; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg22097 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22097
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description25.3 kDa vesicle transport protein isoform X1
Genome locationCarg_Chr18:11346624..11347147
RNA-Seq ExpressionCarg22097
SyntenyCarg22097
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process)
GO:0048280 - vesicle fusion with Golgi apparatus (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0005793 - endoplasmic reticulum-Golgi intermediate compartment (cellular component)
GO:0012507 - ER to Golgi transport vesicle membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031201 - SNARE complex (cellular component)
GO:0005484 - SNAP receptor activity (molecular function)
InterPro domainsIPR044565 - Vesicle-trafficking protein Sec22


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013229.1 hypothetical protein SDJN02_25987, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-61100Show/hide
Query:  MYADNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICNANSSSIWSFSILKEIGLKWTPVVVTFGVVLVLLWASFL
        MYADNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICNANSSSIWSFSILKEIGLKWTPVVVTFGVVLVLLWASFL
Subjt:  MYADNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICNANSSSIWSFSILKEIGLKWTPVVVTFGVVLVLLWASFL

Query:  LFDISLSHHNQFVILYNNRKLFH
        LFDISLSHHNQFVILYNNRKLFH
Subjt:  LFDISLSHHNQFVILYNNRKLFH

XP_022944814.1 25.3 kDa vesicle transport protein isoform X1 [Cucurbita moschata]3.1e-5492.5Show/hide
Query:  DNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICNANSSSIWSFSILKEIGLKWTPVVVTFGVVLVLLWASFLLFD
        DNII NIRKRYIDTRTQ NLYKLND RGQ DLDMVTCSF EIFER+RKITD  ERSICNANSSSIWSFSI+KEIGLKWTPVVVTFGVVLVLLWASFLLFD
Subjt:  DNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICNANSSSIWSFSILKEIGLKWTPVVVTFGVVLVLLWASFLLFD

Query:  ISLSHHNQFVILYNNRKLFH
        ISLSHHNQFVILYNNRKLFH
Subjt:  ISLSHHNQFVILYNNRKLFH

XP_022968542.1 25.3 kDa vesicle transport protein isoform X1 [Cucurbita maxima]7.0e-5491.67Show/hide
Query:  DNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICNANSSSIWSFSILKEIGLKWTPVVVTFGVVLVLLWASFLLFD
        DNIISNIRKRYIDTRTQ NLYKLND+R Q DLD+VTCS SEIFER+RKITD VERSICNANSSSIWSFS +KEIGLKWTPVVVTFGVVLVLLWASFLLFD
Subjt:  DNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICNANSSSIWSFSILKEIGLKWTPVVVTFGVVLVLLWASFLLFD

Query:  ISLSHHNQFVILYNNRKLFH
        ISLSHHNQFVILYNNRKLFH
Subjt:  ISLSHHNQFVILYNNRKLFH

XP_023541413.1 25.3 kDa vesicle transport protein [Cucurbita pepo subsp. pepo]2.0e-5693.33Show/hide
Query:  DNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICNANSSSIWSFSILKEIGLKWTPVVVTFGVVLVLLWASFLLFD
        DNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDM+TCSFSEIFER+RKITDT+ERSICNANSSSIWS+S LKEIGLKWTP+VVTFG VLVLLWASFLLFD
Subjt:  DNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICNANSSSIWSFSILKEIGLKWTPVVVTFGVVLVLLWASFLLFD

Query:  ISLSHHNQFVILYNNRKLFH
        ISL+HHNQFVILYNNRKLFH
Subjt:  ISLSHHNQFVILYNNRKLFH

XP_038875892.1 25.3 kDa vesicle transport protein [Benincasa hispida]3.4e-4074.4Show/hide
Query:  DNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICN-----ANSSSIWSFSILKEIGLKWTPVVVTFGVVLVLLWAS
        D IISNIRK+YIDTRTQANL KLN NR Q D DM+TCS SEI ER+RK+ D VERS+CN       SSSIW    L+EIGLKWTP+VVTFGVVL++LWAS
Subjt:  DNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICN-----ANSSSIWSFSILKEIGLKWTPVVVTFGVVLVLLWAS

Query:  FLLFDISLSHHNQFVILYNNRKLFH
        FLLFDISLS HN+FVILYNNRKLFH
Subjt:  FLLFDISLSHHNQFVILYNNRKLFH

TrEMBL top hitse value%identityAlignment
A0A0A0LBE2 Longin domain-containing protein7.5e-3872Show/hide
Query:  DNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICN------ANSSSIWSFSILKEIGLKWTPVVVTFGVVLVLLWA
        D+IISN+RK+YIDTRTQANL KLN NR Q D D+ TCS SEI ER+RK  D VERS  N       NS SIW    L+EIG+KWTP+VVTFGVVL++LWA
Subjt:  DNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICN------ANSSSIWSFSILKEIGLKWTPVVVTFGVVLVLLWA

Query:  SFLLFDISLSHHNQFVILYNNRKLF
        SFLLFDISLSHHNQFVILYNNRKLF
Subjt:  SFLLFDISLSHHNQFVILYNNRKLF

A0A1S3AYX3 25.3 kDa vesicle transport protein isoform X18.1e-4073.98Show/hide
Query:  DNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICNAN----SSSIWSFSILKEIGLKWTPVVVTFGVVLVLLWASF
        D+IISN+RK+YIDTRTQ NL KLN NR Q D D+++CSFSEI ER+RK+ D  ERS CN N    SSSIW    L+EIGLKWTP+VVTFGVVL++LWASF
Subjt:  DNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICNAN----SSSIWSFSILKEIGLKWTPVVVTFGVVLVLLWASF

Query:  LLFDISLSHHNQFVILYNNRKLF
        LLFDISLSHHNQFVILYNNRKLF
Subjt:  LLFDISLSHHNQFVILYNNRKLF

A0A1S4DSM7 25.3 kDa vesicle transport protein isoform X28.1e-4073.98Show/hide
Query:  DNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICNAN----SSSIWSFSILKEIGLKWTPVVVTFGVVLVLLWASF
        D+IISN+RK+YIDTRTQ NL KLN NR Q D D+++CSFSEI ER+RK+ D  ERS CN N    SSSIW    L+EIGLKWTP+VVTFGVVL++LWASF
Subjt:  DNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICNAN----SSSIWSFSILKEIGLKWTPVVVTFGVVLVLLWASF

Query:  LLFDISLSHHNQFVILYNNRKLF
        LLFDISLSHHNQFVILYNNRKLF
Subjt:  LLFDISLSHHNQFVILYNNRKLF

A0A6J1FZ74 25.3 kDa vesicle transport protein isoform X11.5e-5492.5Show/hide
Query:  DNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICNANSSSIWSFSILKEIGLKWTPVVVTFGVVLVLLWASFLLFD
        DNII NIRKRYIDTRTQ NLYKLND RGQ DLDMVTCSF EIFER+RKITD  ERSICNANSSSIWSFSI+KEIGLKWTPVVVTFGVVLVLLWASFLLFD
Subjt:  DNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICNANSSSIWSFSILKEIGLKWTPVVVTFGVVLVLLWASFLLFD

Query:  ISLSHHNQFVILYNNRKLFH
        ISLSHHNQFVILYNNRKLFH
Subjt:  ISLSHHNQFVILYNNRKLFH

A0A6J1HTS6 25.3 kDa vesicle transport protein isoform X13.4e-5491.67Show/hide
Query:  DNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICNANSSSIWSFSILKEIGLKWTPVVVTFGVVLVLLWASFLLFD
        DNIISNIRKRYIDTRTQ NLYKLND+R Q DLD+VTCS SEIFER+RKITD VERSICNANSSSIWSFS +KEIGLKWTPVVVTFGVVLVLLWASFLLFD
Subjt:  DNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICNANSSSIWSFSILKEIGLKWTPVVVTFGVVLVLLWASFLLFD

Query:  ISLSHHNQFVILYNNRKLFH
        ISLSHHNQFVILYNNRKLFH
Subjt:  ISLSHHNQFVILYNNRKLFH

SwissProt top hitse value%identityAlignment
Q94AU2 25.3 kDa vesicle transport protein2.4e-0431.96Show/hide
Query:  DNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICNANSSSIWSFSI----LKEIGLKWTPVVVTFGVVLVLLW
        D  I   +K Y DTRTQ N+ KLND   ++   ++T +  E+     K+    E S    + S I++        + +  KW PV + FGVV +L W
Subjt:  DNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICNANSSSIWSFSI----LKEIGLKWTPVVVTFGVVLVLLW

Arabidopsis top hitse value%identityAlignment
AT1G11890.1 Synaptobrevin family protein1.7e-0531.96Show/hide
Query:  DNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICNANSSSIWSFSI----LKEIGLKWTPVVVTFGVVLVLLW
        D  I   +K Y DTRTQ N+ KLND   ++   ++T +  E+     K+    E S    + S I++        + +  KW PV + FGVV +L W
Subjt:  DNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICNANSSSIWSFSI----LKEIGLKWTPVVVTFGVVLVLLW

AT5G52270.1 SNARE-like superfamily protein1.3e-0557.78Show/hide
Query:  IISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKR
        II  IRK+YIDTRTQANL KLN  R Q +LD+VT   ++I +R++
Subjt:  IISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGCAGATAATATTATTAGCAATATTAGGAAGCGATACATTGATACAAGAACACAAGCTAATCTATACAAGCTCAATGATAACCGTGGTCAAATTGATCTAGACAT
GGTTACTTGTTCGTTCTCTGAAATTTTTGAAAGAAAGAGAAAGATAACGGATACAGTGGAAAGATCAATTTGTAATGCAAATTCCTCTTCCATTTGGAGCTTTTCAATTC
TCAAGGAAATTGGGTTGAAATGGACGCCAGTGGTTGTAACTTTTGGTGTAGTGCTTGTACTTTTATGGGCTTCCTTTCTTCTCTTCGACATCTCATTATCTCATCATAAT
CAATTTGTAATTCTATATAACAATAGAAAATTGTTTCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATGCAGATAATATTATTAGCAATATTAGGAAGCGATACATTGATACAAGAACACAAGCTAATCTATACAAGCTCAATGATAACCGTGGTCAAATTGATCTAGACAT
GGTTACTTGTTCGTTCTCTGAAATTTTTGAAAGAAAGAGAAAGATAACGGATACAGTGGAAAGATCAATTTGTAATGCAAATTCCTCTTCCATTTGGAGCTTTTCAATTC
TCAAGGAAATTGGGTTGAAATGGACGCCAGTGGTTGTAACTTTTGGTGTAGTGCTTGTACTTTTATGGGCTTCCTTTCTTCTCTTCGACATCTCATTATCTCATCATAAT
CAATTTGTAATTCTATATAACAATAGAAAATTGTTTCACTAA
Protein sequenceShow/hide protein sequence
MYADNIISNIRKRYIDTRTQANLYKLNDNRGQIDLDMVTCSFSEIFERKRKITDTVERSICNANSSSIWSFSILKEIGLKWTPVVVTFGVVLVLLWASFLLFDISLSHHN
QFVILYNNRKLFH