; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg22102 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22102
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionActin-depolymerizing factor
Genome locationCarg_Chr18:11355989..11356661
RNA-Seq ExpressionCarg22102
SyntenyCarg22102
Gene Ontology termsGO:0030042 - actin filament depolymerization (biological process)
GO:0015629 - actin cytoskeleton (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003779 - actin binding (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002108 - Actin-depolymerising factor homology domain
IPR017904 - ADF/Cofilin
IPR029006 - ADF-H/Gelsolin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574178.1 Actin-depolymerizing factor 7, partial [Cucurbita argyrosperma subsp. sororia]3.5e-70100Show/hide
Query:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV
        MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV
Subjt:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF
        YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF
Subjt:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF

XP_022945772.1 uncharacterized protein LOC111449917 [Cucurbita moschata]7.7e-7099.27Show/hide
Query:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV
        MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETY+DFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV
Subjt:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF
        YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF
Subjt:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF

XP_022967999.1 uncharacterized protein LOC111467373 [Cucurbita maxima]2.2e-6998.54Show/hide
Query:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV
        MANAASGM VRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETY+DFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV
Subjt:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF
        YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF
Subjt:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF

XP_023542027.1 uncharacterized protein LOC111802000 [Cucurbita pepo subsp. pepo]6.5e-6997.81Show/hide
Query:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV
        MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPT+TY+DF AAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV
Subjt:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF
        YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF
Subjt:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF

XP_038886312.1 uncharacterized protein LOC120076526 [Benincasa hispida]8.0e-6796.35Show/hide
Query:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV
        MAN+ASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSP ETYEDFTAAIP NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTS VRNKMV
Subjt:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF
        YASSKDRFKRELDGIQVELQATD SEMSFDIIKARAF
Subjt:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF

TrEMBL top hitse value%identityAlignment
A0A0A0LBE8 ADF-H domain-containing protein1.1e-6695.62Show/hide
Query:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV
        MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSP ETY+DF+AAIP NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTS VRNKMV
Subjt:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF
        YASSKDRFKRELDGIQVELQATD SEMSFDIIKARAF
Subjt:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF

A0A5A7SR44 Zinc finger CCHC domain-containing protein 95.6e-6695.59Show/hide
Query:  ANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVY
        ANAASGMAVRDECKLKFLELK KRNYRFIIFKIENQEVVVEKLGSP ETY+DFTAAIP NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTS VRNKMVY
Subjt:  ANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVY

Query:  ASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF
        ASSKDRFKRELDGIQVELQATD SEMSFDIIKARAF
Subjt:  ASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF

A0A6J1CI48 uncharacterized protein LOC1110116011.1e-6694.89Show/hide
Query:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV
        MAN+ASGMAVRDECKLKF+ELK KRNYRFIIFKIENQEVVVEKLGSP ETYEDFTAAIPP+ECRYAVFDFDFTTDENCQKSKIFFIAWSPDTS VRNKMV
Subjt:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF
        YASSKDRFKRELDGIQVELQATD SEMSFDIIKARAF
Subjt:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF

A0A6J1G1V2 uncharacterized protein LOC1114499173.7e-7099.27Show/hide
Query:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV
        MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETY+DFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV
Subjt:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF
        YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF
Subjt:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF

A0A6J1HYC2 uncharacterized protein LOC1114673731.1e-6998.54Show/hide
Query:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV
        MANAASGM VRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETY+DFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV
Subjt:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF
        YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF
Subjt:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF

SwissProt top hitse value%identityAlignment
P30175 Actin-depolymerizing factor2.2e-5979.86Show/hide
Query:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNK
        MAN++SGMAV DECKLKF+ELK KRN+RFI+FKIE   Q+V VE+LG P E+Y+DFT  +PPNECRYAVFDFDF TDENCQKSKIFFI+WSPDTS VR+K
Subjt:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNK

Query:  MVYASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF
        M+YAS+KDRFKRELDGIQVELQATD SEMS DIIKARAF
Subjt:  MVYASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF

Q67ZM4 Actin-depolymerizing factor 77.3e-6386.76Show/hide
Query:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV
        MANAASGMAV DECKLKFLELK+KRNYRFIIF+I+ Q+VVVEKLG+P ETY+DFTA++P NECRYAVFDFDF TDENCQKSKIFFIAWSPD+S VR KMV
Subjt:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARA
        YASSKDRFKRELDGIQVELQATD SEMSFDIIK+RA
Subjt:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARA

Q7XSN9 Actin-depolymerizing factor 61.3e-5678.26Show/hide
Query:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIE--NQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNK
        MAN+ASGMAV DECKLKF ELK+KR++RFI FKI+   Q+VVV++LG P +TY+DFTA++P +ECRYAVFDFDF TDENCQKSKIFFI+WSPDTS VR+K
Subjt:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIE--NQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNK

Query:  MVYASSKDRFKRELDGIQVELQATDASEMSFDIIKARA
        M+YASSKDRFKRELDGIQVELQATD SEMS DI+KARA
Subjt:  MVYASSKDRFKRELDGIQVELQATDASEMSFDIIKARA

Q8LFH6 Actin-depolymerizing factor 125.8e-6084.56Show/hide
Query:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV
        MANAASGMAV DECKLKFLELK KRNYRFIIF+I+ Q+VVVEKLGSP E Y+DFT  +PPNECRYAV+DFDFTT EN QKSKIFFIAWSPD+S VR KMV
Subjt:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARA
        YASSKDRFKRELDGIQVELQATD SEMS DIIK+RA
Subjt:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARA

Q9LQ81 Actin-depolymerizing factor 102.7e-5779.56Show/hide
Query:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNK
        MAN+ASGM V DECKLKFLELK KRNYRFI+FKI+   Q+V+++KLG+P ETYEDFT +IP +ECRYAV+D+DFTT ENCQKSKIFFIAWSPDTS VR+K
Subjt:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNK

Query:  MVYASSKDRFKRELDGIQVELQATDASEMSFDIIKAR
        M+YASSKDRFKRELDGIQVELQATD SEMS DIIK R
Subjt:  MVYASSKDRFKRELDGIQVELQATDASEMSFDIIKAR

Arabidopsis top hitse value%identityAlignment
AT1G01750.1 actin depolymerizing factor 111.9e-5879.56Show/hide
Query:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNK
        MAN+ASGM V DECKLKFLELK KRNYRFI+FKI+   Q+V+++KLG+P ETYEDFT +IP +ECRYAV+D+DFTT ENCQKSKIFFIAWSPDTS VR+K
Subjt:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNK

Query:  MVYASSKDRFKRELDGIQVELQATDASEMSFDIIKAR
        M+YASSKDRFKRELDGIQVELQATD SEMS DIIK R
Subjt:  MVYASSKDRFKRELDGIQVELQATDASEMSFDIIKAR

AT3G46000.1 actin depolymerizing factor 21.3e-5470.37Show/hide
Query:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV
        MANAASGMAV D+CKLKF+ELK KR +R I++KIE+++V+VEKLG P ++Y+DF A++P ++CRY ++DFDF T ENCQKSKIFFIAWSPDT+ VR+KM+
Subjt:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKAR
        YASSKDRFKRELDGIQVELQATD +EM  D+ K+R
Subjt:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKAR

AT4G00680.1 actin depolymerizing factor 83.6e-5776.64Show/hide
Query:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNK
        MAN+ASGM V DECK+KFLELK KR YRFI+FKI+   Q+V +EKLG+P ETY+DFT++IP +ECRYAV+DFDFTT++NCQKSKIFFIAWSPDTS VR+K
Subjt:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNK

Query:  MVYASSKDRFKRELDGIQVELQATDASEMSFDIIKAR
        M+YASSKDRFKRE++GIQVELQATD SEMS DIIK R
Subjt:  MVYASSKDRFKRELDGIQVELQATDASEMSFDIIKAR

AT4G25590.1 actin depolymerizing factor 75.2e-6486.76Show/hide
Query:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV
        MANAASGMAV DECKLKFLELK+KRNYRFIIF+I+ Q+VVVEKLG+P ETY+DFTA++P NECRYAVFDFDF TDENCQKSKIFFIAWSPD+S VR KMV
Subjt:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARA
        YASSKDRFKRELDGIQVELQATD SEMSFDIIK+RA
Subjt:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARA

AT5G52360.1 actin depolymerizing factor 104.1e-6184.56Show/hide
Query:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV
        MANAASGMAV DECKLKFLELK KRNYRFIIF+I+ Q+VVVEKLGSP E Y+DFT  +PPNECRYAV+DFDFTT EN QKSKIFFIAWSPD+S VR KMV
Subjt:  MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMV

Query:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARA
        YASSKDRFKRELDGIQVELQATD SEMS DIIK+RA
Subjt:  YASSKDRFKRELDGIQVELQATDASEMSFDIIKARA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACGCGGCATCTGGAATGGCTGTGAGAGATGAGTGCAAGCTCAAGTTTTTGGAGTTGAAAACAAAGAGGAACTATCGTTTCATTATATTCAAGATTGAGAATCA
AGAAGTTGTTGTGGAGAAACTTGGAAGCCCTACAGAAACCTACGAAGATTTCACTGCTGCTATTCCTCCTAACGAGTGTCGTTATGCTGTCTTTGATTTTGACTTCACCA
CCGACGAGAACTGCCAGAAAAGCAAGATCTTTTTCATAGCATGGTCACCCGACACATCGATCGTGCGAAATAAGATGGTGTATGCAAGCTCCAAGGACAGATTCAAGAGG
GAATTGGATGGAATTCAGGTGGAATTGCAAGCCACTGATGCAAGCGAAATGAGCTTCGACATAATCAAAGCTCGAGCCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAACGCGGCATCTGGAATGGCTGTGAGAGATGAGTGCAAGCTCAAGTTTTTGGAGTTGAAAACAAAGAGGAACTATCGTTTCATTATATTCAAGATTGAGAATCA
AGAAGTTGTTGTGGAGAAACTTGGAAGCCCTACAGAAACCTACGAAGATTTCACTGCTGCTATTCCTCCTAACGAGTGTCGTTATGCTGTCTTTGATTTTGACTTCACCA
CCGACGAGAACTGCCAGAAAAGCAAGATCTTTTTCATAGCATGGTCACCCGACACATCGATCGTGCGAAATAAGATGGTGTATGCAAGCTCCAAGGACAGATTCAAGAGG
GAATTGGATGGAATTCAGGTGGAATTGCAAGCCACTGATGCAAGCGAAATGAGCTTCGACATAATCAAAGCTCGAGCCTTTTAAGCTCACTTTTCATCTCCATTCTTGAG
CCTGC
Protein sequenceShow/hide protein sequence
MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKR
ELDGIQVELQATDASEMSFDIIKARAF