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Carg22115 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22115
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr18:11414784..11417418
RNA-Seq ExpressionCarg22115
SyntenyCarg22115
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574190.1 Silicon efflux transporter LSI3, partial [Cucurbita argyrosperma subsp. sororia]2.2e-0554.55Show/hide
Query:  MSILGRLNQWLWESSGQI--VAGMEDFVTSSSLLSFLKFKLKLQQTVLEVVELENCLAFYYMKDQVIILKEVKMPIL
        +S+LG     +WE  G I     +EDFVTSSSLLSFLKFKLKLQQT               MKDQVIILKEVK  +L
Subjt:  MSILGRLNQWLWESSGQI--VAGMEDFVTSSSLLSFLKFKLKLQQTVLEVVELENCLAFYYMKDQVIILKEVKMPIL
KAG7013247.1 hypothetical protein SDJN02_26005, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-92100Show/hide
Query:  MLELSMRRRRWWGEGGRQRHWRSMSSRGYRRSVWCNGRWGKGKGSGWMEVEVREAMSILGRLNQWLWESSGQIVAGMEDFVTSSSLLSFLKFKLKLQQTV
        MLELSMRRRRWWGEGGRQRHWRSMSSRGYRRSVWCNGRWGKGKGSGWMEVEVREAMSILGRLNQWLWESSGQIVAGMEDFVTSSSLLSFLKFKLKLQQTV
Subjt:  MLELSMRRRRWWGEGGRQRHWRSMSSRGYRRSVWCNGRWGKGKGSGWMEVEVREAMSILGRLNQWLWESSGQIVAGMEDFVTSSSLLSFLKFKLKLQQTV

Query:  LEVVELENCLAFYYMKDQVIILKEVKMPILENTTGHRSGSLDTQSQIYQCADGVKANYGMKGIMYLSDALEV
        LEVVELENCLAFYYMKDQVIILKEVKMPILENTTGHRSGSLDTQSQIYQCADGVKANYGMKGIMYLSDALEV
Subjt:  LEVVELENCLAFYYMKDQVIILKEVKMPILENTTGHRSGSLDTQSQIYQCADGVKANYGMKGIMYLSDALEV
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAACTGAGCATGAGGAGGAGGAGGTGGTGGGGTGAAGGGGGAAGGCAAAGGCATTGGAGAAGCATGAGTAGTCGAGGATATAGACGAAGTGTGTGGTGTAATGG
AAGATGGGGAAAAGGGAAGGGATCTGGCTGGATGGAGGTTGAGGTAAGGGAAGCCATGTCAATATTGGGTAGGTTGAATCAATGGTTGTGGGAGAGTTCGGGGCAAATAG
TTGCTGGTATGGAAGATTTTGTTACTAGTTCCTCATTATTGAGCTTCCTCAAATTCAAGCTGAAGTTGCAACAAACGGTTTTAGAAGTTGTAGAATTGGAAAATTGTTTG
GCATTCTATTATATGAAGGATCAAGTGATAATTCTGAAAGAAGTGAAAATGCCTATATTAGAAAATACGACCGGTCACAGAAGTGGTAGCTTGGATACTCAGTCACAGAT
TTACCAGTGTGCCGATGGGGTAAAAGCTAATTATGGCATGAAGGGTATCATGTACTTGTCGGATGCTTTGGAAGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAACTGAGCATGAGGAGGAGGAGGTGGTGGGGTGAAGGGGGAAGGCAAAGGCATTGGAGAAGCATGAGTAGTCGAGGATATAGACGAAGTGTGTGGTGTAATGG
AAGATGGGGAAAAGGGAAGGGATCTGGCTGGATGGAGGTTGAGGTAAGGGAAGCCATGTCAATATTGGGTAGGTTGAATCAATGGTTGTGGGAGAGTTCGGGGCAAATAG
TTGCTGGTATGGAAGATTTTGTTACTAGTTCCTCATTATTGAGCTTCCTCAAATTCAAGCTGAAGTTGCAACAAACGGTTTTAGAAGTTGTAGAATTGGAAAATTGTTTG
GCATTCTATTATATGAAGGATCAAGTGATAATTCTGAAAGAAGTGAAAATGCCTATATTAGAAAATACGACCGGTCACAGAAGTGGTAGCTTGGATACTCAGTCACAGAT
TTACCAGTGTGCCGATGGGGTAAAAGCTAATTATGGCATGAAGGGTATCATGTACTTGTCGGATGCTTTGGAAGTGTAA
Protein sequenceShow/hide protein sequence
MLELSMRRRRWWGEGGRQRHWRSMSSRGYRRSVWCNGRWGKGKGSGWMEVEVREAMSILGRLNQWLWESSGQIVAGMEDFVTSSSLLSFLKFKLKLQQTVLEVVELENCL
AFYYMKDQVIILKEVKMPILENTTGHRSGSLDTQSQIYQCADGVKANYGMKGIMYLSDALEV