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Carg22047 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22047
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr19:6409481..6412440
RNA-Seq ExpressionCarg22047
SyntenyCarg22047
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571997.1 hypothetical protein SDJN03_28725, partial [Cucurbita argyrosperma subsp. sororia]2.1e-35100Show/hide
Query:  MATHLQSSTKMALHAPVLLALRVFVSLVSKTSKDIDVAEAQQEGVENIGPDYIAGFIKMKCSIERVNWSIGSYSTRRIMLR
        MATHLQSSTKMALHAPVLLALRVFVSLVSKTSKDIDVAEAQQEGVENIGPDYIAGFIKMKCSIERVNWSIGSYSTRRIMLR
Subjt:  MATHLQSSTKMALHAPVLLALRVFVSLVSKTSKDIDVAEAQQEGVENIGPDYIAGFIKMKCSIERVNWSIGSYSTRRIMLR
XP_023554289.1 uncharacterized protein LOC111811592 isoform X1 [Cucurbita pepo subsp. pepo]8.8e-0580.56Show/hide
Query:  APVLLALRVFVSLVSKTSKDIDVAEAQQEGVENIGP
        +P+L    VFVSLVSKTSKDID AEAQQEGVENIGP
Subjt:  APVLLALRVFVSLVSKTSKDIDVAEAQQEGVENIGP
XP_023554290.1 uncharacterized protein LOC111811592 isoform X2 [Cucurbita pepo subsp. pepo]2.0e-0978.26Show/hide
Query:  APVLLALRVFVSLVSKTSKDIDVAEAQQEGVENIGPDYIAGFIKMK
        +P+L    VFVSLVSKTSKDID AEAQQEGVENIGPDY+A F KMK
Subjt:  APVLLALRVFVSLVSKTSKDIDVAEAQQEGVENIGPDYIAGFIKMK
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGCACCTTCAAAGTTCCACTAAAATGGCCCTTCACGCTCCGGTTCTTCTAGCGCTCAGGGTCTTCGTTTCTCTGGTTTCGAAGACCTCGAAAGACATCGACGT
TGCTGAGGCACAACAAGAAGGCGTAGAGAACATTGGACCAGATTACATTGCAGGCTTCATCAAAATGAAGTGTTCGATCGAGCGGGTGAACTGGTCGATAGGTTCTTATA
GCACGAGACGGATTATGCTTCGGTGA
mRNA sequenceShow/hide mRNA sequence
TGCTAGCGTGATCCTCCCAGAATTTTTCAGAATTTGTGGCGGTTTATGGTGTCCGTGGACAAACCCTCCTTTCAATTGAGGCGCAGCGATGGCGACGCACCTTCAAAGTT
CCACTAAAATGGCCCTTCACGCTCCGGTTCTTCTAGCGCTCAGGGTCTTCGTTTCTCTGGTTTCGAAGACCTCGAAAGACATCGACGTTGCTGAGGCACAACAAGAAGGC
GTAGAGAACATTGGACCAGATTACATTGCAGGCTTCATCAAAATGAAGTGTTCGATCGAGCGGGTGAACTGGTCGATAGGTTCTTATAGCACGAGACGGATTATGCTTCG
GTGATGGACCTCCGAGATAAGCATTAAATGAAGTCTTAAAAAAATTGTGTATGTTTGAGAACAATCAAAATTTTAAAATCATGTCACCATAATTCATATTACCAAATTAC
CCCCAAAATAATGTTCGAATATCCCTATTGAT
Protein sequenceShow/hide protein sequence
MATHLQSSTKMALHAPVLLALRVFVSLVSKTSKDIDVAEAQQEGVENIGPDYIAGFIKMKCSIERVNWSIGSYSTRRIMLR