; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg22050 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22050
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontype IV secretion system protein virB10-like
Genome locationCarg_Chr19:6393965..6394357
RNA-Seq ExpressionCarg22050
SyntenyCarg22050
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571994.1 hypothetical protein SDJN03_28722, partial [Cucurbita argyrosperma subsp. sororia]1.7e-6397.69Show/hide
Query:  MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLDPPPPPPPPPHLRHPPPLDAVPVVE
        MSTPVDQLQPPPTAHSG+GSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLD  PPPPPPPHLRHPPPLDAVPVVE
Subjt:  MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLDPPPPPPPPPHLRHPPPLDAVPVVE

Query:  PLGGPPEIKQGADDKRENLQSAAPGTGGES
        PLGGPPEIKQGADDKRENLQSAAPGTGGES
Subjt:  PLGGPPEIKQGADDKRENLQSAAPGTGGES

KAG7011671.1 hypothetical protein SDJN02_26577, partial [Cucurbita argyrosperma subsp. argyrosperma]7.6e-67100Show/hide
Query:  MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLDPPPPPPPPPHLRHPPPLDAVPVVE
        MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLDPPPPPPPPPHLRHPPPLDAVPVVE
Subjt:  MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLDPPPPPPPPPHLRHPPPLDAVPVVE

Query:  PLGGPPEIKQGADDKRENLQSAAPGTGGES
        PLGGPPEIKQGADDKRENLQSAAPGTGGES
Subjt:  PLGGPPEIKQGADDKRENLQSAAPGTGGES

XP_008455516.1 PREDICTED: type IV secretion system protein virB10-like [Cucumis melo]3.5e-5688.06Show/hide
Query:  MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLD-PPPPPPPPPHLRHPPPLDAVPVV
        MSTP+DQLQPPP  HS H SVGP+IAVLAVISILGVIAG+IGRLCSGRPVFGYGAHYDVE+WVEKKCASCLDGSLD PPPPPPPPPHLRHPPPLD+VPV 
Subjt:  MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLD-PPPPPPPPPHLRHPPPLDAVPVV

Query:  EPLGG-PPEIKQG--ADDKRENLQSAAPGTGGES
        EPLGG PPEIKQG  AD K ENLQSAAPGTGGES
Subjt:  EPLGG-PPEIKQG--ADDKRENLQSAAPGTGGES

XP_022952791.1 uncharacterized protein LOC111455383 [Cucurbita moschata]1.5e-6297.66Show/hide
Query:  MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLDPPPPPPPPPHLRHPPPLDAVPVVE
        MSTPVDQLQPPPTAHSG+GSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLD  PPPPPPPHLRHPPPLDAVPVVE
Subjt:  MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLDPPPPPPPPPHLRHPPPLDAVPVVE

Query:  PLGGPPEIKQGADDKRENLQSAAPGTGG
        PLGGPPEIKQGADDKRENLQSAAPGTGG
Subjt:  PLGGPPEIKQGADDKRENLQSAAPGTGG

XP_022972364.1 uncharacterized protein LOC111470940 [Cucurbita maxima]1.1e-6095.31Show/hide
Query:  MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLDPPPPPPPPPHLRHPPPLDAVPVVE
        MSTP DQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLD   PPPPP HLRHPPPLDAVPVVE
Subjt:  MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLDPPPPPPPPPHLRHPPPLDAVPVVE

Query:  PLGGPPEIKQGADDKRENLQSAAPGTGG
        PLGGPPEIKQGAD+KRENLQSAAPGTGG
Subjt:  PLGGPPEIKQGADDKRENLQSAAPGTGG

TrEMBL top hitse value%identityAlignment
A0A0A0K6N4 Uncharacterized protein3.0e-5383.7Show/hide
Query:  MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLDPPPPPPPPPHLRHPPPLDAVPVVE
        MSTP+DQLQPPP  HS H SVGP+IAVLAVISILGVIAG+IGRLCSGRPVFGYGAHYD+E+WVEKKCASCLDGSLD   PPPPPPHLRHPPPLD+VPV E
Subjt:  MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLDPPPPPPPPPHLRHPPPLDAVPVVE

Query:  PLGG-PPEIKQG----ADDKRENLQSAAPGTGGES
        PLGG PPEIKQ     AD K ENLQSAAPGTGGES
Subjt:  PLGG-PPEIKQG----ADDKRENLQSAAPGTGGES

A0A1S3C1T9 type IV secretion system protein virB10-like1.7e-5688.06Show/hide
Query:  MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLD-PPPPPPPPPHLRHPPPLDAVPVV
        MSTP+DQLQPPP  HS H SVGP+IAVLAVISILGVIAG+IGRLCSGRPVFGYGAHYDVE+WVEKKCASCLDGSLD PPPPPPPPPHLRHPPPLD+VPV 
Subjt:  MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLD-PPPPPPPPPHLRHPPPLDAVPVV

Query:  EPLGG-PPEIKQG--ADDKRENLQSAAPGTGGES
        EPLGG PPEIKQG  AD K ENLQSAAPGTGGES
Subjt:  EPLGG-PPEIKQG--ADDKRENLQSAAPGTGGES

A0A5A7SPN0 Type IV secretion system protein virB10-like1.7e-5688.06Show/hide
Query:  MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLD-PPPPPPPPPHLRHPPPLDAVPVV
        MSTP+DQLQPPP  HS H SVGP+IAVLAVISILGVIAG+IGRLCSGRPVFGYGAHYDVE+WVEKKCASCLDGSLD PPPPPPPPPHLRHPPPLD+VPV 
Subjt:  MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLD-PPPPPPPPPHLRHPPPLDAVPVV

Query:  EPLGG-PPEIKQG--ADDKRENLQSAAPGTGGES
        EPLGG PPEIKQG  AD K ENLQSAAPGTGGES
Subjt:  EPLGG-PPEIKQG--ADDKRENLQSAAPGTGGES

A0A6J1GL66 uncharacterized protein LOC1114553837.2e-6397.66Show/hide
Query:  MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLDPPPPPPPPPHLRHPPPLDAVPVVE
        MSTPVDQLQPPPTAHSG+GSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLD  PPPPPPPHLRHPPPLDAVPVVE
Subjt:  MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLDPPPPPPPPPHLRHPPPLDAVPVVE

Query:  PLGGPPEIKQGADDKRENLQSAAPGTGG
        PLGGPPEIKQGADDKRENLQSAAPGTGG
Subjt:  PLGGPPEIKQGADDKRENLQSAAPGTGG

A0A6J1IBA8 uncharacterized protein LOC1114709405.1e-6195.31Show/hide
Query:  MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLDPPPPPPPPPHLRHPPPLDAVPVVE
        MSTP DQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLD   PPPPP HLRHPPPLDAVPVVE
Subjt:  MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLDPPPPPPPPPHLRHPPPLDAVPVVE

Query:  PLGGPPEIKQGADDKRENLQSAAPGTGG
        PLGGPPEIKQGAD+KRENLQSAAPGTGG
Subjt:  PLGGPPEIKQGADDKRENLQSAAPGTGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G26520.1 unknown protein6.1e-1443.62Show/hide
Query:  QPPP----------TAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLDPPPPPPPPPHLRHPPP
        QPPP           + +G+ ++GP IAV  V+++L V+A +IGRLCSG+ + GYG  YD+E W E +C SC+DG + P  P P P     PPP
Subjt:  QPPP----------TAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLDPPPPPPPPPHLRHPPP

AT3G57500.1 unknown protein2.7e-1448.78Show/hide
Query:  QPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDG-----SLDPPPPPPPPP
        Q  P+ +S H S+  ++ VLAVI+IL V+AG+  RLC GR +  +G  +D+E WVE+KC SC+D      S  P PPPPPPP
Subjt:  QPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDG-----SLDPPPPPPPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACTCCCGTCGACCAGCTCCAGCCCCCGCCGACCGCTCATTCCGGCCACGGCTCCGTCGGTCCAGTCATCGCCGTCCTCGCAGTCATTTCCATCCTCGGCGTCAT
CGCCGGCATTATCGGCCGTCTCTGCTCCGGCCGCCCCGTCTTCGGCTACGGCGCCCACTACGACGTCGAGGAATGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGCT
CCCTCGACCCTCCTCCTCCGCCGCCGCCGCCGCCGCATCTCCGCCACCCTCCGCCGCTCGATGCCGTTCCTGTAGTCGAACCCCTTGGTGGGCCGCCGGAAATCAAGCAA
GGCGCCGATGACAAACGCGAGAATTTGCAGTCGGCGGCTCCCGGAACCGGCGGTGAGTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCACTCCCGTCGACCAGCTCCAGCCCCCGCCGACCGCTCATTCCGGCCACGGCTCCGTCGGTCCAGTCATCGCCGTCCTCGCAGTCATTTCCATCCTCGGCGTCAT
CGCCGGCATTATCGGCCGTCTCTGCTCCGGCCGCCCCGTCTTCGGCTACGGCGCCCACTACGACGTCGAGGAATGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGCT
CCCTCGACCCTCCTCCTCCGCCGCCGCCGCCGCCGCATCTCCGCCACCCTCCGCCGCTCGATGCCGTTCCTGTAGTCGAACCCCTTGGTGGGCCGCCGGAAATCAAGCAA
GGCGCCGATGACAAACGCGAGAATTTGCAGTCGGCGGCTCCCGGAACCGGCGGTGAGTCGTGA
Protein sequenceShow/hide protein sequence
MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCLDGSLDPPPPPPPPPHLRHPPPLDAVPVVEPLGGPPEIKQ
GADDKRENLQSAAPGTGGES