CuGenDBv2

Gene ID	Carg22133
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function (DUF3464)
Genome location	Carg_Chr18:11491076..11491645
RNA-Seq Expression	Carg22133
Synteny	Carg22133
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021855 - PAM68-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6574203.1 putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. sororia]

4.4e-100

98.43

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Query:  MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGG--DDEIPEAVAKRIITRI
        MKALVCSFRHAL LSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGG  DDEIPEAVAKRIITRI
Subjt:  MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGG--DDEIPEAVAKRIITRI

Query:  LAFVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
        LAFVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
Subjt:  LAFVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN

KAG7013265.1 putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.1e-102

100

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Query:  MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDEIPEAVAKRIITRILA
        MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDEIPEAVAKRIITRILA
Subjt:  MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDEIPEAVAKRIITRILA

Query:  FVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
        FVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
Subjt:  FVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN

XP_022944901.1 uncharacterized protein PAM68-like [Cucurbita moschata]

3.4e-100

97.88

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Query:  MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDEIPEAVAKRIITRILA
        MKALVCSFRHAL LSKPPPWKQRSRIDDST TKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGG DDEIPEAVAKRIITRILA
Subjt:  MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDEIPEAVAKRIITRILA

Query:  FVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
        FVG+PMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
Subjt:  FVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN

XP_022968628.1 uncharacterized protein PAM68-like [Cucurbita maxima]

5.6e-95

95.24

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Query:  MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDEIPEAVAKRIITRILA
        MKALVCSFRHALDLSKPPPWKQRSRID+ST TKNLR+FT TSRGQIQLNAKGFTGSPATAKDRETAVKK S QNNSRD GG DDEIPEAVAKRIITRILA
Subjt:  MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDEIPEAVAKRIITRILA

Query:  FVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
        FVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGG+
Subjt:  FVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN

XP_023541387.1 uncharacterized protein PAM68-like [Cucurbita pepo subsp. pepo]

4.4e-100

98.42

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Query:  MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGG-DDEIPEAVAKRIITRIL
        MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSR GGGG DDEIPEAVAKRIITRIL
Subjt:  MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGG-DDEIPEAVAKRIITRIL

Query:  AFVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
        AFVG+PMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
Subjt:  AFVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AZ57 uncharacterized protein PAM68-like

1.5e-69

74.87

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Query:  MKALVCSFRHALDLSKPPPWKQRS-RIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDEIPEAVAKRIITRIL
        MK+  CSFR AL L KPPP  QR+  I+DST TKNL  FT TSRGQ+Q+NAKGFTGSPATAK+RETA K  SGQNN+ D    DDEIPEAV  RIITRIL
Subjt:  MKALVCSFRHALDLSKPPPWKQRS-RIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDEIPEAVAKRIITRIL

Query:  AFVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANR
        AFVGIPMAFGVTL+KI +A+ EQ LW VPIW+PF T FLTFGASTMGIAYGTLSTSLDPEK+G++ GW+EAQKNWVEMWKEEDE +R
Subjt:  AFVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANR

A0A5A7STB5 Putative Sterol regulatory element-binding protein cleavage-activating protein

1.5e-69

74.87

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Query:  MKALVCSFRHALDLSKPPPWKQRS-RIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDEIPEAVAKRIITRIL
        MK+  CSFR AL L KPPP  QR+  I+DST TKNL  FT TSRGQ+Q+NAKGFTGSPATAK+RETA K  SGQNN+ D    DDEIPEAV  RIITRIL
Subjt:  MKALVCSFRHALDLSKPPPWKQRS-RIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDEIPEAVAKRIITRIL

Query:  AFVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANR
        AFVGIPMAFGVTL+KI +A+ EQ LW VPIW+PF T FLTFGASTMGIAYGTLSTSLDPEK+G++ GW+EAQKNWVEMWKEEDE +R
Subjt:  AFVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANR

A0A6J1CGP3 uncharacterized protein PAM68-like

3.2e-72

74.19

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Query:  MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDEIPEAVAKRIITRILA
        MKAL+CS+R AL LS+PPPWK RSRI+DST TKNL   +R +RG +++NAKGFTG+PATAK+RE A +K SGQNNS      DDEI EAV+ RIITRILA
Subjt:  MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDEIPEAVAKRIITRILA

Query:  FVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANR
        FVG+PMAFGV L+KI E + EQK+W VPIWLPFLT FLTFGAST+GIAYGTLS SLDPEKEG+LFGW+EAQKNWVEMWKEEDEA+R
Subjt:  FVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANR

A0A6J1FZC0 uncharacterized protein PAM68-like

1.6e-100

97.88

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Query:  MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDEIPEAVAKRIITRILA
        MKALVCSFRHAL LSKPPPWKQRSRIDDST TKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGG DDEIPEAVAKRIITRILA
Subjt:  MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDEIPEAVAKRIITRILA

Query:  FVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
        FVG+PMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
Subjt:  FVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN

A0A6J1HYL3 uncharacterized protein PAM68-like

2.7e-95

95.24

Show/hide

Query:  MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDEIPEAVAKRIITRILA
        MKALVCSFRHALDLSKPPPWKQRSRID+ST TKNLR+FT TSRGQIQLNAKGFTGSPATAKDRETAVKK S QNNSRD GG DDEIPEAVAKRIITRILA
Subjt:  MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDEIPEAVAKRIITRILA

Query:  FVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
        FVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGG+
Subjt:  FVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN

SwissProt top hits

e value

%identity

Alignment

O49668 Protein PAM68, chloroplastic

5.4e-16

30.99

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Query:  KQRSRIDDSTATKNLRIFTRTSRGQIQLNA-KGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDE-----------IPEAVAKRIITRILAFVGIPMAF
        K +S++  S    N    +R +     +N+ KGF   P   K +++   KP  Q++  D    +D+           IPE V  R+I+R+   VG+P+  
Subjt:  KQRSRIDDSTATKNLRIFTRTSRGQIQLNA-KGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDE-----------IPEAVAKRIITRILAFVGIPMAF

Query:  GVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWK
        G+        +       VP W+PF+  F+ FG +  G++YG +S+S DP +EG+L GW+EA+KNW   W+
Subjt:  GVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWK

Q9LTD9 Uncharacterized protein PAM68-like

5.7e-26

36.76

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Query:  MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSR----GQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDEIPEAVAKRIIT
        M+AL+CS R         P    SR    T + N +     ++     ++    KGF  S  +        +KP   +   +    D  IP+ V +R++ 
Subjt:  MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSR----GQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDEIPEAVAKRIIT

Query:  RILAFVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEE
        RI+  VG P+  GV ++K+LE + ++ +W VP+W+P+LT  +TFG+S +GIAYG+LST+LDP K  +LFG  EA++NWVEMWKE+
Subjt:  RILAFVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEE

Arabidopsis top hits

e value

%identity

Alignment

AT4G19100.1 Protein of unknown function (DUF3464)

3.8e-17

30.99

Show/hide

Query:  KQRSRIDDSTATKNLRIFTRTSRGQIQLNA-KGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDE-----------IPEAVAKRIITRILAFVGIPMAF
        K +S++  S    N    +R +     +N+ KGF   P   K +++   KP  Q++  D    +D+           IPE V  R+I+R+   VG+P+  
Subjt:  KQRSRIDDSTATKNLRIFTRTSRGQIQLNA-KGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDE-----------IPEAVAKRIITRILAFVGIPMAF

Query:  GVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWK
        G+        +       VP W+PF+  F+ FG +  G++YG +S+S DP +EG+L GW+EA+KNW   W+
Subjt:  GVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWK

AT5G52780.1 Protein of unknown function (DUF3464)

4.1e-27

36.76

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Query:  MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSR----GQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDEIPEAVAKRIIT
        M+AL+CS R         P    SR    T + N +     ++     ++    KGF  S  +        +KP   +   +    D  IP+ V +R++ 
Subjt:  MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSR----GQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDEIPEAVAKRIIT

Query:  RILAFVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEE
        RI+  VG P+  GV ++K+LE + ++ +W VP+W+P+LT  +TFG+S +GIAYG+LST+LDP K  +LFG  EA++NWVEMWKE+
Subjt:  RILAFVGIPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEE

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAAGCTCTGGTGTGTTCCTTCCGGCACGCTCTCGACCTCTCAAAGCCTCCGCCATGGAAACAGAGAAGCCGAATTGATGACTCAACAGCCACCAAGAATCTCAGAAT
TTTCACAAGAACATCCCGAGGCCAGATCCAACTAAACGCCAAGGGTTTCACAGGTTCTCCGGCAACAGCGAAAGACAGAGAAACCGCCGTGAAAAAACCTTCCGGCCAAA
ACAATAGCAGAGACGGCGGCGGCGGCGACGATGAAATTCCAGAGGCCGTAGCCAAGAGGATCATAACGAGAATCTTGGCTTTCGTTGGAATTCCGATGGCGTTCGGCGTG
ACATTGGTGAAGATCTTAGAGGCGGTCCATGAGCAGAAACTTTGGCATGTTCCAATTTGGCTGCCGTTCTTGACGATTTTTTTGACATTTGGAGCTTCGACGATGGGAAT
CGCTTACGGGACGCTGTCGACGAGTTTGGATCCGGAGAAGGAAGGGACTCTGTTTGGATGGGATGAGGCGCAGAAGAATTGGGTTGAGATGTGGAAGGAGGAAGACGAAG
CCAATCGTGGAGGAAACTAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGGDDEIPEAVAKRIITRILAFVGIPMAFGV
TLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN

Carg22133 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome