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Carg22173 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg22173
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGlutamic acid-rich protein
Genome locationCarg_Chr08:2175065..2175475
RNA-Seq ExpressionCarg22173
SyntenyCarg22173
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593152.1 hypothetical protein SDJN03_12628, partial [Cucurbita argyrosperma subsp. sororia]1.8e-6394.37Show/hide
Query:  MLFNFHPHCDDFSSYLLFEASGDSEVDSLADLEGSTATLNLVEFNDAKSCTEVEFNDAESCTDDTLDLYDEFLRDENESEAE------EEEDEEMFENDG
        MLFNFHPH DDFSSYLLFEASGDSEVDSLADLEGSTATLNLVEFNDAKSCT+VEFNDAESCTDDTLDLYDEFLRDENESEAE      EEEDEEMFENDG
Subjt:  MLFNFHPHCDDFSSYLLFEASGDSEVDSLADLEGSTATLNLVEFNDAKSCTEVEFNDAESCTDDTLDLYDEFLRDENESEAE------EEEDEEMFENDG

Query:  VVESKAIGFTTSSSASIDSTKEFKMLNDVEKNRLFWETCLAS
        VVESKAIGFTTSSSASIDSTKEFKMLNDVEKNRLFWETCLAS
Subjt:  VVESKAIGFTTSSSASIDSTKEFKMLNDVEKNRLFWETCLAS

KAG7025551.1 hypothetical protein SDJN02_12047, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-67100Show/hide
Query:  MLFNFHPHCDDFSSYLLFEASGDSEVDSLADLEGSTATLNLVEFNDAKSCTEVEFNDAESCTDDTLDLYDEFLRDENESEAEEEEDEEMFENDGVVESKA
        MLFNFHPHCDDFSSYLLFEASGDSEVDSLADLEGSTATLNLVEFNDAKSCTEVEFNDAESCTDDTLDLYDEFLRDENESEAEEEEDEEMFENDGVVESKA
Subjt:  MLFNFHPHCDDFSSYLLFEASGDSEVDSLADLEGSTATLNLVEFNDAKSCTEVEFNDAESCTDDTLDLYDEFLRDENESEAEEEEDEEMFENDGVVESKA

Query:  IGFTTSSSASIDSTKEFKMLNDVEKNRLFWETCLAS
        IGFTTSSSASIDSTKEFKMLNDVEKNRLFWETCLAS
Subjt:  IGFTTSSSASIDSTKEFKMLNDVEKNRLFWETCLAS

XP_022960478.1 uncharacterized protein LOC111461201 [Cucurbita moschata]9.4e-5284.03Show/hide
Query:  MLFNFHP------HCDDFSSYLLFEASGDSEVDSLADLEGSTATLNLVEFNDAKSCTEVEFNDAESCTDDTLDLYDEFLRDENESEAE--EEEDEEMFEN
        MLFNFHP      H DDFSSYLLFEASGDSEVDSLADLEGSTA LNL           VEF+DAESCTDDTLDLYDEFLRDENESEAE  E+EDEEMFEN
Subjt:  MLFNFHP------HCDDFSSYLLFEASGDSEVDSLADLEGSTATLNLVEFNDAKSCTEVEFNDAESCTDDTLDLYDEFLRDENESEAE--EEEDEEMFEN

Query:  DGVVESKAIGFTTSSSASIDSTKEFKMLNDVEKNRLFWETCLAS
        DGVVESKAIGFTTSSSASIDSTKEFKMLNDVEKNRLFWETCLAS
Subjt:  DGVVESKAIGFTTSSSASIDSTKEFKMLNDVEKNRLFWETCLAS

XP_023004684.1 uncharacterized protein LOC111497906 isoform X1 [Cucurbita maxima]5.9e-5484.14Show/hide
Query:  MLFNFHP------HCDDFSSYLLFEASGDSEVDSLADLEGSTATLNLVEFNDAKSCTEVEFNDAESCTDDTLDLYDEFLRDENESEAEEEEDE---EMFE
        MLFNFHP      H DDFSSYLLFEASGDSEV    DL GSTATLNLVEFNDAKSCT+VEFNDAESCTDDT DLYDEF+RDENESEAEE+++E   E FE
Subjt:  MLFNFHP------HCDDFSSYLLFEASGDSEVDSLADLEGSTATLNLVEFNDAKSCTEVEFNDAESCTDDTLDLYDEFLRDENESEAEEEEDE---EMFE

Query:  NDGVVESKAIGFTTSSSASIDSTKEFKMLNDVEKNRLFWETCLAS
        NDGVVESKAIGFTTSSSASIDSTK+FKMLNDVEKNRLFWETCLAS
Subjt:  NDGVVESKAIGFTTSSSASIDSTKEFKMLNDVEKNRLFWETCLAS

XP_023513847.1 uncharacterized protein LOC111778329 [Cucurbita pepo subsp. pepo]2.7e-4679.31Show/hide
Query:  MLFNFHP------HCDDFSSYLLFEASGDSEVDSLADLEGS-TATLNLVEFNDAKSCTEVEFNDAESCTDDTLDLYDEFLRDENESEAEEEEDEE--MFE
        MLFNFHP      H DDFSSYLLFEASGDSEVDSLADL GS T TLNL           VEFNDAESCTDDT DLYDE +R ENESEAEE+EDE+   FE
Subjt:  MLFNFHP------HCDDFSSYLLFEASGDSEVDSLADLEGS-TATLNLVEFNDAKSCTEVEFNDAESCTDDTLDLYDEFLRDENESEAEEEEDEE--MFE

Query:  NDGVVESKAIGFTTSSSASIDSTKEFKMLNDVEKNRLFWETCLAS
        NDGVVESKAIGFTTSSSASIDSTKEFKMLNDVEKNRLFWETCLAS
Subjt:  NDGVVESKAIGFTTSSSASIDSTKEFKMLNDVEKNRLFWETCLAS

TrEMBL top hitse value%identityAlignment
A0A5A7UVG0 Glutamic acid-rich protein3.6e-2551.28Show/hide
Query:  MLFNFHP---------HCDDFSSYLLFEASGDSEVDSLADLEGSTATLNLVEFNDAKSCTEVEFNDAESCTDDTLDLYDEFLRDENESEAEEEEDEEMFE
        + FNF+P         H +D SSY LFEA+GDSE DS  DLE S+            S +  EFNDAESCTDDT  +      +ENE + ++ + EEM E
Subjt:  MLFNFHP---------HCDDFSSYLLFEASGDSEVDSLADLEGSTATLNLVEFNDAKSCTEVEFNDAESCTDDTLDLYDEFLRDENESEAEEEEDEEMFE

Query:  NDG----------VVESKAIGFTTSSSASIDSTK-EFKMLNDVEKNRLFWETCLAS
        ND           VVESKAIGF+  S+ASIDSTK +FKMLN+V+KNRLFWETCLAS
Subjt:  NDG----------VVESKAIGFTTSSSASIDSTK-EFKMLNDVEKNRLFWETCLAS

A0A6J1H932 uncharacterized protein LOC1114612014.6e-5284.03Show/hide
Query:  MLFNFHP------HCDDFSSYLLFEASGDSEVDSLADLEGSTATLNLVEFNDAKSCTEVEFNDAESCTDDTLDLYDEFLRDENESEAE--EEEDEEMFEN
        MLFNFHP      H DDFSSYLLFEASGDSEVDSLADLEGSTA LNL           VEF+DAESCTDDTLDLYDEFLRDENESEAE  E+EDEEMFEN
Subjt:  MLFNFHP------HCDDFSSYLLFEASGDSEVDSLADLEGSTATLNLVEFNDAKSCTEVEFNDAESCTDDTLDLYDEFLRDENESEAE--EEEDEEMFEN

Query:  DGVVESKAIGFTTSSSASIDSTKEFKMLNDVEKNRLFWETCLAS
        DGVVESKAIGFTTSSSASIDSTKEFKMLNDVEKNRLFWETCLAS
Subjt:  DGVVESKAIGFTTSSSASIDSTKEFKMLNDVEKNRLFWETCLAS

A0A6J1JVN0 uncharacterized protein LOC1114882646.6e-2756.83Show/hide
Query:  FNFHP-----HCDDFSSYLLFEASGDSEVDSLADLEGSTATLNLVEFNDAKSCTEVEFNDAESCTDDTLDLYDEFLRDENESEAEEEEDEEMFENDGVVE
        FNFHP     H +DFSS+LLFEA+GDSE DSL     ST +              VEFNDAESCTDDT  + +EF   EN    ++++D++  END  VE
Subjt:  FNFHP-----HCDDFSSYLLFEASGDSEVDSLADLEGSTATLNLVEFNDAKSCTEVEFNDAESCTDDTLDLYDEFLRDENESEAEEEEDEEMFENDGVVE

Query:  SKAIGFTTSSSASIDSTKEFKMLNDVEKNRLFWETCLAS
        SK IGF T SSASIDS +EFKMLN+V+KNRLFWETCLAS
Subjt:  SKAIGFTTSSSASIDSTKEFKMLNDVEKNRLFWETCLAS

A0A6J1KST6 uncharacterized protein LOC111497906 isoform X21.4e-4577.24Show/hide
Query:  MLFNFHP------HCDDFSSYLLFEASGDSEVDSLADLEGSTATLNLVEFNDAKSCTEVEFNDAESCTDDTLDLYDEFLRDENESEAEEEEDE---EMFE
        MLFNFHP      H DDFSSYLLFEASGDSEV    DL GSTATLNL           VEFNDAESCTDDT DLYDEF+RDENESEAEE+++E   E FE
Subjt:  MLFNFHP------HCDDFSSYLLFEASGDSEVDSLADLEGSTATLNLVEFNDAKSCTEVEFNDAESCTDDTLDLYDEFLRDENESEAEEEEDE---EMFE

Query:  NDGVVESKAIGFTTSSSASIDSTKEFKMLNDVEKNRLFWETCLAS
        NDGVVESKAIGFTTSSSASIDSTK+FKMLNDVEKNRLFWETCLAS
Subjt:  NDGVVESKAIGFTTSSSASIDSTKEFKMLNDVEKNRLFWETCLAS

A0A6J1KX07 uncharacterized protein LOC111497906 isoform X12.9e-5484.14Show/hide
Query:  MLFNFHP------HCDDFSSYLLFEASGDSEVDSLADLEGSTATLNLVEFNDAKSCTEVEFNDAESCTDDTLDLYDEFLRDENESEAEEEEDE---EMFE
        MLFNFHP      H DDFSSYLLFEASGDSEV    DL GSTATLNLVEFNDAKSCT+VEFNDAESCTDDT DLYDEF+RDENESEAEE+++E   E FE
Subjt:  MLFNFHP------HCDDFSSYLLFEASGDSEVDSLADLEGSTATLNLVEFNDAKSCTEVEFNDAESCTDDTLDLYDEFLRDENESEAEEEEDE---EMFE

Query:  NDGVVESKAIGFTTSSSASIDSTKEFKMLNDVEKNRLFWETCLAS
        NDGVVESKAIGFTTSSSASIDSTK+FKMLNDVEKNRLFWETCLAS
Subjt:  NDGVVESKAIGFTTSSSASIDSTKEFKMLNDVEKNRLFWETCLAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTTCAACTTCCATCCTCACTGTGATGATTTTTCATCTTACTTGCTCTTCGAGGCATCTGGTGACTCGGAGGTCGACTCCCTGGCTGACCTTGAAGGCTCAACTGC
CACCCTGAATTTGGTGGAGTTTAACGATGCTAAATCTTGCACGGAGGTGGAGTTTAACGATGCTGAATCTTGCACGGATGATACTCTTGATTTGTATGATGAATTTTTGA
GAGATGAAAATGAGAGTGAAGCGGAGGAGGAGGAGGACGAGGAGATGTTTGAGAATGATGGGGTGGTGGAAAGCAAGGCAATTGGATTCACAACAAGCTCAAGTGCTTCA
ATTGATTCAACTAAGGAGTTCAAAATGCTTAATGATGTGGAAAAAAACAGGTTGTTTTGGGAGACTTGTTTGGCATCATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCTTCAACTTCCATCCTCACTGTGATGATTTTTCATCTTACTTGCTCTTCGAGGCATCTGGTGACTCGGAGGTCGACTCCCTGGCTGACCTTGAAGGCTCAACTGC
CACCCTGAATTTGGTGGAGTTTAACGATGCTAAATCTTGCACGGAGGTGGAGTTTAACGATGCTGAATCTTGCACGGATGATACTCTTGATTTGTATGATGAATTTTTGA
GAGATGAAAATGAGAGTGAAGCGGAGGAGGAGGAGGACGAGGAGATGTTTGAGAATGATGGGGTGGTGGAAAGCAAGGCAATTGGATTCACAACAAGCTCAAGTGCTTCA
ATTGATTCAACTAAGGAGTTCAAAATGCTTAATGATGTGGAAAAAAACAGGTTGTTTTGGGAGACTTGTTTGGCATCATAG
Protein sequenceShow/hide protein sequence
MLFNFHPHCDDFSSYLLFEASGDSEVDSLADLEGSTATLNLVEFNDAKSCTEVEFNDAESCTDDTLDLYDEFLRDENESEAEEEEDEEMFENDGVVESKAIGFTTSSSAS
IDSTKEFKMLNDVEKNRLFWETCLAS