CuGenDBv2

Gene ID	Carg22098
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	25.3 kDa vesicle transport protein
Genome location	Carg_Chr18:11347240..11347882
RNA-Seq Expression	Carg22098
Synteny	Carg22098
Gene Ontology terms	GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process) GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process) GO:0048280 - vesicle fusion with Golgi apparatus (biological process) GO:0000139 - Golgi membrane (cellular component) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0005793 - endoplasmic reticulum-Golgi intermediate compartment (cellular component) GO:0012507 - ER to Golgi transport vesicle membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0031201 - SNARE complex (cellular component) GO:0005484 - SNAP receptor activity (molecular function)
InterPro domains	IPR010908 - Longin domain IPR011012 - Longin-like domain superfamily IPR044565 - Vesicle-trafficking protein Sec22

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7013230.1 25.3 kDa vesicle transport protein, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.4e-85

100

Show/hide

Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ
        MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ

Query:  DLQREFSKFDDALLNSLIKPYSFPKFGNLSQPSSSMPARLRAKIKEYMSYSRSCPYFTSF
        DLQREFSKFDDALLNSLIKPYSFPKFGNLSQPSSSMPARLRAKIKEYMSYSRSCPYFTSF
Subjt:  DLQREFSKFDDALLNSLIKPYSFPKFGNLSQPSSSMPARLRAKIKEYMSYSRSCPYFTSF

XP_022944814.1 25.3 kDa vesicle transport protein isoform X1 [Cucurbita moschata]

3.3e-56

88.37

Show/hide

Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ
        MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILK+ISRGALSPPKMVIQMHHHSF+         YLIENGVCYMTLCDSLYPRKLAIHYLQ
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ

Query:  DLQREFSKFDDALLNSLIKPYSFPKFGNL
        DLQREFSKFDDALLNSL+KPYSF KF N+
Subjt:  DLQREFSKFDDALLNSLIKPYSFPKFGNL

XP_022944815.1 25.3 kDa vesicle transport protein isoform X2 [Cucurbita moschata]

3.3e-56

88.37

Show/hide

Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ
        MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILK+ISRGALSPPKMVIQMHHHSF+         YLIENGVCYMTLCDSLYPRKLAIHYLQ
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ

Query:  DLQREFSKFDDALLNSLIKPYSFPKFGNL
        DLQREFSKFDDALLNSL+KPYSF KF N+
Subjt:  DLQREFSKFDDALLNSLIKPYSFPKFGNL

XP_022968542.1 25.3 kDa vesicle transport protein isoform X1 [Cucurbita maxima]

5.7e-56

87.6

Show/hide

Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ
        MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILK+ISRGALS PKM IQMHHHSF+         YLIENGVCYMTLCDSLYPRKLAIHYLQ
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ

Query:  DLQREFSKFDDALLNSLIKPYSFPKFGNL
        DLQREFSKFDDALLNSL+KPYSFPKF N+
Subjt:  DLQREFSKFDDALLNSLIKPYSFPKFGNL

XP_022968543.1 25.3 kDa vesicle transport protein isoform X2 [Cucurbita maxima]

5.7e-56

87.6

Show/hide

Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ
        MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILK+ISRGALS PKM IQMHHHSF+         YLIENGVCYMTLCDSLYPRKLAIHYLQ
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ

Query:  DLQREFSKFDDALLNSLIKPYSFPKFGNL
        DLQREFSKFDDALLNSL+KPYSFPKF N+
Subjt:  DLQREFSKFDDALLNSLIKPYSFPKFGNL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBE2 Longin domain-containing protein

5.9e-51

79.07

Show/hide

Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ
        MVKLTMVGRVRDG+P+AQGIRYVNEENDDV GYK+QAEFILK+ISRG LSPPKMVI MHHHSF+         YL+ENGVCYMTLCDS YPRKLAIHYLQ
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ

Query:  DLQREFSKFDDALLNSLIKPYSFPKFGNL
        DLQ+EF KFDDAL+N LIKPYSF KF ++
Subjt:  DLQREFSKFDDALLNSLIKPYSFPKFGNL

A0A6J1FZ49 25.3 kDa vesicle transport protein isoform X2

1.6e-56

88.37

Show/hide

Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ
        MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILK+ISRGALSPPKMVIQMHHHSF+         YLIENGVCYMTLCDSLYPRKLAIHYLQ
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ

Query:  DLQREFSKFDDALLNSLIKPYSFPKFGNL
        DLQREFSKFDDALLNSL+KPYSF KF N+
Subjt:  DLQREFSKFDDALLNSLIKPYSFPKFGNL

A0A6J1FZ74 25.3 kDa vesicle transport protein isoform X1

1.6e-56

88.37

Show/hide

Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ
        MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILK+ISRGALSPPKMVIQMHHHSF+         YLIENGVCYMTLCDSLYPRKLAIHYLQ
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ

Query:  DLQREFSKFDDALLNSLIKPYSFPKFGNL
        DLQREFSKFDDALLNSL+KPYSF KF N+
Subjt:  DLQREFSKFDDALLNSLIKPYSFPKFGNL

A0A6J1HTS6 25.3 kDa vesicle transport protein isoform X1

2.7e-56

87.6

Show/hide

Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ
        MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILK+ISRGALS PKM IQMHHHSF+         YLIENGVCYMTLCDSLYPRKLAIHYLQ
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ

Query:  DLQREFSKFDDALLNSLIKPYSFPKFGNL
        DLQREFSKFDDALLNSL+KPYSFPKF N+
Subjt:  DLQREFSKFDDALLNSLIKPYSFPKFGNL

A0A6J1HYB5 25.3 kDa vesicle transport protein isoform X2

2.7e-56

87.6

Show/hide

Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ
        MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILK+ISRGALS PKM IQMHHHSF+         YLIENGVCYMTLCDSLYPRKLAIHYLQ
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ

Query:  DLQREFSKFDDALLNSLIKPYSFPKFGNL
        DLQREFSKFDDALLNSL+KPYSFPKF N+
Subjt:  DLQREFSKFDDALLNSLIKPYSFPKFGNL

SwissProt top hits

e value

%identity

Alignment

O08547 Vesicle-trafficking protein SEC22b

2.7e-16

32.17

Show/hide

Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ
        MV LTM+ RV DG+PLA  ++   +   D+  Y+ QA+ + ++++    SP +  ++         + ++ F Y+IE GVCY+ LC++ +P+KLA  YL+
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ

Query:  DLQREFSKFDDALLNSLIKPYSFPKFGNLSQPSSSMPARLRAK
        DL  EF +     + ++ +PYSF +F    Q +  +    RA+
Subjt:  DLQREFSKFDDALLNSLIKPYSFPKFGNLSQPSSSMPARLRAK

Q5RAI9 Vesicle-trafficking protein SEC22b

2.7e-16

32.17

Show/hide

Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ
        MV LTM+ RV DG+PLA  ++   +   D+  Y+ QA+ + ++++    SP +  ++         + ++ F Y+IE GVCY+ LC++ +P+KLA  YL+
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ

Query:  DLQREFSKFDDALLNSLIKPYSFPKFGNLSQPSSSMPARLRAK
        DL  EF +     + ++ +PYSF +F    Q +  +    RA+
Subjt:  DLQREFSKFDDALLNSLIKPYSFPKFGNLSQPSSSMPARLRAK

Q5ZJW4 Vesicle-trafficking protein SEC22b

9.2e-17

32.87

Show/hide

Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ
        MV LTM+ RV DG+PLA  ++   +   D+  Y+ QA+ + ++++    SP +  ++         + ++ F Y+IE GVCY+ LC++ +P+KLA  YL+
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ

Query:  DLQREFSKFDDALLNSLIKPYSFPKFGNLSQPSSSMPARLRAK
        DLQ EF +     + ++ +PYSF +F    Q +  +    RA+
Subjt:  DLQREFSKFDDALLNSLIKPYSFPKFGNLSQPSSSMPARLRAK

Q6P7L4 Vesicle-trafficking protein SEC22b

2.0e-16

33.57

Show/hide

Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ
        MV LTM+ RV DG+PLA  ++   +   D+  Y+ QA+ + ++++    SP +  ++         + ++ F YLIE GVCY+ LC++ +P+KLA  YL+
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ

Query:  DLQREFSKFDDALLNSLIKPYSFPKFGNLSQPSSSMPARLRAK
        DL  EF +     + ++ +PYSF +F N  Q +       RA+
Subjt:  DLQREFSKFDDALLNSLIKPYSFPKFGNLSQPSSSMPARLRAK

Q94AU2 25.3 kDa vesicle transport protein

2.6e-19

36.03

Show/hide

Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ
        MVK+T++ RV DG+PLA+G+    +  D  + YKQQ + + K +SRG     +M ++         +    F Y+IE  VCY+T+CD  YP+KLA  YL+
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ

Query:  DLQREFSKFDDALLNSLIKPYSFPKFGNLSQPSSSM
        DL+ EF + +   + +  +PY+F KF    Q +  +
Subjt:  DLQREFSKFDDALLNSLIKPYSFPKFGNLSQPSSSM

Arabidopsis top hits

e value

%identity

Alignment

AT1G11890.1 Synaptobrevin family protein

1.8e-20

36.03

Show/hide

Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ
        MVK+T++ RV DG+PLA+G+    +  D  + YKQQ + + K +SRG     +M ++         +    F Y+IE  VCY+T+CD  YP+KLA  YL+
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQ

Query:  DLQREFSKFDDALLNSLIKPYSFPKFGNLSQPSSSM
        DL+ EF + +   + +  +PY+F KF    Q +  +
Subjt:  DLQREFSKFDDALLNSLIKPYSFPKFGNLSQPSSSM

AT5G52270.1 SNARE-like superfamily protein

1.5e-30

52.67

Show/hide

Query:  MVKLTMVGRVRDGVPLAQGIRYVN-EENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYL
        MVKLT+VGRV DG+PLAQ   YVN E+N   L YKQQAEF+LKQ+S+ +L  PKM I + HHS         F +L+E  +CY+ L DS YPRKL  +YL
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVN-EENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYL

Query:  QDLQREFSKFDD-ALLNSLIKPYSFPKFGNL
        Q+L +E  K D+ AL+  + KPYSF +FG +
Subjt:  QDLQREFSKFDD-ALLNSLIKPYSFPKFGNL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTGAAGCTGACAATGGTGGGAAGGGTTAGGGATGGAGTGCCACTTGCACAAGGCATTAGGTATGTCAATGAAGAGAATGACGATGTTTTGGGGTACAAACAGCAAGC
TGAGTTCATACTCAAACAGATCTCTAGAGGGGCTTTGTCACCTCCAAAAATGGTCATTCAAATGCATCATCACTCTTTCATGTACCGTTCTAACTCTCTTTTCTTTACTT
ACTTGATCGAGAACGGAGTGTGTTACATGACGTTATGCGATTCTTTATACCCAAGAAAGCTGGCTATCCATTACTTGCAAGATCTGCAAAGGGAGTTTTCCAAGTTTGAT
GATGCCCTACTAAACAGCCTTATCAAACCCTATAGTTTCCCCAAATTTGGTAACCTTTCTCAACCCTCTTCATCCATGCCTGCCCGACTTAGGGCAAAAATAAAAGAATA
TATGTCTTATTCTCGCTCGTGTCCCTACTTTACCTCCTTCTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFD
DALLNSLIKPYSFPKFGNLSQPSSSMPARLRAKIKEYMSYSRSCPYFTSF

Carg22098 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome