; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg22070 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22070
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCold regulated protein 27, putative isoform 2
Genome locationCarg_Chr19:6259133..6261816
RNA-Seq ExpressionCarg22070
SyntenyCarg22070
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011651.1 hypothetical protein SDJN02_26557 [Cucurbita argyrosperma subsp. argyrosperma]6.0e-154100Show/hide
Query:  MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
Subjt:  MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI
        KMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI
Subjt:  KMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI

Query:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
        RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
Subjt:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ

XP_022952080.1 uncharacterized protein LOC111454842 isoform X1 [Cucurbita moschata]2.7e-13892.83Show/hide
Query:  MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMS PVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
Subjt:  MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI
        KMRRKPIMPNISSSE                   SMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI
Subjt:  KMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI

Query:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
        RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
Subjt:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ

XP_022952081.1 uncharacterized protein LOC111454842 isoform X2 [Cucurbita moschata]7.2e-13192.48Show/hide
Query:  MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMS PVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
Subjt:  MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI
        KMRRKPIMPNISSSE                   SMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI
Subjt:  KMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI

Query:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRV
        RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRV
Subjt:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRV

XP_022972372.1 uncharacterized protein LOC111470946 isoform X1 [Cucurbita maxima]2.5e-12887.46Show/hide
Query:  MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMS PVADRES MSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWT+EKHRLFLD+LEASFVQDLHRYRHLRA SSKQ
Subjt:  MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI
        KMRRKPIMPNISSSE                   SMVLQDASWQKAN+GRTDPLL KTADSPAILEDVWINHFPSAGNQ T ETTDVLEECGSCSDRSHI
Subjt:  KMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI

Query:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
        RNKTNS QSARSSQQIPPCCRDSHTIV EVSDQNFVDTHPGELS GTPITKRLKKASSDS GN+RVKLGIA D SLENQ
Subjt:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ

XP_023553838.1 uncharacterized protein LOC111811294 isoform X1 [Cucurbita pepo subsp. pepo]2.0e-12887.1Show/hide
Query:  MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMS PVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWT+EKHRLFLDSLEASFVQDLHRYRHLRA SSKQ
Subjt:  MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI
        K+RRK IMPNISSSE                   S+VLQDASWQKAN+GRTDPLL KTADSPAILEDVWINHFPSAG  CTLETTDVLEECGSCSDR HI
Subjt:  KMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI

Query:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
        RNKTNS QSARSSQQIP CCRDSHTI TEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGN+RVKLGIA D SLENQ
Subjt:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ

TrEMBL top hitse value%identityAlignment
A0A6J1GJA3 uncharacterized protein LOC111454842 isoform X23.5e-13192.48Show/hide
Query:  MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMS PVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
Subjt:  MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI
        KMRRKPIMPNISSSE                   SMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI
Subjt:  KMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI

Query:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRV
        RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRV
Subjt:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRV

A0A6J1GJF7 uncharacterized protein LOC111454842 isoform X31.1e-11381Show/hide
Query:  MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMS PVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
Subjt:  MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI
        KMRRKPIMPNISSSEVRQYIHSKSG                                                    NQCTLETTDVLEECGSCSDRSHI
Subjt:  KMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI

Query:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
        RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
Subjt:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ

A0A6J1GKR5 uncharacterized protein LOC111454842 isoform X11.3e-13892.83Show/hide
Query:  MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMS PVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
Subjt:  MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI
        KMRRKPIMPNISSSE                   SMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI
Subjt:  KMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI

Query:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
        RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
Subjt:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ

A0A6J1I4M4 uncharacterized protein LOC111470946 isoform X11.2e-12887.46Show/hide
Query:  MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMS PVADRES MSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWT+EKHRLFLD+LEASFVQDLHRYRHLRA SSKQ
Subjt:  MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI
        KMRRKPIMPNISSSE                   SMVLQDASWQKAN+GRTDPLL KTADSPAILEDVWINHFPSAGNQ T ETTDVLEECGSCSDRSHI
Subjt:  KMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI

Query:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
        RNKTNS QSARSSQQIPPCCRDSHTIV EVSDQNFVDTHPGELS GTPITKRLKKASSDS GN+RVKLGIA D SLENQ
Subjt:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ

A0A6J1I9R8 uncharacterized protein LOC111470946 isoform X22.3e-12287.59Show/hide
Query:  MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMS PVADRES MSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWT+EKHRLFLD+LEASFVQDLHRYRHLRA SSKQ
Subjt:  MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI
        KMRRKPIMPNISSSE                   SMVLQDASWQKAN+GRTDPLL KTADSPAILEDVWINHFPSAGNQ T ETTDVLEECGSCSDRSHI
Subjt:  KMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI

Query:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRV
        RNKTNS QSARSSQQIPPCCRDSHTIV EVSDQNFVDTHPGELS GTPITKRLKKASSDS GN+RV
Subjt:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRV

SwissProt top hitse value%identityAlignment
Q8L8T7 Cold-regulated protein 278.0e-0831.31Show/hide
Query:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSEVRQYIHSKSGSEFP
        R + +S  SS+   + EG+     S +    + ++T WT EKH L+L S+EASFV  L  Y  L AL   +         N+S S       ++ GS   
Subjt:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSEVRQYIHSKSGSEFP

Query:  ISFLYSMVLQDASWQKANVGRTDPLLD--KTADSPAILEDVWINHF-PSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTI
         S     VL D  WQK NV + +  ++     +S   L   WI H+ P    Q  +  TD  E        S+ +    S  SA S +Q+    RD   I
Subjt:  ISFLYSMVLQDASWQKANVGRTDPLLD--KTADSPAILEDVWINHF-PSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTI

Query:  ---VTEVSDQNFVD
             EVSDQNFV+
Subjt:  ---VTEVSDQNFVD

Arabidopsis top hitse value%identityAlignment
AT5G42900.1 cold regulated gene 275.7e-0931.31Show/hide
Query:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSEVRQYIHSKSGSEFP
        R + +S  SS+   + EG+     S +    + ++T WT EKH L+L S+EASFV  L  Y  L AL   +         N+S S       ++ GS   
Subjt:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSEVRQYIHSKSGSEFP

Query:  ISFLYSMVLQDASWQKANVGRTDPLLD--KTADSPAILEDVWINHF-PSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTI
         S     VL D  WQK NV + +  ++     +S   L   WI H+ P    Q  +  TD  E        S+ +    S  SA S +Q+    RD   I
Subjt:  ISFLYSMVLQDASWQKANVGRTDPLLD--KTADSPAILEDVWINHF-PSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTI

Query:  ---VTEVSDQNFVD
             EVSDQNFV+
Subjt:  ---VTEVSDQNFVD

AT5G42900.2 cold regulated gene 275.7e-0931.31Show/hide
Query:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSEVRQYIHSKSGSEFP
        R + +S  SS+   + EG+     S +    + ++T WT EKH L+L S+EASFV  L  Y  L AL   +         N+S S       ++ GS   
Subjt:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSEVRQYIHSKSGSEFP

Query:  ISFLYSMVLQDASWQKANVGRTDPLLD--KTADSPAILEDVWINHF-PSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTI
         S     VL D  WQK NV + +  ++     +S   L   WI H+ P    Q  +  TD  E        S+ +    S  SA S +Q+    RD   I
Subjt:  ISFLYSMVLQDASWQKANVGRTDPLLD--KTADSPAILEDVWINHF-PSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTI

Query:  ---VTEVSDQNFVD
             EVSDQNFV+
Subjt:  ---VTEVSDQNFVD

AT5G42900.3 cold regulated gene 274.3e-0931.46Show/hide
Query:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSEVRQYIHSKSGSEFP
        R + +S  SS+   + EG+     S +    + ++T WT EKH L+L S+EASFV  L  Y  L AL   +         N+S S       ++ GS   
Subjt:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSEVRQYIHSKSGSEFP

Query:  ISFLYSMVLQDASWQKANVGRTDPLLD--KTADSPAILEDVWINHF-PSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTI
         S     VL D  WQK NV + +  ++     +S   L   WI H+ P    Q  +  TD  E        S+ +    S  SA S +Q+    RD   I
Subjt:  ISFLYSMVLQDASWQKANVGRTDPLLD--KTADSPAILEDVWINHF-PSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTI

Query:  VT--EVSDQNFVD
            EVSDQNFV+
Subjt:  VT--EVSDQNFVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGACGCTCATACGCCGTCGTCCATGTCGACGCCGGTTGCAGATCGAGAATCACCCATGTCGGTCTCTGCTAGCGACTTGACTCGTTTGAACTCCGAATCCTACTC
TTCTTCCAATACCGTTGATGCGTCCGAGGGGGATTTGCCTTTGATGCCTTCTCATCATTGTTTTCAACTGGATGCGGTGCAAACACATTGGACAGAAGAGAAACACAGAT
TATTTCTTGATTCTTTAGAAGCATCTTTTGTCCAAGATTTGCATCGATATAGGCATCTTCGTGCTTTGTCCTCGAAACAGAAAATGCGTCGGAAGCCGATCATGCCTAAT
ATATCTTCTTCAGAGGTGAGGCAATACATCCACAGCAAGAGTGGGAGTGAGTTCCCTATATCATTCCTCTACTCGATGGTCCTTCAGGATGCCTCCTGGCAGAAGGCTAA
CGTTGGGAGAACTGATCCTTTATTGGATAAGACTGCCGATTCTCCCGCTATTTTAGAGGATGTATGGATAAATCATTTCCCTTCTGCAGGAAATCAGTGTACTCTGGAAA
CTACTGATGTTCTTGAAGAATGTGGAAGTTGTAGTGATAGGAGTCACATAAGAAACAAGACAAACTCCCGTCAATCTGCCAGAAGTTCTCAGCAGATTCCTCCATGCTGT
CGTGATTCTCATACAATCGTTACAGAAGTTTCAGATCAAAACTTTGTGGATACTCATCCAGGAGAGTTGTCTGATGGCACGCCCATTACAAAACGATTAAAGAAAGCTTC
CTCTGATTCTTCAGGCAACAACCGGGTAAAACTCGGGATTGCCATTGATTTCTCTTTGGAGAACCAATAA
mRNA sequenceShow/hide mRNA sequence
TCTCTCTCTCTCTCTCTCTCTCTTCGTATCTGCACGAGCCTGAATCCCGAGAGGGTTTCGGACCTAAATTTTCGCCCACGATTTCCATTTTTTCTTTGATTTGATTTTCT
ATATTTGGCTGTTCCGAACGATTTCGCTTTGTCTTTGATCTCCCGGAATGGTAGACGCTCATACGCCGTCGTCCATGTCGACGCCGGTTGCAGATCGAGAATCACCCATG
TCGGTCTCTGCTAGCGACTTGACTCGTTTGAACTCCGAATCCTACTCTTCTTCCAATACCGTTGATGCGTCCGAGGGGGATTTGCCTTTGATGCCTTCTCATCATTGTTT
TCAACTGGATGCGGTGCAAACACATTGGACAGAAGAGAAACACAGATTATTTCTTGATTCTTTAGAAGCATCTTTTGTCCAAGATTTGCATCGATATAGGCATCTTCGTG
CTTTGTCCTCGAAACAGAAAATGCGTCGGAAGCCGATCATGCCTAATATATCTTCTTCAGAGGTGAGGCAATACATCCACAGCAAGAGTGGGAGTGAGTTCCCTATATCA
TTCCTCTACTCGATGGTCCTTCAGGATGCCTCCTGGCAGAAGGCTAACGTTGGGAGAACTGATCCTTTATTGGATAAGACTGCCGATTCTCCCGCTATTTTAGAGGATGT
ATGGATAAATCATTTCCCTTCTGCAGGAAATCAGTGTACTCTGGAAACTACTGATGTTCTTGAAGAATGTGGAAGTTGTAGTGATAGGAGTCACATAAGAAACAAGACAA
ACTCCCGTCAATCTGCCAGAAGTTCTCAGCAGATTCCTCCATGCTGTCGTGATTCTCATACAATCGTTACAGAAGTTTCAGATCAAAACTTTGTGGATACTCATCCAGGA
GAGTTGTCTGATGGCACGCCCATTACAAAACGATTAAAGAAAGCTTCCTCTGATTCTTCAGGCAACAACCGGGTAAAACTCGGGATTGCCATTGATTTCTCTTTGGAGAA
CCAATAATTGCATTTTACAAATGATCCAAGACCGAATATGCTGCTATTTCATCTCTTAGGTTGCACCATATAAAAGATTATCATCAGAAAGATAAAAGCCAGATGCAAAA
ACTTTGTGCCTCC
Protein sequenceShow/hide protein sequence
MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPN
ISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCC
RDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ