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Carg22130 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22130
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein REVEILLE 6-like
Genome locationCarg_Chr18:11485491..11486277
RNA-Seq ExpressionCarg22130
SyntenyCarg22130
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574201.1 Protein REVEILLE 6, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3166.94Show/hide
Query:  MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGT
        MALPFNAAPTSSREDLSKRARK  ++  C    +             FDRDWKKIEAFVGSKTVIQ                 IRSHAQKYFLKVEKSGT
Subjt:  MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGT

Query:  GEHLPPPRPKRKAAHPYPQKASKI
        GEHLPPPRPKRKAAHPYPQKASKI
Subjt:  GEHLPPPRPKRKAAHPYPQKASKI

KAG7013262.1 Protein REVEILLE 6, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-65100Show/hide
Query:  MALPFNAAPTSSREDLSKRARKRCSLFCSTGASGFMSGGIALVFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTG
        MALPFNAAPTSSREDLSKRARKRCSLFCSTGASGFMSGGIALVFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTG
Subjt:  MALPFNAAPTSSREDLSKRARKRCSLFCSTGASGFMSGGIALVFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTG

Query:  EHLPPPRPKRKAAHPYPQKASKIGQDSFNL
        EHLPPPRPKRKAAHPYPQKASKIGQDSFNL
Subjt:  EHLPPPRPKRKAAHPYPQKASKIGQDSFNL

XP_022944893.1 protein REVEILLE 6-like [Cucurbita moschata]2.3e-3166.94Show/hide
Query:  MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGT
        MALPFNAAPTSSREDLSKRARK  ++  C    +             FDRDWKKIEAFVGSKTVIQ                 IRSHAQKYFLKVEKSGT
Subjt:  MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGT

Query:  GEHLPPPRPKRKAAHPYPQKASKI
        GEHLPPPRPKRKAAHPYPQKASKI
Subjt:  GEHLPPPRPKRKAAHPYPQKASKI

XP_022968540.1 protein REVEILLE 6-like isoform X1 [Cucurbita maxima]5.1e-3166.13Show/hide
Query:  MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGT
        MALPFNAAPTSS+EDLSKRARK  ++  C    +             FDRDWKKIEAFVGSKTVIQ                 IRSHAQKYFLKVEKSGT
Subjt:  MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGT

Query:  GEHLPPPRPKRKAAHPYPQKASKI
        GEHLPPPRPKRKAAHPYPQKASKI
Subjt:  GEHLPPPRPKRKAAHPYPQKASKI

XP_023541352.1 protein REVEILLE 6-like [Cucurbita pepo subsp. pepo]2.3e-3166.94Show/hide
Query:  MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGT
        MALPFNAAPTSSREDLSKRARK  ++  C    +             FDRDWKKIEAFVGSKTVIQ                 IRSHAQKYFLKVEKSGT
Subjt:  MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGT

Query:  GEHLPPPRPKRKAAHPYPQKASKI
        GEHLPPPRPKRKAAHPYPQKASKI
Subjt:  GEHLPPPRPKRKAAHPYPQKASKI

TrEMBL top hitse value%identityAlignment
A0A1S3AYG1 protein REVEILLE 6-like isoform X28.8e-2962.4Show/hide
Query:  MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGT
        MALPF +  TSSR+DLSKRARK  ++  C    +             FDRDWKKIEAFVGSKTVIQ                 IRSHAQKYFLKVEKSGT
Subjt:  MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGT

Query:  GEHLPPPRPKRKAAHPYPQKASKIG
        GEHLPPPRPKRKAAHPYPQKASK G
Subjt:  GEHLPPPRPKRKAAHPYPQKASKIG

A0A1S3AZ30 protein REVEILLE 6-like isoform X48.8e-2962.4Show/hide
Query:  MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGT
        MALPF +  TSSR+DLSKRARK  ++  C    +             FDRDWKKIEAFVGSKTVIQ                 IRSHAQKYFLKVEKSGT
Subjt:  MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGT

Query:  GEHLPPPRPKRKAAHPYPQKASKIG
        GEHLPPPRPKRKAAHPYPQKASK G
Subjt:  GEHLPPPRPKRKAAHPYPQKASKIG

A0A6J1FZB1 protein REVEILLE 6-like1.1e-3166.94Show/hide
Query:  MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGT
        MALPFNAAPTSSREDLSKRARK  ++  C    +             FDRDWKKIEAFVGSKTVIQ                 IRSHAQKYFLKVEKSGT
Subjt:  MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGT

Query:  GEHLPPPRPKRKAAHPYPQKASKI
        GEHLPPPRPKRKAAHPYPQKASKI
Subjt:  GEHLPPPRPKRKAAHPYPQKASKI

A0A6J1HV68 protein REVEILLE 6-like isoform X22.5e-3166.13Show/hide
Query:  MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGT
        MALPFNAAPTSS+EDLSKRARK  ++  C    +             FDRDWKKIEAFVGSKTVIQ                 IRSHAQKYFLKVEKSGT
Subjt:  MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGT

Query:  GEHLPPPRPKRKAAHPYPQKASKI
        GEHLPPPRPKRKAAHPYPQKASKI
Subjt:  GEHLPPPRPKRKAAHPYPQKASKI

A0A6J1HXG5 protein REVEILLE 6-like isoform X12.5e-3166.13Show/hide
Query:  MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGT
        MALPFNAAPTSS+EDLSKRARK  ++  C    +             FDRDWKKIEAFVGSKTVIQ                 IRSHAQKYFLKVEKSGT
Subjt:  MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGT

Query:  GEHLPPPRPKRKAAHPYPQKASKI
        GEHLPPPRPKRKAAHPYPQKASKI
Subjt:  GEHLPPPRPKRKAAHPYPQKASKI

SwissProt top hitse value%identityAlignment
C0SVG5 Protein REVEILLE 55.0e-2168.42Show/hide
Query:  FDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASK
        FDRDWKKIEAFVGSKTV+Q                 IRSHAQKYFLKV+KSG  EHLPPPRPKRKA+HPYP KA K
Subjt:  FDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASK

Q6R0G4 Protein REVEILLE 45.9e-2265.48Show/hide
Query:  FDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKIGQDSFNL
        FDRDWKKIE FVGSKTVIQ                 IRSHAQKYFLKV+K+GT  H+PPPRPKRKAAHPYPQKASK  Q S ++
Subjt:  FDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKIGQDSFNL

Q6R0H0 Protein REVEILLE 35.9e-2266.27Show/hide
Query:  FDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKIGQDSFN
        FDRDWKKI+AFVGSKTVIQ                 IRSHAQKYFLKV+K+GT EHLPPPRPKRKA HPYPQKA K    S N
Subjt:  FDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKIGQDSFN

Q8H0W3 Protein REVEILLE 69.7e-2558.12Show/hide
Query:  AAPTSSREDLSKRARKRCSLFCSTGASGFMSGGIAL-VFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPP
        A  +SS EDLSK+ RK  ++  S  +         L     FDRDWKKIEAF+GSKTVIQ                 IRSHAQKYFLKV+KSGTGEHLPP
Subjt:  AAPTSSREDLSKRARKRCSLFCSTGASGFMSGGIAL-VFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPP

Query:  PRPKRKAAHPYPQKASK
        PRPKRKAAHPYPQKA K
Subjt:  PRPKRKAAHPYPQKASK

Q8RWU3 Protein REVEILLE 82.2e-2168.35Show/hide
Query:  FDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKIGQ
        FDRDWKKIE FVGSKTVIQ                 IRSHAQKYFLKV+K+GT  H+PPPRPKRKAAHPYPQKASK  Q
Subjt:  FDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKIGQ

Arabidopsis top hitse value%identityAlignment
AT1G01520.1 Homeodomain-like superfamily protein4.2e-2366.27Show/hide
Query:  FDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKIGQDSFN
        FDRDWKKI+AFVGSKTVIQ                 IRSHAQKYFLKV+K+GT EHLPPPRPKRKA HPYPQKA K    S N
Subjt:  FDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKIGQDSFN

AT5G02840.1 LHY/CCA1-like 14.2e-2365.48Show/hide
Query:  FDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKIGQDSFNL
        FDRDWKKIE FVGSKTVIQ                 IRSHAQKYFLKV+K+GT  H+PPPRPKRKAAHPYPQKASK  Q S ++
Subjt:  FDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKIGQDSFNL

AT5G02840.2 LHY/CCA1-like 14.2e-2365.48Show/hide
Query:  FDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKIGQDSFNL
        FDRDWKKIE FVGSKTVIQ                 IRSHAQKYFLKV+K+GT  H+PPPRPKRKAAHPYPQKASK  Q S ++
Subjt:  FDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKIGQDSFNL

AT5G52660.1 Homeodomain-like superfamily protein6.9e-2658.12Show/hide
Query:  AAPTSSREDLSKRARKRCSLFCSTGASGFMSGGIAL-VFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPP
        A  +SS EDLSK+ RK  ++  S  +         L     FDRDWKKIEAF+GSKTVIQ                 IRSHAQKYFLKV+KSGTGEHLPP
Subjt:  AAPTSSREDLSKRARKRCSLFCSTGASGFMSGGIAL-VFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPP

Query:  PRPKRKAAHPYPQKASK
        PRPKRKAAHPYPQKA K
Subjt:  PRPKRKAAHPYPQKASK

AT5G52660.2 Homeodomain-like superfamily protein6.9e-2658.12Show/hide
Query:  AAPTSSREDLSKRARKRCSLFCSTGASGFMSGGIAL-VFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPP
        A  +SS EDLSK+ RK  ++  S  +         L     FDRDWKKIEAF+GSKTVIQ                 IRSHAQKYFLKV+KSGTGEHLPP
Subjt:  AAPTSSREDLSKRARKRCSLFCSTGASGFMSGGIAL-VFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPP

Query:  PRPKRKAAHPYPQKASK
        PRPKRKAAHPYPQKA K
Subjt:  PRPKRKAAHPYPQKASK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTACCGTTCAACGCTGCTCCGACGTCGTCGAGGGAGGATCTTTCGAAGAGAGCTCGGAAACGCTGTTCTCTCTTCTGTTCGACTGGAGCTTCTGGATTCATGAG
CGGAGGCATTGCGCTTGTTTTCTCGAAGTTTGATCGAGACTGGAAGAAGATTGAGGCGTTTGTTGGATCCAAGACTGTCATTCAGATCTTGAAGAGGCTTGAGTACTTCA
AGCTTCGTCTCTCACTGAACATGATGATACGTAGCCATGCCCAGAAGTACTTCCTGAAGGTTGAGAAGAGTGGGACAGGTGAACACTTGCCTCCTCCTCGACCTAAGAGG
AAAGCTGCTCATCCATATCCTCAAAAAGCTTCAAAAATTGGTCAGGACAGCTTCAACCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTACCGTTCAACGCTGCTCCGACGTCGTCGAGGGAGGATCTTTCGAAGAGAGCTCGGAAACGCTGTTCTCTCTTCTGTTCGACTGGAGCTTCTGGATTCATGAG
CGGAGGCATTGCGCTTGTTTTCTCGAAGTTTGATCGAGACTGGAAGAAGATTGAGGCGTTTGTTGGATCCAAGACTGTCATTCAGATCTTGAAGAGGCTTGAGTACTTCA
AGCTTCGTCTCTCACTGAACATGATGATACGTAGCCATGCCCAGAAGTACTTCCTGAAGGTTGAGAAGAGTGGGACAGGTGAACACTTGCCTCCTCCTCGACCTAAGAGG
AAAGCTGCTCATCCATATCCTCAAAAAGCTTCAAAAATTGGTCAGGACAGCTTCAACCTCTAG
Protein sequenceShow/hide protein sequence
MALPFNAAPTSSREDLSKRARKRCSLFCSTGASGFMSGGIALVFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKR
KAAHPYPQKASKIGQDSFNL