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Carg22075 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22075
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr19:6228453..6228878
RNA-Seq ExpressionCarg22075
SyntenyCarg22075
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571966.1 hypothetical protein SDJN03_28694, partial [Cucurbita argyrosperma subsp. sororia]4.4e-3679.82Show/hide
Query:  MYGGDELENEDADLGQEPEVYKAQKQRNPFSILQCSFSCPPNRNPLIPISVLFSAVGSRTPTVYPFFSLPSPPLSFRLRNKPQKQTLVVVIVVVVVVRII
        MYGGDELENEDADLG                     FSCPPNRNPLIPISVLFSAVGSRTPT+YPFFSLPSPPLSFRLRNKPQKQTLVVVIVVVVVVRII
Subjt:  MYGGDELENEDADLGQEPEVYKAQKQRNPFSILQCSFSCPPNRNPLIPISVLFSAVGSRTPTVYPFFSLPSPPLSFRLRNKPQKQTLVVVIVVVVVVRII

Query:  PPPFLHFFL
        PPPFLHFFL
Subjt:  PPPFLHFFL
KAG7011646.1 hypothetical protein SDJN02_26552, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-52100Show/hide
Query:  MYGGDELENEDADLGQEPEVYKAQKQRNPFSILQCSFSCPPNRNPLIPISVLFSAVGSRTPTVYPFFSLPSPPLSFRLRNKPQKQTLVVVIVVVVVVRII
        MYGGDELENEDADLGQEPEVYKAQKQRNPFSILQCSFSCPPNRNPLIPISVLFSAVGSRTPTVYPFFSLPSPPLSFRLRNKPQKQTLVVVIVVVVVVRII
Subjt:  MYGGDELENEDADLGQEPEVYKAQKQRNPFSILQCSFSCPPNRNPLIPISVLFSAVGSRTPTVYPFFSLPSPPLSFRLRNKPQKQTLVVVIVVVVVVRII

Query:  PPPFLHFFL
        PPPFLHFFL
Subjt:  PPPFLHFFL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGGTGGCGATGAGCTTGAAAATGAAGACGCCGATTTAGGACAGGAACCGGAGGTATATAAAGCGCAGAAGCAACGAAATCCATTTTCCATTCTTCAGTGCAGTTT
CAGCTGCCCTCCAAATCGGAACCCTCTGATACCAATCTCGGTCTTGTTCTCCGCCGTCGGATCGCGGACTCCGACCGTCTATCCCTTCTTTAGCCTTCCCTCTCCTCCAC
TATCATTTCGCCTTCGCAACAAACCCCAAAAACAAACTCTTGTTGTTGTTATTGTTGTTGTTGTTGTTGTTAGGATTATCCCACCTCCGTTCTTACATTTTTTCCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTACGGTGGCGATGAGCTTGAAAATGAAGACGCCGATTTAGGACAGGAACCGGAGGTATATAAAGCGCAGAAGCAACGAAATCCATTTTCCATTCTTCAGTGCAGTTT
CAGCTGCCCTCCAAATCGGAACCCTCTGATACCAATCTCGGTCTTGTTCTCCGCCGTCGGATCGCGGACTCCGACCGTCTATCCCTTCTTTAGCCTTCCCTCTCCTCCAC
TATCATTTCGCCTTCGCAACAAACCCCAAAAACAAACTCTTGTTGTTGTTATTGTTGTTGTTGTTGTTGTTAGGATTATCCCACCTCCGTTCTTACATTTTTTCCTTTAA
Protein sequenceShow/hide protein sequence
MYGGDELENEDADLGQEPEVYKAQKQRNPFSILQCSFSCPPNRNPLIPISVLFSAVGSRTPTVYPFFSLPSPPLSFRLRNKPQKQTLVVVIVVVVVVRIIPPPFLHFFL