CuGenDBv2

Gene ID	Carg22164
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	rRNA processing protein
Genome location	Carg_Chr08:2232535..2235544
RNA-Seq Expression	Carg22164
Synteny	Carg22164
Gene Ontology terms	NA
InterPro domains	IPR013730 - Fyv7/TAP26

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6593160.1 hypothetical protein SDJN03_12636, partial [Cucurbita argyrosperma subsp. sororia]

9.7e-95

100

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Query:  MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMN
        MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMN
Subjt:  MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMN

Query:  FENQTNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
        FENQTNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
Subjt:  FENQTNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH

XP_008451439.1 PREDICTED: uncharacterized protein LOC103492733 [Cucumis melo]

1.5e-79

87.96

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Query:  MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMN
        MKN  GK E + RSKSKFM  NKH N+KRLGGK  S +AFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQN QNERPSSS+VGLVEGENE  
Subjt:  MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMN

Query:  FENQTNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
        FENQTNGR G ERNKGVPSLQ LYERKH+EKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS NH
Subjt:  FENQTNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH

XP_022960530.1 uncharacterized protein LOC111461241 [Cucurbita moschata]

1.4e-93

98.95

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Query:  MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMN
        MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEM 
Subjt:  MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMN

Query:  FENQTNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
        FEN+TNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
Subjt:  FENQTNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH

XP_023004670.1 uncharacterized protein LOC111497895 [Cucurbita maxima]

2.9e-91

96.34

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Query:  MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMN
        MKNRAGKDEEQTRSKSKF K NKHKNMKRLGGKGPSPQAFANAKSTTDYYNPA IKKQREFYKNAKHVNKYKKLVKHQNNQNERPS+S+VGLVEGENEM 
Subjt:  MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMN

Query:  FENQTNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
        FEN+TNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
Subjt:  FENQTNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH

XP_023513566.1 uncharacterized protein LOC111778133 [Cucurbita pepo subsp. pepo]

2.9e-91

96.86

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Query:  MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMN
        MKNRAGKDEEQT SKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSS++GLVEGENEM 
Subjt:  MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMN

Query:  FENQTNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
        FENQTNGRRGNERNKGVPSLQGLYERKHQEKEKAR EKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS+NH
Subjt:  FENQTNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K7L3 Uncharacterized protein

2.6e-77

86.39

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Query:  MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMN
        MK+  GK E   RSKSKFM  NKH N+KRLGGKG S +AFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQN  NERPSSS+V LVEGENE  
Subjt:  MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMN

Query:  FENQTNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
        FENQTN R G ERNKGVPSLQ LYERKH+EKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS NH
Subjt:  FENQTNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH

A0A1S3BRH3 uncharacterized protein LOC103492733

7.3e-80

87.96

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Query:  MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMN
        MKN  GK E + RSKSKFM  NKH N+KRLGGK  S +AFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQN QNERPSSS+VGLVEGENE  
Subjt:  MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMN

Query:  FENQTNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
        FENQTNGR G ERNKGVPSLQ LYERKH+EKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS NH
Subjt:  FENQTNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH

A0A6J1GP14 uncharacterized protein LOC111455827

2.9e-76

84.74

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Query:  MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMN
        MK R G+DE Q R KS FMK  KHKNMKRLGGKG S +AFAN KSTTDYYNPALIKKQREFYKNAKHV+KYKKLVKHQN+ NERPSSS+VGLVEGEN   
Subjt:  MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMN

Query:  FENQTNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMN
         ENQTNGRRG ERNKG+PSLQ LYERKH+EKEKARMEKEAIIAAKKEE+ERAKARRN+TREKM KRTQKGQPVMKYRIEHLL+TIGASMN
Subjt:  FENQTNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMN

A0A6J1H9B9 uncharacterized protein LOC111461241

6.8e-94

98.95

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Query:  MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMN
        MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEM 
Subjt:  MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMN

Query:  FENQTNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
        FEN+TNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
Subjt:  FENQTNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH

A0A6J1KV89 uncharacterized protein LOC111497895

1.4e-91

96.34

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Query:  MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMN
        MKNRAGKDEEQTRSKSKF K NKHKNMKRLGGKGPSPQAFANAKSTTDYYNPA IKKQREFYKNAKHVNKYKKLVKHQNNQNERPS+S+VGLVEGENEM 
Subjt:  MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMN

Query:  FENQTNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
        FEN+TNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH
Subjt:  FENQTNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G03180.1 CONTAINS InterPro DOMAIN/s: rRNA processing (InterPro:IPR013730); Has 898 Blast hits to 687 proteins in 142 species: Archae - 2; Bacteria - 28; Metazoa - 200; Fungi - 99; Plants - 63; Viruses - 0; Other Eukaryotes - 506 (source: NCBI BLink).

5.2e-30

45.11

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Query:  KDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQN--NQNERPSSSSVGLVEGENEMNFENQ
        ++ +    KSK  +  K KNM+RLGG G S Q FAN KS  + YNP+LIKKQ+EFYKNAK+V+K++K +K QN  ++NE   +S VG          ++ 
Subjt:  KDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQN--NQNERPSSSSVGLVEGENEMNFENQ

Query:  TNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS
         + +R  + NK +  ++ LY++  +E E+ R E+EA+  AKKE +E A++RR   + KM ++T+ GQPVMKYRIEHLLE+I  S
Subjt:  TNGRRGNERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAGAACCGAGCTGGAAAAGACGAAGAACAGACTCGCTCGAAATCGAAGTTCATGAAGGCTAATAAACACAAGAACATGAAACGATTGGGAGGGAAGGGCCCTTCGCC
CCAGGCGTTTGCGAATGCGAAATCAACTACTGATTACTATAATCCAGCTTTGATAAAGAAGCAAAGAGAGTTCTATAAGAATGCTAAACATGTCAACAAGTATAAGAAGT
TGGTAAAGCATCAGAATAATCAGAATGAGAGGCCATCTAGCTCATCTGTTGGACTTGTCGAGGGTGAAAATGAAATGAATTTCGAGAATCAGACGAATGGAAGACGTGGG
AACGAAAGGAATAAAGGCGTACCTAGTCTCCAGGGACTGTATGAGAGAAAGCATCAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATTGCTGCAAAAAAGGA
AGAACGAGAAAGAGCTAAAGCTAGAAGAAACTCCACGAGGGAGAAAATGTTCAAAAGGACACAAAAAGGGCAGCCAGTTATGAAGTACCGAATTGAGCATCTTTTGGAGA
CCATTGGCGCCTCAATGAACCACTGA

mRNA sequence

Show/hide mRNA sequence

AACTTCTCTGTCTCTTGGCATCTGTTTCCTCTTCCTTCTCTGTGTTTTTGCCCTAATTGTTCTCAGTTTCAATCAATCTCTCTGCAAATTTTTCTTTCCAACGATGAAGA
ACCGAGCTGGAAAAGACGAAGAACAGACTCGCTCGAAATCGAAGTTCATGAAGGCTAATAAACACAAGAACATGAAACGATTGGGAGGGAAGGGCCCTTCGCCCCAGGCG
TTTGCGAATGCGAAATCAACTACTGATTACTATAATCCAGCTTTGATAAAGAAGCAAAGAGAGTTCTATAAGAATGCTAAACATGTCAACAAGTATAAGAAGTTGGTAAA
GCATCAGAATAATCAGAATGAGAGGCCATCTAGCTCATCTGTTGGACTTGTCGAGGGTGAAAATGAAATGAATTTCGAGAATCAGACGAATGGAAGACGTGGGAACGAAA
GGAATAAAGGCGTACCTAGTCTCCAGGGACTGTATGAGAGAAAGCATCAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATTGCTGCAAAAAAGGAAGAACGA
GAAAGAGCTAAAGCTAGAAGAAACTCCACGAGGGAGAAAATGTTCAAAAGGACACAAAAAGGGCAGCCAGTTATGAAGTACCGAATTGAGCATCTTTTGGAGACCATTGG
CGCCTCAATGAACCACTGAGGACTTTGTGAAACAAAATTTTGTTCGCTTTAGTATGTATATTTCCCTTGTACCTTCTAGTTTGCTTCATTTTACAATCAAATTCTAAGGA
TTCATGGAAATGATACACGTGCCGTCGATTTGTAGGTGTTTTTTTATGGCGTTCATCAACGTGTAGGAGAGGAGAGACTCAAACTTTGATCCCTTCATATAAGGTATATG
TCTTAACTAATTGAATTATGCTTCGTTTATCTAAAGTTAGGTGTTGAAACTCGACGAATATCTGAACTACTTAGGTGGCATTCAATACTATCCATTAGATTCTTTAACAA
TCTCGTAACCAAGAATCTAAGTTTCATAGGACAGGACATGGTTTACTTTGATTACCAAGTACTCCGTTTATCGTGCATAGATAGATCTACATACACACAAACACAAATTG
TTCGAATGTTCGAGATGCACCAATCACGAGCAAGTTCCAATAGAATTGGAATGACATGTTCGGGATGAAAAAACTCAGCATCTCATCTACTCCCTTTATCATGCATAGAT
AGATCTA

Protein sequence

Show/hide protein sequence

MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMNFENQTNGRRG
NERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH

Carg22164 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome