA+ AYGTA++LL M W P +S L I  + R IM +EA+ A SFM++++ YV++YNS+NSQPDVL SLYSPLQ + +LE LR
Subjt:  LQGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLR

Query:  YHDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------
        YH+ GRLSDQQMALLQYQRENLH+L+EEILRLQE LSKYE ++  STPQVDLAH++A RDQELRTLSAE                               
Subjt:  YHDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------

Query:  YVEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLK
        YV ENERLRAILGEWS RAAKLERALE ER+SN EL++++S L+
Subjt:  YVEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLK

AT5G20580.2 BEST Arabidopsis thaliana protein match is: FRIGIDA interacting protein 1 (TAIR:AT2G06005.1)1.4e-10762.5Show/hide
Query:  MAAERHASS-RAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYCLV--GYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIR
        MA +R ASS   ++ QDNAMFLDILHEAPLFGHR+    +GS IY ++  GYA LA GAPWI   + +L+  LLCSC+V LLMLTG+FQQY V QV KIR
Subjt:  MAAERHASS-RAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYCLV--GYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIR

Query:  LQGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLR
        LQGYYSFSQKLKH+VRLPFA+ AYGTA++LL M W P +S L I  + R IM +EA+ A SFM++++ YV++YNS+NSQPDVL SLYSPLQ + +LE LR
Subjt:  LQGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLR

Query:  YHDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------
        YH+ GRLSDQQMALLQYQRENLH+L+EEILRLQE LSKYE ++  STPQVDLAH++A RDQELRTLSAE                               
Subjt:  YHDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAE-------------------------------

Query:  YVEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLK
        YV ENERLRAILGEWS RAAKLERALE ER+SN EL++++S L+
Subjt:  YVEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCGGAGAGGCACGCCTCTTCGCGCGCAGCATCATCTCAAGACAACGCGATGTTTCTTGATATACTGCATGAGGCCCCGTTATTTGGTCATCGGAAGCCTGCAAG
AACAATTGGGAGCATAATTTATTGTCTTGTTGGCTATGCTGCTCTGGCTATTGGAGCACCATGGATTTTTCATCCTATAAAGCACTTGGTTGAACCGTTGCTCTGCAGTT
GTGATGTTGTTCTGTTGATGCTCACAGGTATCTTTCAGCAGTATCTAGTATATCAAGTTCATAAAATTCGTTTGCAGGGTTATTATAGCTTTAGCCAGAAGTTAAAGCAT
ATTGTTCGTCTACCTTTCGCAGTTACTGCATATGGAACTGCTGCCCTTTTACTCGTCATGGTATGGGAACCTCAAATCAGTGCACTTTCGATTCCCCTAATTCTGAGGAT
GATTATGTTAATTGAAGCAGTATGTGCTGGATCGTTTATGGTTATATATATCAGTTATGTACAAAAGTACAATTCATTAAATTCTCAGCCTGATGTTTTGAAGTCATTGT
ATTCCCCACTTCAGCAATCAACTTCTTTGGAAGATCTAAGGTATCATGATGTCGGACGACTTTCTGATCAGCAAATGGCTCTGTTGCAATATCAGCGAGAGAACCTTCAT
TTTCTAAATGAGGAGATTCTTCGGTTGCAAGAGTGCTTAAGTAAATATGAACGGTCTAGCGATGGAAGCACTCCTCAGGTTGACCTTGCCCATATGCTAGCTGCTCGTGA
CCAGGAATTGAGGACACTTTCAGCTGAGTATGTAGAAGAAAATGAAAGACTGAGAGCTATTCTAGGAGAATGGAGTACACGAGCTGCTAAGCTTGAGAGAGCGCTTGAAG
GCGAGCGTTTATCAAATAATGAATTGCAAAGGAGGATTTCAACACTAAAAAAGCATCAGAGCAGCAGGGGAGTTGATGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATTCCGTTACGACCAAAAGATTCCTAATGCTGAAATTTGTTGCAGAAGAATCAGTCTCTCTCTCTCTCTCCCTCTGGAAAAATCACCGATCATCGAAATCTGAGAAGCAA
AATTGGCGGTAACGAAAAGCTTCCACTGCGCAATTCCGTGTCCAATTCTTCTTCCATCTCCGTTTAAGCATCTACAATCCAAACATGGCAGCGGAGAGGCACGCCTCTTC
GCGCGCAGCATCATCTCAAGACAACGCGATGTTTCTTGATATACTGCATGAGGCCCCGTTATTTGGTCATCGGAAGCCTGCAAGAACAATTGGGAGCATAATTTATTGTC
TTGTTGGCTATGCTGCTCTGGCTATTGGAGCACCATGGATTTTTCATCCTATAAAGCACTTGGTTGAACCGTTGCTCTGCAGTTGTGATGTTGTTCTGTTGATGCTCACA
GGTATCTTTCAGCAGTATCTAGTATATCAAGTTCATAAAATTCGTTTGCAGGGTTATTATAGCTTTAGCCAGAAGTTAAAGCATATTGTTCGTCTACCTTTCGCAGTTAC
TGCATATGGAACTGCTGCCCTTTTACTCGTCATGGTATGGGAACCTCAAATCAGTGCACTTTCGATTCCCCTAATTCTGAGGATGATTATGTTAATTGAAGCAGTATGTG
CTGGATCGTTTATGGTTATATATATCAGTTATGTACAAAAGTACAATTCATTAAATTCTCAGCCTGATGTTTTGAAGTCATTGTATTCCCCACTTCAGCAATCAACTTCT
TTGGAAGATCTAAGGTATCATGATGTCGGACGACTTTCTGATCAGCAAATGGCTCTGTTGCAATATCAGCGAGAGAACCTTCATTTTCTAAATGAGGAGATTCTTCGGTT
GCAAGAGTGCTTAAGTAAATATGAACGGTCTAGCGATGGAAGCACTCCTCAGGTTGACCTTGCCCATATGCTAGCTGCTCGTGACCAGGAATTGAGGACACTTTCAGCTG
AGTATGTAGAAGAAAATGAAAGACTGAGAGCTATTCTAGGAGAATGGAGTACACGAGCTGCTAAGCTTGAGAGAGCGCTTGAAGGCGAGCGTTTATCAAATAATGAATTG
CAAAGGAGGATTTCAACACTAAAAAAGCATCAGAGCAGCAGGGGAGTTGATGCCTAACCGCCTTCCACAGGGTAAATTTATTCTCCATTGAATATAGATTGAGCAGCAGC
AGATTAGACCGAGTTTTCTCCTGCGTTATGGTCTCCAACATTTGACCAAATGCAGGCAGCAGCTGTAAAGGAATGAAGGTTCGTTTTTTCTTTCTTTCTTTCATTCAAGA
TCCTTTAGATTTATTTTATTTTATTTTATCCTCCTCTCCTCTCTCTTTTGGACTCGCGAGTCATGACTAAGCATCAATTTCTTTGATTCCTCACGACACGAAATGACCAG
AAATTTATTGTAAAACTAGATAAATCAGGAATGAGCTATTTCAATGTTATTGGATAATCGTGTTGCTTTTTCATAAGTGAGGTGATGAAATAGAATGTGTGCTGATTTTA
T
Protein sequenceShow/hide protein sequence
MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYCLVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRLQGYYSFSQKLKH
IVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRYHDVGRLSDQQMALLQYQRENLH
FLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEYVEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQSSRGVDA