; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg22172 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22172
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRNA-binding protein BRN1-like
Genome locationCarg_Chr08:2180725..2185796
RNA-Seq ExpressionCarg22172
SyntenyCarg22172
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR002343 - Paraneoplastic encephalomyelitis antigen
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593153.1 RNA-binding protein BRN1, partial [Cucurbita argyrosperma subsp. sororia]1.6e-131100Show/hide
Query:  MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD
        MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD
Subjt:  MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD

Query:  GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA
        GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA
Subjt:  GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA

Query:  QSLASLNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ
        QSLASLNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ
Subjt:  QSLASLNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ

KAG7025552.1 RNA-binding protein BRN1 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-131100Show/hide
Query:  MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD
        MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD
Subjt:  MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD

Query:  GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA
        GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA
Subjt:  GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA

Query:  QSLASLNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ
        QSLASLNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ
Subjt:  QSLASLNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ

XP_022959930.1 RNA-binding protein BRN1-like [Cucurbita moschata]1.2e-12999.59Show/hide
Query:  MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD
        MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD
Subjt:  MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD

Query:  GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA
        GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA
Subjt:  GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA

Query:  QSLASLNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ
        QSLA LNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ
Subjt:  QSLASLNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ

XP_023004542.1 RNA-binding protein BRN1-like [Cucurbita maxima]2.4e-13098.76Show/hide
Query:  MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD
        MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD
Subjt:  MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD

Query:  GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA
        GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPL+VKWADTEKERQARKAQKA
Subjt:  GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA

Query:  QSLASLNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ
        QSLASLNADPQHPSLFG MPLGYIPPYNGYGYQAPGSYGL+Q
Subjt:  QSLASLNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ

XP_023514644.1 RNA-binding protein BRN1-like [Cucurbita pepo subsp. pepo]1.6e-131100Show/hide
Query:  MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD
        MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD
Subjt:  MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD

Query:  GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA
        GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA
Subjt:  GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA

Query:  QSLASLNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ
        QSLASLNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ
Subjt:  QSLASLNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ

TrEMBL top hitse value%identityAlignment
A0A0A0K5R5 Uncharacterized protein1.3e-11890.65Show/hide
Query:  MAEESR--EERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKY
        MAE SR  E ++ S++EEEDSVKLFVGQVPKHMTE QLL MFQEFALVDEVNII+DKTTRASRGCCFVICPSRQEADKAVNACH+KKTLPGASSPLQVKY
Subjt:  MAEESR--EERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKY

Query:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQ
        ADGELERLEHKLFIGMLPKNVSEDEVSGLF+QYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGK KMEGSSVPLVVKWADTEKERQARKAQ
Subjt:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQ

Query:  KAQSLAS--LNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ
        KAQS A+  LNAD QHPSLFG MPLGY+PPYNGYGYQAPGSYGL+Q
Subjt:  KAQSLAS--LNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ

A0A1S3BRF9 RNA-binding protein BRN11.3e-11890.65Show/hide
Query:  MAEESR--EERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKY
        MAE SR  E ++ S++EEEDSVKLFVGQVPKHMTE QLL MFQEFALVDEVNII+DKTTRASRGCCFVICPSRQEADKAVNACH+KKTLPGASSPLQVKY
Subjt:  MAEESR--EERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKY

Query:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQ
        ADGELERLEHKLFIGMLPKNVSEDEVSGLF+QYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGK KMEGSSVPLVVKWADTEKERQARKAQ
Subjt:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQ

Query:  KAQSLAS--LNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ
        KAQS A+  LNAD QHPSLFG MPLGY+PPYNGYGYQAPGSYGL+Q
Subjt:  KAQSLAS--LNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ

A0A6J1GP82 RNA-binding protein BRN1-like2.9e-11892.83Show/hide
Query:  ERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYADGELERLE
        ERKGSS+EEEDSVKLFVGQVPKHMTE QLLAMFQEFALVDEVNII+DKTTRASRGCCFVICPSRQEADKA+NACH+KKTLPGASSPLQVKYADGELERLE
Subjt:  ERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYADGELERLE

Query:  HKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKAQSLAS--
        HKLFIGMLPKNVSEDEVS LF+QYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGK+KMEGSSVPLVVKWADTEKERQARKAQKAQS AS  
Subjt:  HKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKAQSLAS--

Query:  LNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ
        LNAD Q  SLFG +PLGYIPPYNGYGYQAPGSYGL+Q
Subjt:  LNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ

A0A6J1H7P3 RNA-binding protein BRN1-like5.7e-13099.59Show/hide
Query:  MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD
        MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD
Subjt:  MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD

Query:  GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA
        GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA
Subjt:  GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA

Query:  QSLASLNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ
        QSLA LNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ
Subjt:  QSLASLNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ

A0A6J1KQQ6 RNA-binding protein BRN1-like1.1e-13098.76Show/hide
Query:  MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD
        MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD
Subjt:  MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD

Query:  GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA
        GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPL+VKWADTEKERQARKAQKA
Subjt:  GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA

Query:  QSLASLNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ
        QSLASLNADPQHPSLFG MPLGYIPPYNGYGYQAPGSYGL+Q
Subjt:  QSLASLNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYGLVQ

SwissProt top hitse value%identityAlignment
A0JM51 CUGBP Elav-like family member 52.8e-4142.93Show/hide
Query:  RKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYADGELERLEH
        ++  S ++ D++KLFVGQ+P+++ E  L  +F++F  + E+ ++KD+ T   +GC F+   +R  A KA  A H +KTLPG + P+QVK AD E    + 
Subjt:  RKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYADGELERLEH

Query:  KLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQK
        KLF+GML K  SE+EV+ +F  +G+I++  +LRG   +SKGCAF+K+ +  +A AA++A++G   M G+S  LVVK+ADT+KER  R+ Q+
Subjt:  KLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQK

Q6DGV1 CUGBP Elav-like family member 41.2e-4145.41Show/hide
Query:  EEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYADGELERLEHKLFIGM
        ++ D++KLF+GQ+P+++ E  L  +F+EF  + E+ ++KD+ T   +GC F+   +R+ A KA  A H +KTLPG + P+QVK AD E    + KLF+GM
Subjt:  EEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYADGELERLEHKLFIGM

Query:  LPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQK
        L K   ED+V  LF  +G+I++  ILRG    SKGCAF+KY T  +A AA+ A++G   M G+S  LVVK+ADT+KER  R+ Q+
Subjt:  LPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQK

Q8GZ26 RNA-binding protein BRN28.8e-9673.78Show/hide
Query:  EEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYADGELERLEHKLFIGM
        E E+ VKLFVGQVPKHMTE QLL +F+EF++V+EVNIIK+KTTRA RGCCF+ CP+R++ADK +N+ H+KKTLPGASSPLQVKYADGELERLEHKLF+GM
Subjt:  EEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYADGELERLEHKLFIGM

Query:  LPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKAQSLASLNADPQHPS
        LPKNVSE EV  LF++YGTIKDLQILRGS QTSKGC FLKYE+K+QAVAA+EA+NG++ MEG++VPL+VKWADTEKERQAR+  K QS  S   DPQ+PS
Subjt:  LPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKAQSLASLNADPQHPS

Query:  LFGGMPLGYIPPYNGYGYQAPGSYG
        +FG +P+ Y+PPYNGYGY  PG+YG
Subjt:  LFGGMPLGYIPPYNGYGYQAPGSYG

Q8LFS6 RNA-binding protein BRN16.3e-10276.86Show/hide
Query:  MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD
        MAE   E R+    EEE+SVKLFVGQ+PKHM+E QLL +FQEFA+VDEVNIIKDK TRASRGCCF++CPSR+EADK VNACH+KKTLPGA+S LQVKYAD
Subjt:  MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD

Query:  GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA
        GELERLEHKLF+GMLPKNVSE EV  LF++YGTIKDLQILRG+QQTSKGCAFLKYETK+QAV+A+E+INGK+KMEGS+VPLVVKWADTE+ER  R+ QKA
Subjt:  GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA

Query:  QS-LASL-NADPQHPSLFGGMPLGYIPPYNGYGY-QAPGSYG
        QS +A L N DP +PSLFG +P+GY+PPYNGYGY Q PG+YG
Subjt:  QS-LASL-NADPQHPSLFGGMPLGYIPPYNGYGY-QAPGSYG

Q9IBD1 CUGBP Elav-like family member 33.6e-4145.21Show/hide
Query:  EEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYADGELERLEHKLFIGM
        +E D++KLF+GQ+P+++ E  L  +F++F  + E+ +IKDK T   +GC F+   +R+ A KA NA H +KTLPG + P+QVK AD E  R + KLF+GM
Subjt:  EEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYADGELERLEHKLFIGM

Query:  LPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKAQS
        L K +S+ +V  +F  +G+I++  +LRG    SKGCAF+KY++  +A AA+ A++G   + G+S  LVVK+ADTEKER  R+ Q+  S
Subjt:  LPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKAQS

Arabidopsis top hitse value%identityAlignment
AT1G03457.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.3e-9773.78Show/hide
Query:  EEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYADGELERLEHKLFIGM
        E E+ VKLFVGQVPKHMTE QLL +F+EF++V+EVNIIK+KTTRA RGCCF+ CP+R++ADK +N+ H+KKTLPGASSPLQVKYADGELERLEHKLF+GM
Subjt:  EEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYADGELERLEHKLFIGM

Query:  LPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKAQSLASLNADPQHPS
        LPKNVSE EV  LF++YGTIKDLQILRGS QTSKGC FLKYE+K+QAVAA+EA+NG++ MEG++VPL+VKWADTEKERQAR+  K QS  S   DPQ+PS
Subjt:  LPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKAQSLASLNADPQHPS

Query:  LFGGMPLGYIPPYNGYGYQAPGSYG
        +FG +P+ Y+PPYNGYGY  PG+YG
Subjt:  LFGGMPLGYIPPYNGYGYQAPGSYG

AT1G03457.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-9470.94Show/hide
Query:  EEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYADGELERL--------
        E E+ VKLFVGQVPKHMTE QLL +F+EF++V+EVNIIK+KTTRA RGCCF+ CP+R++ADK +N+ H+KKTLPGASSPLQVKYADGELERL        
Subjt:  EEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYADGELERL--------

Query:  -EHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKAQSLAS
         EHKLF+GMLPKNVSE EV  LF++YGTIKDLQILRGS QTSKGC FLKYE+K+QAVAA+EA+NG++ MEG++VPL+VKWADTEKERQAR+  K QS  S
Subjt:  -EHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKAQSLAS

Query:  LNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYG
           DPQ+PS+FG +P+ Y+PPYNGYGY  PG+YG
Subjt:  LNADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYG

AT4G03110.1 RNA-binding protein-defense related 14.5e-10376.86Show/hide
Query:  MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD
        MAE   E R+    EEE+SVKLFVGQ+PKHM+E QLL +FQEFA+VDEVNIIKDK TRASRGCCF++CPSR+EADK VNACH+KKTLPGA+S LQVKYAD
Subjt:  MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD

Query:  GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA
        GELERLEHKLF+GMLPKNVSE EV  LF++YGTIKDLQILRG+QQTSKGCAFLKYETK+QAV+A+E+INGK+KMEGS+VPLVVKWADTE+ER  R+ QKA
Subjt:  GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA

Query:  QS-LASL-NADPQHPSLFGGMPLGYIPPYNGYGY-QAPGSYG
        QS +A L N DP +PSLFG +P+GY+PPYNGYGY Q PG+YG
Subjt:  QS-LASL-NADPQHPSLFGGMPLGYIPPYNGYGY-QAPGSYG

AT4G03110.2 RNA-binding protein-defense related 16.9e-10476.76Show/hide
Query:  MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD
        MAE   E R+    EEE+SVKLFVGQ+PKHM+E QLL +FQEFA+VDEVNIIKDK TRASRGCCF++CPSR+EADK VNACH+KKTLPGA+S LQVKYAD
Subjt:  MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYAD

Query:  GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA
        GELERLEHKLF+GMLPKNVSE EV  LF++YGTIKDLQILRG+QQTSKGCAFLKYETK+QAV+A+E+INGK+KMEGS+VPLVVKWADTE+ER  R+ QKA
Subjt:  GELERLEHKLFIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA

Query:  QS-LASL-NADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYG
        QS +A L N DP +PSLFG +P+GY+PPYNGYGY  PG+YG
Subjt:  QS-LASL-NADPQHPSLFGGMPLGYIPPYNGYGYQAPGSYG

AT4G16280.2 RNA binding;abscisic acid binding1.7e-4141.8Show/hide
Query:  EEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYADGELER---LEHKLF
        +   +VKLFVG VP+  TE+++   F++   V EV +IKDK T   +GCCFV   + ++AD+A+ A H++ TLPG + P+QV+YADGE ER   LE KLF
Subjt:  EEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYADGELER---LEHKLF

Query:  IGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA
        +G L K  +E EV  +F Q+G ++D+ ++R   + S+GC F+KY +K+ A+AA++ +NG Y M G + PL+V++A+ ++ +     + A
Subjt:  IGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGGAGAGTAGAGAAGAGAGAAAAGGAAGTAGTAAGGAGGAGGAAGACAGCGTCAAACTCTTTGTTGGACAAGTGCCGAAGCATATGACGGAAGATCAACTTCT
GGCAATGTTCCAAGAGTTTGCACTTGTGGACGAGGTCAACATCATCAAAGACAAGACCACTCGCGCCTCTAGAGGTTGCTGTTTTGTGATATGTCCTTCGAGGCAAGAGG
CGGATAAGGCGGTCAATGCTTGCCATAGCAAGAAAACTTTGCCTGGGGCTTCTAGTCCGTTGCAAGTAAAGTATGCAGATGGAGAGCTGGAAAGACTAGAACATAAACTC
TTTATTGGGATGCTTCCAAAAAACGTATCCGAGGATGAAGTTTCTGGTCTTTTCGCTCAATATGGAACGATAAAAGACTTACAAATCTTAAGAGGTTCACAGCAGACAAG
TAAAGGTTGTGCATTTTTGAAGTATGAGACGAAGGATCAAGCTGTTGCAGCACTCGAGGCAATTAATGGGAAGTATAAAATGGAGGGATCCAGTGTCCCTTTGGTTGTTA
AATGGGCTGACACAGAGAAGGAAAGGCAGGCTCGAAAGGCTCAGAAAGCTCAATCGCTGGCCTCTCTTAATGCAGACCCCCAACATCCTTCACTATTTGGAGGAATGCCG
CTGGGTTATATTCCGCCATATAATGGCTATGGTTATCAGGCACCGGGAAGTTATGGGCTTGTGCAATAA
mRNA sequenceShow/hide mRNA sequence
TGAAGAAAAATCCAATCTAAGAGAGAGAAGTGACGGCCAAAACTAGAGCGAAAGAGAGAGAAAGCTTGAAGCCGGCATTAATGGCGGAGGAGAGTAGAGAAGAGAGAAAA
GGAAGTAGTAAGGAGGAGGAAGACAGCGTCAAACTCTTTGTTGGACAAGTGCCGAAGCATATGACGGAAGATCAACTTCTGGCAATGTTCCAAGAGTTTGCACTTGTGGA
CGAGGTCAACATCATCAAAGACAAGACCACTCGCGCCTCTAGAGGTTGCTGTTTTGTGATATGTCCTTCGAGGCAAGAGGCGGATAAGGCGGTCAATGCTTGCCATAGCA
AGAAAACTTTGCCTGGGGCTTCTAGTCCGTTGCAAGTAAAGTATGCAGATGGAGAGCTGGAAAGACTAGAACATAAACTCTTTATTGGGATGCTTCCAAAAAACGTATCC
GAGGATGAAGTTTCTGGTCTTTTCGCTCAATATGGAACGATAAAAGACTTACAAATCTTAAGAGGTTCACAGCAGACAAGTAAAGGTTGTGCATTTTTGAAGTATGAGAC
GAAGGATCAAGCTGTTGCAGCACTCGAGGCAATTAATGGGAAGTATAAAATGGAGGGATCCAGTGTCCCTTTGGTTGTTAAATGGGCTGACACAGAGAAGGAAAGGCAGG
CTCGAAAGGCTCAGAAAGCTCAATCGCTGGCCTCTCTTAATGCAGACCCCCAACATCCTTCACTATTTGGAGGAATGCCGCTGGGTTATATTCCGCCATATAATGGCTAT
GGTTATCAGGCACCGGGAAGTTATGGGCTTGTGCAATAATCAATCTGGTTTCCCAAATATAATACCCCAAGGTAATGCAATGCGTGGGATCCCACCTGATCTGAGCCCAG
GTATGGTCAATAGGAATTATGGCATGCCTCCAGCAAATTACGTTGGCTCCGCCTATCCTGCAGTTCCAGGTCTTCAGCATCCCATGGCATACCCTGGAGGAATGATGAGT
CCTGGGGCTGTTAGCAGTTCACCTGGTTCAGGGCCACTTCCTGGTGGGAAGAATAACTCTCCAATATCTAGTTTCGGTAAAGGCTCGGGGAGTCAAATTGAAGGTAGTTA
TTTCTGTTCCTTCCAGACCTTGATTTACTGATTGGTTTGAGTTTCTGGGAATCACGGCTTACTATTTTTTCCTCTCTAGGTCCCCCTGGTGCCAATCTTTTTATTTATCA
CATACCTCAAGAATATGGTGACCTGGAGCTTGCTAATTCTTTTCGAGCTTTTGGCCAAGTTTTGAGTGCTAAAGTATTTGTTGACAAAACATCTGGAGCTAGCAAATGTT
TTGGGTTTGTGAGTTACGATTCCGCTGAGGCTGCTCAATCTGCGATTAGTATGATGAATGGATTCCAATTAGGTGGAAAGAAATTAAAAGTTCAGCTGAAGAGAGACAAC
AAACAGAGTAAACAATATTGATTCTTCGTAAGACAAGCGAAGTTGATGGACCGTGCTTACATGGGGAGGATGGGGGGGGGGGGGGCCCTAAATGCATGACATTTATTCCA
TTATTAACTCATCTTAGGGTGGATTTGGGACGGTCTATGGTTAAAATTCATTACTCCATTCTGCCTGTGATTGCATCATCAGATGAAATCAAAGATACTCGTAATTCATG
GTTCGGCCCTGTCGATACAGTTTGTAATTTATATATTATGGAAGATTAACATTCTTTAATTGATTCTTCCAGGACATCTGTTGATTGTATGTATAATACAGTGTAATTAT
AAATGATCTCCTGATTCTTTTAGGTTTATTGATTTGATATTTGCTGAATTTGATGGGTTATTCTGGTTACTTGTGTTTTCTTTAAGAAAACCATATCTAGCTAGCAGTAT
TGTGTGTAGTGCTTTCAATCATACATCTATTTTTTTCTGGAACAAGCAGTTGAAACAGCAAGTTTGAGAGCATTAAAGGTATGCTGCTATTGAATATTATTATGTAAATT
TTGTCAAACTTCATTGGAAGCATGCTTGTGTATGAAAAGATTAGGATCTATTTGTTTATCTGTAATTGTGTTGGGCAAGTTATAATCTTGTGTTCTTGTGCAGAAA
Protein sequenceShow/hide protein sequence
MAEESREERKGSSKEEEDSVKLFVGQVPKHMTEDQLLAMFQEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHSKKTLPGASSPLQVKYADGELERLEHKL
FIGMLPKNVSEDEVSGLFAQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKYKMEGSSVPLVVKWADTEKERQARKAQKAQSLASLNADPQHPSLFGGMP
LGYIPPYNGYGYQAPGSYGLVQ